RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ADAMTSL1Q8N6G6 1762 aa12.22□□□□□ -0.45
BRCA1-226ENST00000591534 RAD17O75943 681 aa12.21□□□□□ -0.45
BRCA1-226ENST00000591534 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
BRCA1-226ENST00000591534 HSPA8P11142 646 aaKnown RBP12.21□□□□□ -0.45
BRCA1-226ENST00000591534 WASHC4Q2M389 1173 aa12.21□□□□□ -0.45
BRCA1-226ENST00000591534 CST9Q5W186 159 aa12.21□□□□□ -0.45
BRCA1-226ENST00000591534 PLSCR2Q9NRY7 297 aa12.21□□□□□ -0.45
BRCA1-226ENST00000591534 CHPF2Q9P2E5 772 aa12.21□□□□□ -0.45
BRCA1-226ENST00000591534 PGAP2Q9UHJ9 254 aa12.21□□□□□ -0.45
BRCA1-226ENST00000591534 TRAF5O00463 557 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 TBC1D12O60347 775 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 EVI5O60447 810 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
BRCA1-226ENST00000591534 CYP4F22Q6NT55 531 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 POTEGQ6S5H5 508 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 SAPCD2Q86UD0 394 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 CCDC146Q8IYE0 955 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 DPF2Q92785 391 aa12.2□□□□□ -0.46
BRCA1-226ENST00000591534 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
BRCA1-226ENST00000591534 NSFL1CQ9UNZ2 370 aaKnown RBP12.2□□□□□ -0.46
BRCA1-226ENST00000591534 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
BRCA1-226ENST00000591534 OSBPP22059 807 aa12.19□□□□□ -0.46
BRCA1-226ENST00000591534 RPS12P25398 132 aaKnown RBP12.19□□□□□ -0.46
BRCA1-226ENST00000591534 TRIM28Q13263 835 aaKnown RBP12.19□□□□□ -0.46
BRCA1-226ENST00000591534 COL4A5P29400 1685 aa12.19□□□□□ -0.46
BRCA1-226ENST00000591534 TMEM132AQ24JP5 1023 aa12.18□□□□□ -0.46
BRCA1-226ENST00000591534 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-226ENST00000591534 RIC3Q7Z5B4 369 aa12.18□□□□□ -0.46
BRCA1-226ENST00000591534 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
BRCA1-226ENST00000591534 ABHD8Q96I13 439 aa12.18□□□□□ -0.46
BRCA1-226ENST00000591534 ISCA1Q9BUE6 129 aa12.18□□□□□ -0.46
BRCA1-226ENST00000591534 GLIS2Q9BZE0 524 aaPredicted RBP12.18□□□□□ -0.46
BRCA1-226ENST00000591534 ZC3H12CQ9C0D7 883 aaKnown RBP12.18□□□□□ -0.46
BRCA1-226ENST00000591534 ZNF408Q9H9D4 720 aa12.18□□□□□ -0.46
BRCA1-226ENST00000591534 IRS4O14654 1257 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-226ENST00000591534 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
BRCA1-226ENST00000591534 NOGQ13253 232 aa12.17□□□□□ -0.46
BRCA1-226ENST00000591534 DUSP27Q5VZP5 1158 aa12.17□□□□□ -0.46
BRCA1-226ENST00000591534 DIEXFQ68CQ4 756 aaKnown RBP12.17□□□□□ -0.46
BRCA1-226ENST00000591534 DCPSQ96C86 337 aaKnown RBP12.17□□□□□ -0.46
BRCA1-226ENST00000591534 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-226ENST00000591534 ATP5J2-PTCD1G3V325 749 aa12.16□□□□□ -0.46
BRCA1-226ENST00000591534 GPR37O15354 613 aa12.16□□□□□ -0.46
BRCA1-226ENST00000591534 DDX58O95786 925 aaKnown RBP12.16□□□□□ -0.46
BRCA1-226ENST00000591534 GNAI1P63096 354 aa12.16□□□□□ -0.46
BRCA1-226ENST00000591534 FMR1Q06787 632 aaKnown RBP eCLIP12.16□□□□□ -0.46
BRCA1-226ENST00000591534 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
BRCA1-226ENST00000591534 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-226ENST00000591534 PTCD2Q8WV60 388 aaKnown RBP12.16□□□□□ -0.46
BRCA1-226ENST00000591534 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
BRCA1-226ENST00000591534 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
BRCA1-226ENST00000591534 YDJCA8MPS7 323 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 PSMD14O00487 310 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 HIRAP54198 1017 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-226ENST00000591534 CCDC152Q4G0S7 254 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 KRT26Q7Z3Y9 468 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 C2orf69Q8N8R5 385 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
BRCA1-226ENST00000591534 FAM163AQ96GL9 167 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-226ENST00000591534 DBNDD1Q9H9R9 158 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 IFT57Q9NWB7 429 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
BRCA1-226ENST00000591534 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 ECE2O60344 883 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 AOC2O75106 756 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 HUNKP57058 714 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 GPSM2P81274 684 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 CCDC184Q52MB2 194 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 RTL5Q5HYW3 569 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-226ENST00000591534 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 CCDC191Q8NCU4 936 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 TBC1D16Q8TBP0 767 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 TRPM4Q8TD43 1214 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 POLLQ9UGP5 575 aa12.14□□□□□ -0.47
BRCA1-226ENST00000591534 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
BRCA1-226ENST00000591534 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-226ENST00000591534 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
BRCA1-226ENST00000591534 CWC25Q9NXE8 425 aaPredicted RBP12.13□□□□□ -0.47
BRCA1-226ENST00000591534 GGA1Q9UJY5 639 aa12.13□□□□□ -0.47
BRCA1-226ENST00000591534 PDE8AO60658 829 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 UFL1O94874 794 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 PCCAP05165 728 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-226ENST00000591534 VIL1P09327 827 aaKnown RBP12.12□□□□□ -0.47
BRCA1-226ENST00000591534 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 RGMBQ6NW40 437 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 SAMD7Q7Z3H4 446 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 MYD88Q99836 296 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
BRCA1-226ENST00000591534 ANKRD36CQ5JPF3 1778 aa12.12□□□□□ -0.47
BRCA1-226ENST00000591534 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
BRCA1-226ENST00000591534 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
BRCA1-226ENST00000591534 KIF4BQ2VIQ3 1234 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms