RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 WTIPA6NIX2 430 aaPredicted RBP25.33■■□□□ 1.65
PRKCSH-216ENST00000592445 SREBF2Q12772 1141 aa25.33■■□□□ 1.65
PRKCSH-216ENST00000592445 METTL22Q9BUU2 404 aaPredicted RBP25.33■■□□□ 1.65
PRKCSH-216ENST00000592445 MED23Q9ULK4 1368 aa25.32■■□□□ 1.64
PRKCSH-216ENST00000592445 WNT10BO00744 389 aa25.32■■□□□ 1.64
PRKCSH-216ENST00000592445 CTSWP56202 376 aa25.32■■□□□ 1.64
PRKCSH-216ENST00000592445 DACT2Q5SW24 774 aa25.32■■□□□ 1.64
PRKCSH-216ENST00000592445 FBXO46Q6PJ61 603 aaPredicted RBP25.32■■□□□ 1.64
PRKCSH-216ENST00000592445 MYO3BQ8WXR4 1341 aa25.32■■□□□ 1.64
PRKCSH-216ENST00000592445 ZNF853P0CG23 659 aa25.31■■□□□ 1.64
PRKCSH-216ENST00000592445 NOM1Q5C9Z4 860 aaKnown RBP25.31■■□□□ 1.64
PRKCSH-216ENST00000592445 BSDC1Q9NW68 430 aaPredicted RBP25.31■■□□□ 1.64
PRKCSH-216ENST00000592445 MINPP1Q9UNW1 487 aa25.31■■□□□ 1.64
PRKCSH-216ENST00000592445 SASH1O94885 1247 aa25.3■■□□□ 1.64
PRKCSH-216ENST00000592445 GNAI1P63096 354 aa25.3■■□□□ 1.64
PRKCSH-216ENST00000592445 PRKG1Q13976 671 aa25.3■■□□□ 1.64
PRKCSH-216ENST00000592445 STRIP1Q5VSL9 837 aa25.3■■□□□ 1.64
PRKCSH-216ENST00000592445 ARMC9Q7Z3E5 817 aa25.3■■□□□ 1.64
PRKCSH-216ENST00000592445 IFT57Q9NWB7 429 aa25.3■■□□□ 1.64
PRKCSH-216ENST00000592445 FKTNO75072 461 aa25.29■■□□□ 1.64
PRKCSH-216ENST00000592445 CCT4P50991 539 aaKnown RBP25.29■■□□□ 1.64
PRKCSH-216ENST00000592445 PTPN12Q05209 780 aaKnown RBP25.29■■□□□ 1.64
PRKCSH-216ENST00000592445 COA1Q9GZY4 146 aa25.29■■□□□ 1.64
PRKCSH-216ENST00000592445 MAP3K2Q9Y2U5 619 aa25.29■■□□□ 1.64
PRKCSH-216ENST00000592445 CALD1Q05682 793 aaKnown RBP25.28■■□□□ 1.64
PRKCSH-216ENST00000592445 TTLL11Q8NHH1 800 aa25.28■■□□□ 1.64
PRKCSH-216ENST00000592445 GREM2Q9H772 168 aa25.28■■□□□ 1.64
PRKCSH-216ENST00000592445 CCDC30Q5VVM6 783 aa25.27■■□□□ 1.64
PRKCSH-216ENST00000592445 APOBEC3FQ8IUX4 373 aaKnown RBP25.27■■□□□ 1.64
PRKCSH-216ENST00000592445 CHMP4AQ9BY43 222 aa25.27■■□□□ 1.64
PRKCSH-216ENST00000592445 MMP14P50281 582 aa25.26■■□□□ 1.63
PRKCSH-216ENST00000592445 TTLL5Q6EMB2 1281 aa25.26■■□□□ 1.63
PRKCSH-216ENST00000592445 C8orf58Q8NAV2 365 aa25.26■■□□□ 1.63
PRKCSH-216ENST00000592445 KIAA0825Q8IV33 1275 aa25.25■■□□□ 1.63
PRKCSH-216ENST00000592445 CFHR5Q9BXR6 569 aa25.25■■□□□ 1.63
PRKCSH-216ENST00000592445 R3HDMLQ9H3Y0 253 aa25.25■■□□□ 1.63
PRKCSH-216ENST00000592445 ANGEL1Q9UNK9 670 aaKnown RBP25.25■■□□□ 1.63
PRKCSH-216ENST00000592445 LEMD3Q9Y2U8 911 aa25.25■■□□□ 1.63
PRKCSH-216ENST00000592445 ALDH1A1P00352 501 aa25.24■■□□□ 1.63
PRKCSH-216ENST00000592445 IGHMBP2P38935 993 aaKnown RBP25.24■■□□□ 1.63
PRKCSH-216ENST00000592445 NEXNQ0ZGT2 675 aa25.24■■□□□ 1.63
PRKCSH-216ENST00000592445 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
PRKCSH-216ENST00000592445 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.24■■□□□ 1.63
PRKCSH-216ENST00000592445 PI4KAP2A4QPH2 592 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 APAF1O14727 1248 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 IGKV5-2P06315 115 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 SPRYD7Q5W111 196 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 KSR2Q6VAB6 950 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 TXNRD3Q86VQ6 643 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 PI4KAP1Q8N8J0 262 aa25.23■■□□□ 1.63
PRKCSH-216ENST00000592445 SPEF2Q9C093 1822 aa25.22■■□□□ 1.63
PRKCSH-216ENST00000592445 LDLRAD1Q5T700 205 aa25.22■■□□□ 1.63
PRKCSH-216ENST00000592445 ZNF804BA4D1E1 1349 aa25.21■■□□□ 1.63
PRKCSH-216ENST00000592445 ANKRD2Q9GZV1 360 aa25.21■■□□□ 1.63
PRKCSH-216ENST00000592445 MANSC4A6NHS7 340 aaPredicted RBP25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 GTF2IP78347 998 aa25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 CWF19L2Q2TBE0 894 aaKnown RBP25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 GCC1Q96CN9 775 aa25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 SLC10A4Q96EP9 437 aa25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 FZD1Q9UP38 647 aa25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 TRIM17Q9Y577 477 aa25.2■■□□□ 1.62
PRKCSH-216ENST00000592445 KLRK1P26718 216 aa25.19■■□□□ 1.62
PRKCSH-216ENST00000592445 KCNJ4P48050 445 aa25.19■■□□□ 1.62
PRKCSH-216ENST00000592445 INHBEP58166 350 aa25.19■■□□□ 1.62
PRKCSH-216ENST00000592445 UBE3BQ7Z3V4 1068 aa25.19■■□□□ 1.62
PRKCSH-216ENST00000592445 MPHOSPH8Q99549 860 aa25.19■■□□□ 1.62
PRKCSH-216ENST00000592445 DEFB129Q9H1M3 183 aa25.19■■□□□ 1.62
PRKCSH-216ENST00000592445 NEURL1BA8MQ27 555 aa25.18■■□□□ 1.62
PRKCSH-216ENST00000592445 DLGAP5Q15398 846 aa25.18■■□□□ 1.62
PRKCSH-216ENST00000592445 IFNL1Q8IU54 200 aa25.18■■□□□ 1.62
PRKCSH-216ENST00000592445 STK31Q9BXU1 1019 aa25.18■■□□□ 1.62
PRKCSH-216ENST00000592445 ZNF646O15015 1829 aaPredicted RBP25.18■■□□□ 1.62
PRKCSH-216ENST00000592445 TSPYL6Q8N831 410 aa25.17■■□□□ 1.62
PRKCSH-216ENST00000592445 ZBED3Q96IU2 234 aaPredicted RBP25.17■■□□□ 1.62
PRKCSH-216ENST00000592445 MYH3P11055 1940 aa25.17■■□□□ 1.62
PRKCSH-216ENST00000592445 COL1A1P02452 1464 aaPredicted RBP25.16■■□□□ 1.62
PRKCSH-216ENST00000592445 PPP1R12BO60237 982 aaPredicted RBP25.16■■□□□ 1.62
PRKCSH-216ENST00000592445 ITGA6P23229 1130 aa25.16■■□□□ 1.62
PRKCSH-216ENST00000592445 H7C1W4 665 aa25.15■■□□□ 1.62
PRKCSH-216ENST00000592445 ZBTB48P10074 688 aaPredicted RBP25.15■■□□□ 1.62
PRKCSH-216ENST00000592445 INTS3Q68E01 1043 aaKnown RBP25.15■■□□□ 1.62
PRKCSH-216ENST00000592445 OTOP1Q7RTM1 612 aa25.15■■□□□ 1.62
PRKCSH-216ENST00000592445 WNK4Q96J92 1243 aa25.14■■□□□ 1.62
PRKCSH-216ENST00000592445 CD209Q9NNX6 404 aa25.14■■□□□ 1.62
PRKCSH-216ENST00000592445 MAP3K11Q16584 847 aa25.13■■□□□ 1.61
PRKCSH-216ENST00000592445 CLMNQ96JQ2 1002 aa25.13■■□□□ 1.61
PRKCSH-216ENST00000592445 PPP2R3BQ9Y5P8 575 aa25.13■■□□□ 1.61
PRKCSH-216ENST00000592445 HTTP42858 3142 aa25.13■■□□□ 1.61
PRKCSH-216ENST00000592445 MYO1BO43795 1136 aa25.12■■□□□ 1.61
PRKCSH-216ENST00000592445 CHRNDQ07001 517 aa25.12■■□□□ 1.61
PRKCSH-216ENST00000592445 POTEFA5A3E0 1075 aa25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 F8W031 263 aaPredicted RBP25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 IGF2BP3O00425 579 aaKnown RBP eCLIP25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 GCKRQ14397 625 aa25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 SUPT20HL1Q3ZLR7 823 aa25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 OTUD7BQ6GQQ9 843 aa25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 TSR2Q969E8 191 aaKnown RBP25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 ERO1AQ96HE7 468 aa25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 PLA2G12BQ9BX93 195 aa25.11■■□□□ 1.61
PRKCSH-216ENST00000592445 MKI67P46013 3256 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms