RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 CLEC4GQ6UXB4 293 aa12.87□□□□□ -0.35
TUBD1-215ENST00000593110 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
TUBD1-215ENST00000593110 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
TUBD1-215ENST00000593110 IL17REQ8NFR9 667 aa12.87□□□□□ -0.35
TUBD1-215ENST00000593110 NPHP1O15259 732 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 CA12O43570 354 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 BRPF1P55201 1214 aaPredicted RBP12.86□□□□□ -0.35
TUBD1-215ENST00000593110 GRM1Q13255 1194 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 SAPCD2Q86UD0 394 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 POLR3GLQ9BT43 218 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 PCDHB3Q9Y5E6 796 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
TUBD1-215ENST00000593110 KCNQ3O43525 872 aa12.85□□□□□ -0.35
TUBD1-215ENST00000593110 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
TUBD1-215ENST00000593110 SSTR3P32745 418 aaPredicted RBP12.85□□□□□ -0.35
TUBD1-215ENST00000593110 PIP4K2AP48426 406 aaPredicted RBP12.85□□□□□ -0.35
TUBD1-215ENST00000593110 CRY2Q49AN0 593 aa12.85□□□□□ -0.35
TUBD1-215ENST00000593110 USP50Q70EL3 339 aaPredicted RBP12.85□□□□□ -0.35
TUBD1-215ENST00000593110 HHIPL1Q96JK4 782 aa12.85□□□□□ -0.35
TUBD1-215ENST00000593110 FMNL2Q96PY5 1086 aa12.85□□□□□ -0.35
TUBD1-215ENST00000593110 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
TUBD1-215ENST00000593110 GCGRP47871 477 aa12.84□□□□□ -0.35
TUBD1-215ENST00000593110 DGKZQ13574 1117 aa12.84□□□□□ -0.35
TUBD1-215ENST00000593110 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
TUBD1-215ENST00000593110 ZIC5Q96T25 663 aa12.83□□□□□ -0.36
TUBD1-215ENST00000593110 PLA2G2EQ9NZK7 142 aa12.83□□□□□ -0.36
TUBD1-215ENST00000593110 USP16Q9Y5T5 823 aa12.83□□□□□ -0.36
TUBD1-215ENST00000593110 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
TUBD1-215ENST00000593110 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
TUBD1-215ENST00000593110 TEFQ10587 303 aa12.82□□□□□ -0.36
TUBD1-215ENST00000593110 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
TUBD1-215ENST00000593110 MTRQ99707 1265 aa12.82□□□□□ -0.36
TUBD1-215ENST00000593110 NIP7Q9Y221 180 aaKnown RBP eCLIP12.82□□□□□ -0.36
TUBD1-215ENST00000593110 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 CELF2O95319 508 aaKnown RBP12.81□□□□□ -0.36
TUBD1-215ENST00000593110 PRKCSHP14314 528 aaPredicted RBP12.81□□□□□ -0.36
TUBD1-215ENST00000593110 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 COPS2P61201 443 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 CIAPIN1Q6FI81 312 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
TUBD1-215ENST00000593110 TPTE2Q6XPS3 522 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 ZNF652Q9Y2D9 606 aa12.81□□□□□ -0.36
TUBD1-215ENST00000593110 GNAT3A8MTJ3 354 aa12.8□□□□□ -0.36
TUBD1-215ENST00000593110 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
TUBD1-215ENST00000593110 PRPF38BQ5VTL8 546 aaKnown RBP12.8□□□□□ -0.36
TUBD1-215ENST00000593110 CC2D2BQ6DHV5 1058 aa12.8□□□□□ -0.36
TUBD1-215ENST00000593110 GLIS2Q9BZE0 524 aaPredicted RBP12.8□□□□□ -0.36
TUBD1-215ENST00000593110 IL21Q9HBE4 155 aa12.8□□□□□ -0.36
TUBD1-215ENST00000593110 ADARB2Q9NS39 739 aaKnown RBP12.8□□□□□ -0.36
TUBD1-215ENST00000593110 GPRC5DQ9NZD1 345 aa12.8□□□□□ -0.36
TUBD1-215ENST00000593110 NUP98P52948 1817 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 SOX10P56693 466 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 HLFQ16534 295 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 LARGE2Q8N3Y3 721 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 GAS2L2Q8NHY3 880 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 KIF7Q2M1P5 1343 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
TUBD1-215ENST00000593110 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
TUBD1-215ENST00000593110 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
TUBD1-215ENST00000593110 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
TUBD1-215ENST00000593110 KDM4AO75164 1064 aa12.78□□□□□ -0.36
TUBD1-215ENST00000593110 HSPA5P11021 654 aaKnown RBP12.78□□□□□ -0.36
TUBD1-215ENST00000593110 KCNC4Q03721 635 aa12.78□□□□□ -0.36
TUBD1-215ENST00000593110 FUT2Q10981 343 aa12.78□□□□□ -0.36
TUBD1-215ENST00000593110 BLOC1S3Q6QNY0 202 aa12.78□□□□□ -0.36
TUBD1-215ENST00000593110 NPM2Q86SE8 214 aaKnown RBP12.78□□□□□ -0.36
TUBD1-215ENST00000593110 BTBD11A6QL63 1104 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 MS4A1P11836 297 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 HIRAP54198 1017 aaPredicted RBP12.77□□□□□ -0.37
TUBD1-215ENST00000593110 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 CDHR2Q9BYE9 1310 aa12.77□□□□□ -0.37
TUBD1-215ENST00000593110 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.37
TUBD1-215ENST00000593110 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-215ENST00000593110 CXCL9Q07325 125 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 NOGQ13253 232 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 PUS10Q3MIT2 529 aaKnown RBP12.76□□□□□ -0.37
TUBD1-215ENST00000593110 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 TRPM4Q8TD43 1214 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 SAGE1Q9NXZ1 904 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 UBN2Q6ZU65 1347 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 DUOX1Q9NRD9 1551 aa12.76□□□□□ -0.37
TUBD1-215ENST00000593110 HTTP42858 3142 aa12.75□□□□□ -0.37
TUBD1-215ENST00000593110 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-215ENST00000593110 NR1I2O75469 434 aa12.75□□□□□ -0.37
TUBD1-215ENST00000593110 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
TUBD1-215ENST00000593110 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
TUBD1-215ENST00000593110 USP46P62068 366 aa12.75□□□□□ -0.37
TUBD1-215ENST00000593110 AOC3Q16853 763 aa12.75□□□□□ -0.37
TUBD1-215ENST00000593110 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
TUBD1-215ENST00000593110 PPIP5K2O43314 1243 aa12.74□□□□□ -0.37
TUBD1-215ENST00000593110 NEUROD2Q15784 382 aa12.74□□□□□ -0.37
TUBD1-215ENST00000593110 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
TUBD1-215ENST00000593110 CRAMP1Q96RY5 1269 aa12.74□□□□□ -0.37
TUBD1-215ENST00000593110 RTFDC1Q9BY42 306 aaPredicted RBP12.74□□□□□ -0.37
TUBD1-215ENST00000593110 LAMB2P55268 1798 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms