RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 Q6ZUG5 572 aa18.72■□□□□ 0.59
MBD1-227ENST00000592060 RBSNQ9H1K0 784 aa18.72■□□□□ 0.59
MBD1-227ENST00000592060 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
MBD1-227ENST00000592060 HMGB1P09429 215 aaKnown RBP18.72■□□□□ 0.59
MBD1-227ENST00000592060 ZAP70P43403 619 aa18.72■□□□□ 0.59
MBD1-227ENST00000592060 LRRFIP1Q32MZ4 808 aaKnown RBP18.72■□□□□ 0.59
MBD1-227ENST00000592060 BARGINQ6ZT62 677 aa18.72■□□□□ 0.59
MBD1-227ENST00000592060 MYO5AQ9Y4I1 1855 aaKnown RBP18.71■□□□□ 0.59
MBD1-227ENST00000592060 VPS37CA5D8V6 355 aaPredicted RBP18.71■□□□□ 0.59
MBD1-227ENST00000592060 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
MBD1-227ENST00000592060 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
MBD1-227ENST00000592060 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
MBD1-227ENST00000592060 AK7Q96M32 723 aa18.71■□□□□ 0.59
MBD1-227ENST00000592060 A0A0G2JLW4 131 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 FOXP2O15409 715 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 PDCP20941 246 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 ITPK1Q13572 414 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 LARP1BQ659C4 914 aaKnown RBP18.7■□□□□ 0.58
MBD1-227ENST00000592060 SYAP1Q96A49 352 aaPredicted RBP18.7■□□□□ 0.58
MBD1-227ENST00000592060 PPP1R9BQ96SB3 815 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 SIK1P57059 783 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 EXOSC10Q01780 885 aaKnown RBP18.7■□□□□ 0.58
MBD1-227ENST00000592060 STK3Q13188 491 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 CDC37L1Q7L3B6 337 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 DHX32Q7L7V1 743 aaKnown RBP18.7■□□□□ 0.58
MBD1-227ENST00000592060 AGXT2Q9BYV1 514 aa18.7■□□□□ 0.58
MBD1-227ENST00000592060 RRAGDQ9NQL2 400 aaPredicted RBP18.7■□□□□ 0.58
MBD1-227ENST00000592060 E7EWF7 191 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 CAMTA2O94983 1202 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 ATP6V1AP38606 617 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 MCAMP43121 646 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 UBE2HP62256 183 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
MBD1-227ENST00000592060 CCDC173Q0VFZ6 552 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 PI16Q6UXB8 463 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 APPBP2Q92624 585 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 ATRNO75882 1429 aa18.69■□□□□ 0.58
MBD1-227ENST00000592060 FIBPO43427 364 aa18.68■□□□□ 0.58
MBD1-227ENST00000592060 PDE8BO95263 885 aa18.68■□□□□ 0.58
MBD1-227ENST00000592060 SUSD4Q5VX71 490 aa18.68■□□□□ 0.58
MBD1-227ENST00000592060 DOCK2Q92608 1830 aa18.68■□□□□ 0.58
MBD1-227ENST00000592060 BRF1Q92994 677 aa18.68■□□□□ 0.58
MBD1-227ENST00000592060 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
MBD1-227ENST00000592060 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
MBD1-227ENST00000592060 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
MBD1-227ENST00000592060 PFKFB2O60825 505 aa18.67■□□□□ 0.58
MBD1-227ENST00000592060 HSPA1LP34931 641 aa18.67■□□□□ 0.58
MBD1-227ENST00000592060 CSPP1Q1MSJ5 1256 aa18.67■□□□□ 0.58
MBD1-227ENST00000592060 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
MBD1-227ENST00000592060 MYH15Q9Y2K3 1946 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 JAK2O60674 1132 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 FGFR2P21802 821 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 TTLL5Q6EMB2 1281 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 HSP90B1P14625 803 aaKnown RBP18.66■□□□□ 0.58
MBD1-227ENST00000592060 ARID4AP29374 1257 aaPredicted RBP18.66■□□□□ 0.58
MBD1-227ENST00000592060 SCRN1Q12765 414 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 WASHC4Q2M389 1173 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 SMARCC2Q8TAQ2 1214 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 CASZ1Q86V15 1759 aa18.66■□□□□ 0.58
MBD1-227ENST00000592060 MROH5Q6ZUA9 1318 aa18.65■□□□□ 0.58
MBD1-227ENST00000592060 A0A0G2JS52 829 aa18.65■□□□□ 0.58
MBD1-227ENST00000592060 PHF14O94880 888 aa18.65■□□□□ 0.58
MBD1-227ENST00000592060 PIP4K2BP78356 416 aa18.65■□□□□ 0.58
MBD1-227ENST00000592060 CCDC183Q5T5S1 534 aa18.65■□□□□ 0.58
MBD1-227ENST00000592060 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
MBD1-227ENST00000592060 PUS7LQ9H0K6 701 aaKnown RBP18.65■□□□□ 0.58
MBD1-227ENST00000592060 RTL9Q8NET4 1388 aa18.65■□□□□ 0.58
MBD1-227ENST00000592060 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.58
MBD1-227ENST00000592060 PARP10Q53GL7 1025 aa18.64■□□□□ 0.58
MBD1-227ENST00000592060 LLPHQ9BRT6 129 aaKnown RBP18.64■□□□□ 0.58
MBD1-227ENST00000592060 CTNNA3Q9UI47 895 aa18.64■□□□□ 0.58
MBD1-227ENST00000592060 A0A1B0GUL6 1792 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 NTSR2O95665 410 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 ADD2P35612 726 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 PHKA1P46020 1223 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 PUM3Q15397 648 aaKnown RBP18.64■□□□□ 0.57
MBD1-227ENST00000592060 CCDC102BQ68D86 513 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 FBXL16Q8N461 479 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.64■□□□□ 0.576e-7■■■■□ 21.9
MBD1-227ENST00000592060 TSPY26PQ9H489 355 aa18.64■□□□□ 0.57
MBD1-227ENST00000592060 PIH1D3Q9NQM4 214 aaKnown RBP18.64■□□□□ 0.57
MBD1-227ENST00000592060 APOBRQ0VD83 1088 aa18.63■□□□□ 0.57
MBD1-227ENST00000592060 FERMT3Q86UX7 667 aa18.63■□□□□ 0.57
MBD1-227ENST00000592060 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
MBD1-227ENST00000592060 GPAA1O43292 621 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 UQCRFS1P1P0C7P4 283 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 KRT85P78386 507 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 TTF1Q15361 905 aaPredicted RBP18.62■□□□□ 0.57
MBD1-227ENST00000592060 ZSCAN25Q6NSZ9 544 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 NSUN7Q8NE18 718 aaKnown RBP18.62■□□□□ 0.57
MBD1-227ENST00000592060 LPIN2Q92539 896 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 SCN7AQ01118 1682 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 ELP1O95163 1332 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 COL4A1P02462 1669 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 FGAP02671 866 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 FGD1P98174 961 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 TTC6Q86TZ1 520 aa18.62■□□□□ 0.57
MBD1-227ENST00000592060 ANP32BQ92688 251 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms