RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 HTRA3P83110 453 aa19.69■□□□□ 0.74
LIG3-215ENST00000592690 LRRC24Q50LG9 513 aa19.69■□□□□ 0.74
LIG3-215ENST00000592690 MAP1SQ66K74 1059 aaPredicted RBP19.69■□□□□ 0.74
LIG3-215ENST00000592690 USP50Q70EL3 339 aaPredicted RBP19.69■□□□□ 0.74
LIG3-215ENST00000592690 MICALL2Q8IY33 904 aa19.69■□□□□ 0.74
LIG3-215ENST00000592690 CNOT7Q9UIV1 285 aaKnown RBP19.69■□□□□ 0.74
LIG3-215ENST00000592690 RIPOR2Q9Y4F9 1068 aa19.69■□□□□ 0.74
LIG3-215ENST00000592690 ZNF609O15014 1411 aa19.68■□□□□ 0.74
LIG3-215ENST00000592690 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
LIG3-215ENST00000592690 TMEM57Q8N5G2 664 aa19.68■□□□□ 0.74
LIG3-215ENST00000592690 TRPM4Q8TD43 1214 aa19.68■□□□□ 0.74
LIG3-215ENST00000592690 DPF2Q92785 391 aa19.68■□□□□ 0.74
LIG3-215ENST00000592690 COA1Q9GZY4 146 aa19.68■□□□□ 0.74
LIG3-215ENST00000592690 MYH13Q9UKX3 1938 aa19.67■□□□□ 0.74
LIG3-215ENST00000592690 USP17L3A6NCW0 530 aa19.67■□□□□ 0.74
LIG3-215ENST00000592690 USP17L4A6NCW7 530 aa19.67■□□□□ 0.74
LIG3-215ENST00000592690 C15orf52Q6ZUT6 534 aaKnown RBP19.67■□□□□ 0.74
LIG3-215ENST00000592690 USP17L1Q7RTZ2 530 aa19.67■□□□□ 0.74
LIG3-215ENST00000592690 ITGBL1O95965 494 aaPredicted RBP19.66■□□□□ 0.74
LIG3-215ENST00000592690 HIRAP54198 1017 aaPredicted RBP19.66■□□□□ 0.74
LIG3-215ENST00000592690 RSBN1LQ6PCB5 846 aaPredicted RBP19.66■□□□□ 0.74
LIG3-215ENST00000592690 MROH5Q6ZUA9 1318 aa19.66■□□□□ 0.74
LIG3-215ENST00000592690 PASKQ96RG2 1323 aa19.66■□□□□ 0.74
LIG3-215ENST00000592690 ARAP2Q8WZ64 1704 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 H7C1D1 291 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 EGFRP00533 1210 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 GNAI3P08754 354 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 RLBP1P12271 317 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 PTPN12Q05209 780 aaKnown RBP19.65■□□□□ 0.74
LIG3-215ENST00000592690 SAMD7Q7Z3H4 446 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 CNTROBQ8N137 903 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 FBXW7Q969H0 707 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 MXD3Q9BW11 206 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 CD209Q9NNX6 404 aa19.65■□□□□ 0.74
LIG3-215ENST00000592690 UBE4AQ14139 1066 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 METTL24Q5JXM2 366 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 DACT2Q5SW24 774 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 VGLL2Q8N8G2 317 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 AGBL3Q8NEM8 1001 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 GMLQ99445 158 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 HDAC5Q9UQL6 1122 aa19.64■□□□□ 0.73
LIG3-215ENST00000592690 EYA2O00167 538 aa19.63■□□□□ 0.73
LIG3-215ENST00000592690 TBC1D10BQ4KMP7 808 aaPredicted RBP19.63■□□□□ 0.73
LIG3-215ENST00000592690 ZNF804AQ7Z570 1209 aa19.63■□□□□ 0.73
LIG3-215ENST00000592690 FTSJ3Q8IY81 847 aaKnown RBP19.63■□□□□ 0.73
LIG3-215ENST00000592690 DZIP1LQ8IYY4 767 aaKnown RBP19.63■□□□□ 0.73
LIG3-215ENST00000592690 GTF2IP78347 998 aa19.62■□□□□ 0.73
LIG3-215ENST00000592690 RBM26Q5T8P6 1007 aaKnown RBP19.62■□□□□ 0.73
LIG3-215ENST00000592690 STRIP1Q5VSL9 837 aa19.62■□□□□ 0.73
LIG3-215ENST00000592690 ATG9AQ7Z3C6 839 aa19.62■□□□□ 0.73
LIG3-215ENST00000592690 SIL1Q9H173 461 aa19.62■□□□□ 0.73
LIG3-215ENST00000592690 PA2G4Q9UQ80 394 aaKnown RBP19.62■□□□□ 0.73
LIG3-215ENST00000592690 ECM29Q5VYK3 1845 aa19.61■□□□□ 0.73
LIG3-215ENST00000592690 PDE8BO95263 885 aa19.61■□□□□ 0.73
LIG3-215ENST00000592690 GYG1P46976 350 aa19.61■□□□□ 0.73
LIG3-215ENST00000592690 FMR1Q06787 632 aaKnown RBP eCLIP19.61■□□□□ 0.735e-6■■■■□ 22.9
LIG3-215ENST00000592690 TTLL5Q6EMB2 1281 aa19.61■□□□□ 0.73
LIG3-215ENST00000592690 PGAP2Q9UHJ9 254 aa19.61■□□□□ 0.73
LIG3-215ENST00000592690 GNAI2P04899 355 aa19.6■□□□□ 0.73
LIG3-215ENST00000592690 IL1R1P14778 569 aa19.6■□□□□ 0.73
LIG3-215ENST00000592690 ZNF280AP59817 542 aaPredicted RBP19.6■□□□□ 0.73
LIG3-215ENST00000592690 KIF4BQ2VIQ3 1234 aa19.6■□□□□ 0.73
LIG3-215ENST00000592690 ITPRIPQ8IWB1 547 aa19.6■□□□□ 0.73
LIG3-215ENST00000592690 DNAJC5GQ8N7S2 189 aa19.6■□□□□ 0.73
LIG3-215ENST00000592690 MYO3BQ8WXR4 1341 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 TRAF5O00463 557 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 USP17L8P0C7I0 530 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 MTX1Q13505 466 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 PANK1Q8TE04 598 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 ZC3H15Q8WU90 426 aaKnown RBP19.59■□□□□ 0.73
LIG3-215ENST00000592690 FAM84BQ96KN1 310 aaPredicted RBP19.59■□□□□ 0.73
LIG3-215ENST00000592690 GLIS2Q9BZE0 524 aaPredicted RBP19.59■□□□□ 0.73
LIG3-215ENST00000592690 COPRSQ9NQ92 184 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 RCAN3Q9UKA8 241 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 JAG2Q9Y219 1238 aa19.59■□□□□ 0.73
LIG3-215ENST00000592690 ASTN2O75129 1339 aaPredicted RBP19.58■□□□□ 0.73
LIG3-215ENST00000592690 SRGAP3O43295 1099 aa19.58■□□□□ 0.72
LIG3-215ENST00000592690 CERS5Q8N5B7 392 aa19.58■□□□□ 0.72
LIG3-215ENST00000592690 FBXO3Q9UK99 471 aa19.58■□□□□ 0.72
LIG3-215ENST00000592690 CIAO1O76071 339 aa19.57■□□□□ 0.72
LIG3-215ENST00000592690 FGFR2P21802 821 aa19.57■□□□□ 0.72
LIG3-215ENST00000592690 HIBADHP31937 336 aaKnown RBP19.57■□□□□ 0.72
LIG3-215ENST00000592690 PUM3Q15397 648 aaKnown RBP19.57■□□□□ 0.72
LIG3-215ENST00000592690 TDRD7Q8NHU6 1098 aaKnown RBP19.57■□□□□ 0.72
LIG3-215ENST00000592690 MYOZ2Q9NPC6 264 aa19.57■□□□□ 0.72
LIG3-215ENST00000592690 CREBZFQ9NS37 354 aa19.57■□□□□ 0.72
LIG3-215ENST00000592690 PNMA6EA0A0J9YXQ4 647 aa19.56■□□□□ 0.72
LIG3-215ENST00000592690 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
LIG3-215ENST00000592690 KIAA0825Q8IV33 1275 aa19.56■□□□□ 0.72
LIG3-215ENST00000592690 C1orf115Q9H7X2 142 aa19.56■□□□□ 0.72
LIG3-215ENST00000592690 TMEM88BA6NKF7 163 aa19.55■□□□□ 0.72
LIG3-215ENST00000592690 ZBTB7BO15156 539 aaPredicted RBP19.55■□□□□ 0.72
LIG3-215ENST00000592690 DLK2Q6UY11 383 aa19.55■□□□□ 0.72
LIG3-215ENST00000592690 KLRG1Q96E93 195 aa19.55■□□□□ 0.72
LIG3-215ENST00000592690 GGA3Q9NZ52 723 aa19.55■□□□□ 0.72
LIG3-215ENST00000592690 IQSEC3Q9UPP2 1182 aaPredicted RBP19.55■□□□□ 0.72
LIG3-215ENST00000592690 SASH1O94885 1247 aa19.54■□□□□ 0.72
LIG3-215ENST00000592690 IL15P40933 162 aaPredicted RBP19.54■□□□□ 0.72
LIG3-215ENST00000592690 SCARF1Q14162 830 aa19.54■□□□□ 0.72
LIG3-215ENST00000592690 YTHDC1Q96MU7 727 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms