RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 SMARCC2Q8TAQ2 1214 aa19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 MYH3P11055 1940 aa19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 SYTL4Q96C24 671 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 SPATA32Q96LK8 384 aa19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 GREM2Q9H772 168 aa19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 RIPOR2Q9Y4F9 1068 aa19.57■□□□□ 0.72
PRKCSH-217ENST00000592741 COL16A1Q07092 1604 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 COL22A1Q8NFW1 1626 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 IRS4O14654 1257 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 GIMAP6Q6P9H5 292 aa19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 LDHAL6AQ6ZMR3 332 aa19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 SYNE4Q8N205 404 aa19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 DDX11Q96FC9 970 aa19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 ZSCAN16Q9H4T2 348 aaPredicted RBP19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
PRKCSH-217ENST00000592741 HCLS1P14317 486 aaPredicted RBP19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 ZAP70P43403 619 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 RESTQ13127 1097 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 APPBP2Q92624 585 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 CHMP4CQ96CF2 233 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 FUCA2Q9BTY2 467 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 ANO8Q9HCE9 1232 aaPredicted RBP19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 CNNM1Q9NRU3 951 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 TRMT112Q9UI30 125 aaKnown RBP19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 GOLGA6L4A6NEF3 574 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 ERVV-1B6SEH8 477 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 SCARF1Q14162 830 aa19.55■□□□□ 0.72
PRKCSH-217ENST00000592741 NUP98P52948 1817 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 A0A0G2JLW4 131 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 MCM5P33992 734 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 IMMTQ16891 758 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 NSUN7Q8NE18 718 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 LEO1Q8WVC0 666 aaPredicted RBP19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 MYH7P12883 1935 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 ROBO1Q9Y6N7 1651 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 PDE8AO60658 829 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.54■□□□□ 0.723e-7■■■□□ 14.7
PRKCSH-217ENST00000592741 ZKSCAN5Q9Y2L8 839 aa19.54■□□□□ 0.72
PRKCSH-217ENST00000592741 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 DOT1LQ8TEK3 1739 aa19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 PTPDC1A2A3K4 754 aa19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 PTMAP06454 111 aaKnown RBP19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 NAA16Q6N069 864 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 ZNF274Q96GC6 653 aaPredicted RBP19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 NUP62CLQ9H1M0 184 aa19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 TFIP11Q9UBB9 837 aaKnown RBP19.53■□□□□ 0.72
PRKCSH-217ENST00000592741 ZSCAN25Q6NSZ9 544 aa19.52■□□□□ 0.72
PRKCSH-217ENST00000592741 ZNF512BQ96KM6 892 aaPredicted RBP19.52■□□□□ 0.72
PRKCSH-217ENST00000592741 CCDC192P0DO97 292 aa19.52■□□□□ 0.72
PRKCSH-217ENST00000592741 FBXL16Q8N461 479 aa19.52■□□□□ 0.72
PRKCSH-217ENST00000592741 NAP1L2Q9ULW6 460 aaPredicted RBP19.52■□□□□ 0.72
PRKCSH-217ENST00000592741 NWD2Q9ULI1 1742 aa19.52■□□□□ 0.71
PRKCSH-217ENST00000592741 CTDNEP1O95476 244 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 LIG1P18858 919 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 MAP3K11Q16584 847 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 CFAP45Q9UL16 551 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 KAT6BQ8WYB5 2073 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 FOXP2O15409 715 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 ZNF500O60304 480 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 PDIA3P30101 505 aaKnown RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 MCAMP43121 646 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 TTF1Q15361 905 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 PI16Q6UXB8 463 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 VGLL2Q8N8G2 317 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 CDCA7Q9BWT1 371 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 DDX19AQ9NUU7 478 aaKnown RBP19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 USP25Q9UHP3 1055 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
PRKCSH-217ENST00000592741 CHST3Q7LGC8 479 aa19.5■□□□□ 0.71
PRKCSH-217ENST00000592741 PUS7LQ9H0K6 701 aaKnown RBP19.5■□□□□ 0.71
PRKCSH-217ENST00000592741 LRP5O75197 1615 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 GPAA1O43292 621 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 PDE8BO95263 885 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 FGAP02671 866 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 ZNF34Q8IZ26 560 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 AK7Q96M32 723 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 AKAP11Q9UKA4 1901 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 UBN2Q6ZU65 1347 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 SALL1Q9NSC2 1324 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 MYH15Q9Y2K3 1946 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 HAND2P61296 217 aa19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 NCOA5Q9HCD5 579 aaKnown RBP19.49■□□□□ 0.71
PRKCSH-217ENST00000592741 ADD2P35612 726 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 EVCP57679 992 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 TNMDQ9H2S6 317 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 DACT1Q9NYF0 836 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 ATRNO75882 1429 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 KDM4AO75164 1064 aa19.48■□□□□ 0.71
PRKCSH-217ENST00000592741 ADCY5O95622 1261 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms