RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 SMC4Q9NTJ3 1288 aa19.59■□□□□ 0.73
CXXC1-217ENST00000592078 AKAP11Q9UKA4 1901 aa19.59■□□□□ 0.73
CXXC1-217ENST00000592078 XDHP47989 1333 aa19.58■□□□□ 0.73
CXXC1-217ENST00000592078 EGFRP00533 1210 aa19.58■□□□□ 0.72
CXXC1-217ENST00000592078 PCCAP05165 728 aaPredicted RBP19.58■□□□□ 0.72
CXXC1-217ENST00000592078 USP17L8P0C7I0 530 aa19.58■□□□□ 0.72
CXXC1-217ENST00000592078 ATP2B4P23634 1241 aa19.58■□□□□ 0.72
CXXC1-217ENST00000592078 DDX58O95786 925 aaKnown RBP19.57■□□□□ 0.72
CXXC1-217ENST00000592078 NF2P35240 595 aa19.57■□□□□ 0.72
CXXC1-217ENST00000592078 SCARF1Q14162 830 aa19.57■□□□□ 0.72
CXXC1-217ENST00000592078 OGFOD1Q8N543 542 aa19.57■□□□□ 0.72
CXXC1-217ENST00000592078 SUPT16HQ9Y5B9 1047 aaKnown RBP19.57■□□□□ 0.72
CXXC1-217ENST00000592078 MYO3BQ8WXR4 1341 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 USP17L3A6NCW0 530 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 USP17L4A6NCW7 530 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 ANGEL2Q5VTE6 544 aaKnown RBP19.56■□□□□ 0.72
CXXC1-217ENST00000592078 USP17L1Q7RTZ2 530 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 CDC5LQ99459 802 aaKnown RBP19.56■□□□□ 0.72
CXXC1-217ENST00000592078 MYOZ2Q9NPC6 264 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 KCNQ5Q9NR82 932 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 TAF1P21675 1872 aa19.56■□□□□ 0.72
CXXC1-217ENST00000592078 IPO8O15397 1037 aaKnown RBP19.55■□□□□ 0.72
CXXC1-217ENST00000592078 RRP1P56182 461 aaKnown RBP19.55■□□□□ 0.72
CXXC1-217ENST00000592078 G2E3Q7L622 706 aa19.55■□□□□ 0.72
CXXC1-217ENST00000592078 GMLQ99445 158 aa19.55■□□□□ 0.72
CXXC1-217ENST00000592078 CWC25Q9NXE8 425 aaPredicted RBP19.55■□□□□ 0.72
CXXC1-217ENST00000592078 NOB1Q9ULX3 412 aaKnown RBP19.55■□□□□ 0.72
CXXC1-217ENST00000592078 POLR2AP24928 1970 aaKnown RBP19.55■□□□□ 0.72
CXXC1-217ENST00000592078 PTPRCP08575 1304 aa19.54■□□□□ 0.72
CXXC1-217ENST00000592078 RASAL3Q86YV0 1011 aa19.54■□□□□ 0.72
CXXC1-217ENST00000592078 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.54■□□□□ 0.72
CXXC1-217ENST00000592078 HDAC9Q9UKV0 1011 aa19.54■□□□□ 0.72
CXXC1-217ENST00000592078 PAPPA2Q9BXP8 1791 aa19.54■□□□□ 0.72
CXXC1-217ENST00000592078 FLIIQ13045 1269 aa19.53■□□□□ 0.72
CXXC1-217ENST00000592078 RTL5Q5HYW3 569 aaPredicted RBP19.53■□□□□ 0.72
CXXC1-217ENST00000592078 PRPF38BQ5VTL8 546 aaKnown RBP19.53■□□□□ 0.72
CXXC1-217ENST00000592078 TM4SF4P48230 202 aa19.52■□□□□ 0.72
CXXC1-217ENST00000592078 SREBF2Q12772 1141 aa19.52■□□□□ 0.72
CXXC1-217ENST00000592078 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
CXXC1-217ENST00000592078 ZKSCAN2Q63HK3 967 aa19.52■□□□□ 0.72
CXXC1-217ENST00000592078 DLK2Q6UY11 383 aa19.52■□□□□ 0.72
CXXC1-217ENST00000592078 PHAXQ9H814 394 aaKnown RBP19.52■□□□□ 0.72
CXXC1-217ENST00000592078 SEC31BQ9NQW1 1179 aa19.52■□□□□ 0.72
CXXC1-217ENST00000592078 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
CXXC1-217ENST00000592078 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
CXXC1-217ENST00000592078 CFHR5Q9BXR6 569 aa19.51■□□□□ 0.71
CXXC1-217ENST00000592078 API5Q9BZZ5 524 aaKnown RBP19.51■□□□□ 0.71
CXXC1-217ENST00000592078 BSDC1Q9NW68 430 aaPredicted RBP19.51■□□□□ 0.71
CXXC1-217ENST00000592078 MED23Q9ULK4 1368 aa19.51■□□□□ 0.71
CXXC1-217ENST00000592078 CACNA1FO60840 1977 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 ALDH1A1P00352 501 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 TRIM27P14373 513 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 INHBEP58166 350 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 STRIP1Q5VSL9 837 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 MYD88Q99836 296 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 COA1Q9GZY4 146 aa19.5■□□□□ 0.71
CXXC1-217ENST00000592078 PLIN1O60240 522 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 MS4A1P11836 297 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 ARMC9Q7Z3E5 817 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 HPS5Q9UPZ3 1129 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 LEMD3Q9Y2U8 911 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 PDE4DIPQ5VU43 2346 aa19.49■□□□□ 0.71
CXXC1-217ENST00000592078 PSME4Q14997 1843 aa19.48■□□□□ 0.71
CXXC1-217ENST00000592078 UNCXA6NJT0 531 aa19.48■□□□□ 0.71
CXXC1-217ENST00000592078 SOX10P56693 466 aa19.48■□□□□ 0.71
CXXC1-217ENST00000592078 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
CXXC1-217ENST00000592078 GCC1Q96CN9 775 aa19.48■□□□□ 0.71
CXXC1-217ENST00000592078 SCN9AQ15858 1988 aa19.47■□□□□ 0.71
CXXC1-217ENST00000592078 FBXO46Q6PJ61 603 aaPredicted RBP19.47■□□□□ 0.71
CXXC1-217ENST00000592078 KSR2Q6VAB6 950 aa19.47■□□□□ 0.71
CXXC1-217ENST00000592078 APOBEC3FQ8IUX4 373 aaKnown RBP19.47■□□□□ 0.71
CXXC1-217ENST00000592078 CTSWP56202 376 aa19.46■□□□□ 0.71
CXXC1-217ENST00000592078 TTLL12Q14166 644 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-217ENST00000592078 ZNF296Q8WUU4 475 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-217ENST00000592078 ANKRD2Q9GZV1 360 aa19.46■□□□□ 0.71
CXXC1-217ENST00000592078 ASTN2O75129 1339 aaPredicted RBP19.46■□□□□ 0.71
CXXC1-217ENST00000592078 GPR25O00155 361 aa19.45■□□□□ 0.7
CXXC1-217ENST00000592078 WNT10BO00744 389 aa19.45■□□□□ 0.7
CXXC1-217ENST00000592078 CCT4P50991 539 aaKnown RBP19.45■□□□□ 0.7
CXXC1-217ENST00000592078 FKBP5Q13451 457 aaPredicted RBP19.45■□□□□ 0.7
CXXC1-217ENST00000592078 DZIP1LQ8IYY4 767 aaKnown RBP19.45■□□□□ 0.7
CXXC1-217ENST00000592078 MINPP1Q9UNW1 487 aa19.45■□□□□ 0.7
CXXC1-217ENST00000592078 PI4KAP2A4QPH2 592 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 UBE2Q2LH0YL09 131 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 FKTNO75072 461 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 RLBP1P12271 317 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 DACT2Q5SW24 774 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 INTS3Q68E01 1043 aaKnown RBP19.44■□□□□ 0.7
CXXC1-217ENST00000592078 PI4KAP1Q8N8J0 262 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 TTLL11Q8NHH1 800 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 TNNQ9UQP3 1299 aa19.44■□□□□ 0.7
CXXC1-217ENST00000592078 COL1A1P02452 1464 aaPredicted RBP19.43■□□□□ 0.7
CXXC1-217ENST00000592078 IGHMBP2P38935 993 aaKnown RBP19.43■□□□□ 0.7
CXXC1-217ENST00000592078 C20orf194Q5TEA3 1177 aa19.43■□□□□ 0.7
CXXC1-217ENST00000592078 DNAAF4Q8WXU2 420 aa19.43■□□□□ 0.7
CXXC1-217ENST00000592078 TBC1D8O95759 1140 aa19.42■□□□□ 0.7
CXXC1-217ENST00000592078 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms