RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 RIC3Q7Z5B4 369 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 CCDC191Q8NCU4 936 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 ARMC5Q96C12 935 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 MED23Q9ULK4 1368 aa13.17□□□□□ -0.3
SMCO4P1-201ENST00000592909 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 ZBTB48P10074 688 aaPredicted RBP13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 PRKG1Q13976 671 aa13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 COA1Q9GZY4 146 aa13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 ANGEL1Q9UNK9 670 aaKnown RBP13.16□□□□□ -0.3
SMCO4P1-201ENST00000592909 UNCXA6NJT0 531 aa13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 SASH1O94885 1247 aa13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 EN2P19622 333 aaPredicted RBP13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 ZBED3Q96IU2 234 aaPredicted RBP13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 BSDC1Q9NW68 430 aaPredicted RBP13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
SMCO4P1-201ENST00000592909 IGF2BP3O00425 579 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 DUSP27Q5VZP5 1158 aa13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 WNK4Q96J92 1243 aa13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 CDC5LQ99459 802 aaKnown RBP13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 MYD88Q99836 296 aa13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
SMCO4P1-201ENST00000592909 PSME4Q14997 1843 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 CCT4P50991 539 aaKnown RBP13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 NEUROD2Q15784 382 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 TTLL5Q6EMB2 1281 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 JARID2Q92833 1246 aaPredicted RBP13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 DEFB129Q9H1M3 183 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 EFCC1Q9HA90 598 aa13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
SMCO4P1-201ENST00000592909 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 CD99L2Q8TCZ2 262 aa13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 TMEM106CQ9BVX2 250 aa13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 PHAXQ9H814 394 aaKnown RBP13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 FZD1Q9UP38 647 aa13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 LEMD3Q9Y2U8 911 aa13.12□□□□□ -0.31
SMCO4P1-201ENST00000592909 COL1A1P02452 1464 aaPredicted RBP13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 TESPA1A2RU30 521 aaPredicted RBP13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 CTSWP56202 376 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 SP3Q02447 781 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 CRHR2Q13324 411 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 TXNRD3Q86VQ6 643 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 ZNF333Q96JL9 665 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 CLMNQ96JQ2 1002 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 METTL22Q9BUU2 404 aaPredicted RBP13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 PPP2R3BQ9Y5P8 575 aa13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
SMCO4P1-201ENST00000592909 CAP1Q01518 475 aa13.1□□□□□ -0.31
SMCO4P1-201ENST00000592909 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
SMCO4P1-201ENST00000592909 PTPN18Q99952 460 aa13.1□□□□□ -0.31
SMCO4P1-201ENST00000592909 HTTP42858 3142 aa13.09□□□□□ -0.31
SMCO4P1-201ENST00000592909 GJA5P36382 358 aa13.09□□□□□ -0.31
SMCO4P1-201ENST00000592909 DLGAP5Q15398 846 aa13.09□□□□□ -0.31
SMCO4P1-201ENST00000592909 GREM2Q9H772 168 aa13.09□□□□□ -0.31
SMCO4P1-201ENST00000592909 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
SMCO4P1-201ENST00000592909 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 GTF2IP78347 998 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 ARHGEF6Q15052 776 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 OTUD5Q96G74 571 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 TRIOBPQ9H2D6 2365 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 ZNF804BA4D1E1 1349 aa13.08□□□□□ -0.32
SMCO4P1-201ENST00000592909 SSC5DA1L4H1 1573 aa13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 USP2O75604 605 aaPredicted RBP13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 KLRK1P26718 216 aa13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 ANKRD13AQ8IZ07 590 aa13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 ANKRD2Q9GZV1 360 aa13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.07□□□□□ -0.32
SMCO4P1-201ENST00000592909 H0YGN5 161 aa13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 IGKV5-2P06315 115 aa13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 IGHMBP2P38935 993 aaKnown RBP13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 RALBP1Q15311 655 aa13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 SLC9C1Q4G0N8 1177 aa13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 NBPF12Q5TAG4 269 aaPredicted RBP13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 MS4A4AQ96JQ5 239 aa13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 CEP290O15078 2479 aa13.06□□□□□ -0.32
SMCO4P1-201ENST00000592909 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
SMCO4P1-201ENST00000592909 MYO1BO43795 1136 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms