RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 ARID5BQ14865 1188 aa17.39■□□□□ 0.37
SMARCA4-219ENST00000592604 SECISBP2LQ93073 1101 aaKnown RBP17.39■□□□□ 0.37
SMARCA4-219ENST00000592604 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
SMARCA4-219ENST00000592604 AXIN2Q9Y2T1 843 aa17.39■□□□□ 0.37
SMARCA4-219ENST00000592604 CCZ1BP86790 482 aa17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 DDX46Q7L014 1031 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 AFDNP55196 1824 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 PTPN14Q15678 1187 aa17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 DDX41Q9UJV9 622 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-219ENST00000592604 CCDC69A6NI79 296 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 USP27XA6NNY8 438 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 KDM6AO15550 1401 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 NAA30Q147X3 362 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 CEP57L1Q8IYX8 460 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 CASP7P55210 303 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 UBE3BQ7Z3V4 1068 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 ILDR1Q86SU0 546 aaPredicted RBP17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 FSIP1Q8NA03 581 aa17.37■□□□□ 0.37
SMARCA4-219ENST00000592604 MORC2Q9Y6X9 1032 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 FMR1NBQ8N0W7 255 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 CCAR2Q8N163 923 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 FBXL16Q8N461 479 aa17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 ZNF496Q96IT1 587 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 NAT10Q9H0A0 1025 aaKnown RBP17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 OSBPL5Q9H0X9 879 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-219ENST00000592604 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 GSDMDP57764 484 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 ZMYM1Q5SVZ6 1142 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 ADALQ6DHV7 355 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 A0A1W2PQ27 194 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 A0A1W2PQ64 194 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 A0A1W2PQD8 194 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 E7EWF7 191 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 ME1P48163 572 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 ZNF592Q92610 1267 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 RBM33Q96EV2 1170 aaKnown RBP17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
SMARCA4-219ENST00000592604 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 CCT2P78371 535 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 IMPACTQ9P2X3 320 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 PCDHA7Q9UN72 937 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 A0A087WZG4 1122 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 VGLL3A8MV65 326 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 KIF2AO00139 706 aaPredicted RBP17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 ABCC6O95255 1503 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 ERBB3P21860 1342 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 EVCP57679 992 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 TMEM94Q12767 1356 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 FILIP1Q7Z7B0 1213 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 MRPS27Q92552 414 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 PAG1Q9NWQ8 432 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 ARFGEF2Q9Y6D5 1785 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 FOSBP53539 338 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 KIF18AQ8NI77 898 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 BPIFA3Q9BQP9 254 aa17.34■□□□□ 0.37
SMARCA4-219ENST00000592604 CARMIL3Q8ND23 1372 aa17.33■□□□□ 0.37
SMARCA4-219ENST00000592604 PHKG2P15735 406 aa17.33■□□□□ 0.37
SMARCA4-219ENST00000592604 GABPB1Q06547 395 aaPredicted RBP17.33■□□□□ 0.37
SMARCA4-219ENST00000592604 NBPF11Q86T75 865 aa17.33■□□□□ 0.37
SMARCA4-219ENST00000592604 NCOA5Q9HCD5 579 aaKnown RBP17.33■□□□□ 0.37
SMARCA4-219ENST00000592604 ZNF215Q9UL58 517 aaPredicted RBP17.33■□□□□ 0.37
SMARCA4-219ENST00000592604 FDPSP14324 419 aaKnown RBP17.33■□□□□ 0.36
SMARCA4-219ENST00000592604 ZNF397Q8NF99 534 aaPredicted RBP17.33■□□□□ 0.36
SMARCA4-219ENST00000592604 ERO1AQ96HE7 468 aa17.33■□□□□ 0.36
SMARCA4-219ENST00000592604 A0A087WWV3 80 aa17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 GOLIM4O00461 696 aa17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 ATG9AQ7Z3C6 839 aa17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 RAPGEF4Q8WZA2 1011 aa17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 ORAI2Q96SN7 254 aa17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMARCA4-219ENST00000592604 TRPM3Q9HCF6 1732 aaPredicted RBP17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 LINC00301Q8NCQ3 95 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 KIAA1468Q9P260 1216 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 FOXO4P98177 505 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 SLFNL1Q499Z3 407 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 PLBD2Q8NHP8 589 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 SDF4Q9BRK5 362 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 ATP5J2-PTCD1G3V325 749 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 H7C1W4 665 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 TEX2Q8IWB9 1127 aa17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 TRMT1Q9NXH9 659 aaKnown RBP17.31■□□□□ 0.36
SMARCA4-219ENST00000592604 SPEF2Q9C093 1822 aa17.3■□□□□ 0.36
SMARCA4-219ENST00000592604 KCNJ6P48051 423 aa17.3■□□□□ 0.36
SMARCA4-219ENST00000592604 KMT5BQ4FZB7 885 aa17.3■□□□□ 0.36
SMARCA4-219ENST00000592604 FAM53CQ9NYF3 392 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms