RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
VMP1-211ENST00000591315 EAPPQ56P03 285 aaPredicted RBP14.41□□□□□ -0.1
VMP1-211ENST00000591315 ATG9AQ7Z3C6 839 aa14.41□□□□□ -0.1
VMP1-211ENST00000591315 VGLL2Q8N8G2 317 aa14.41□□□□□ -0.1
VMP1-211ENST00000591315 RBM46Q8TBY0 533 aaKnown RBP14.41□□□□□ -0.1
VMP1-211ENST00000591315 GPRC5DQ9NZD1 345 aa14.41□□□□□ -0.1
VMP1-211ENST00000591315 PNMA6EA0A0J9YXQ4 647 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 EYA2O00167 538 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 GNAI2P04899 355 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 KCNA4P22459 653 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 TNIP1Q15025 636 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 METTL24Q5JXM2 366 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 COG6Q9Y2V7 657 aa14.4□□□□□ -0.1
VMP1-211ENST00000591315 ZNF646O15015 1829 aaPredicted RBP14.39□□□□□ -0.11
VMP1-211ENST00000591315 IQCA1LA6NCM1 817 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 SRGAP3O43295 1099 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 EGFRP00533 1210 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 VIL1P09327 827 aaKnown RBP14.39□□□□□ -0.11
VMP1-211ENST00000591315 GYG1P46976 350 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 TRPM4Q8TD43 1214 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 CD209Q9NNX6 404 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 CNOT7Q9UIV1 285 aaKnown RBP14.39□□□□□ -0.11
VMP1-211ENST00000591315 JAG2Q9Y219 1238 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.39□□□□□ -0.11
VMP1-211ENST00000591315 MROH5Q6ZUA9 1318 aa14.39□□□□□ -0.11
VMP1-211ENST00000591315 PSME4Q14997 1843 aa14.38□□□□□ -0.11
VMP1-211ENST00000591315 LMOD1P29536 600 aaPredicted RBP14.38□□□□□ -0.11
VMP1-211ENST00000591315 HIRAP54198 1017 aaPredicted RBP14.38□□□□□ -0.11
VMP1-211ENST00000591315 SAMD7Q7Z3H4 446 aa14.38□□□□□ -0.11
VMP1-211ENST00000591315 PODNQ7Z5L7 613 aa14.38□□□□□ -0.11
VMP1-211ENST00000591315 MICALL2Q8IY33 904 aa14.38□□□□□ -0.11
VMP1-211ENST00000591315 COA1Q9GZY4 146 aa14.38□□□□□ -0.11
VMP1-211ENST00000591315 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
VMP1-211ENST00000591315 ADAMTSL1Q8N6G6 1762 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 USP17L3A6NCW0 530 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 USP17L4A6NCW7 530 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 PDE8BO95263 885 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 HOXD11P31277 338 aaPredicted RBP14.37□□□□□ -0.11
VMP1-211ENST00000591315 HTRA3P83110 453 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 MTX1Q13505 466 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 UBE4AQ14139 1066 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 DACT2Q5SW24 774 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 MAP1SQ66K74 1059 aaPredicted RBP14.37□□□□□ -0.11
VMP1-211ENST00000591315 RSBN1LQ6PCB5 846 aaPredicted RBP14.37□□□□□ -0.11
VMP1-211ENST00000591315 C15orf52Q6ZUT6 534 aaKnown RBP14.37□□□□□ -0.11
VMP1-211ENST00000591315 USP17L1Q7RTZ2 530 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 SMC1BQ8NDV3 1235 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 FAM84BQ96KN1 310 aaPredicted RBP14.37□□□□□ -0.11
VMP1-211ENST00000591315 GMLQ99445 158 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
VMP1-211ENST00000591315 FGFR2P21802 821 aa14.36□□□□□ -0.11
VMP1-211ENST00000591315 GTF2IP78347 998 aa14.36□□□□□ -0.11
VMP1-211ENST00000591315 FMR1Q06787 632 aaKnown RBP eCLIP14.36□□□□□ -0.11
VMP1-211ENST00000591315 TBC1D10BQ4KMP7 808 aaPredicted RBP14.36□□□□□ -0.11
VMP1-211ENST00000591315 RBM26Q5T8P6 1007 aaKnown RBP14.36□□□□□ -0.11
VMP1-211ENST00000591315 CHADLQ6NUI6 762 aa14.36□□□□□ -0.11
VMP1-211ENST00000591315 LDHDQ86WU2 507 aa14.36□□□□□ -0.11
VMP1-211ENST00000591315 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
VMP1-211ENST00000591315 IQSEC3Q9UPP2 1182 aaPredicted RBP14.36□□□□□ -0.11
VMP1-211ENST00000591315 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
VMP1-211ENST00000591315 POLR2AP24928 1970 aaKnown RBP14.36□□□□□ -0.11
VMP1-211ENST00000591315 FSTL1Q12841 308 aa14.35□□□□□ -0.11
VMP1-211ENST00000591315 MVPQ14764 893 aaKnown RBP14.35□□□□□ -0.11
VMP1-211ENST00000591315 TTLL5Q6EMB2 1281 aa14.35□□□□□ -0.11
VMP1-211ENST00000591315 DLK2Q6UY11 383 aa14.35□□□□□ -0.11
VMP1-211ENST00000591315 CERS5Q8N5B7 392 aa14.35□□□□□ -0.11
VMP1-211ENST00000591315 DPF2Q92785 391 aa14.35□□□□□ -0.11
VMP1-211ENST00000591315 ADARB2Q9NS39 739 aaKnown RBP14.35□□□□□ -0.11
VMP1-211ENST00000591315 ASTN2O75129 1339 aaPredicted RBP14.35□□□□□ -0.11
VMP1-211ENST00000591315 CIAO1O76071 339 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 IL1R1P14778 569 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 HSPA6P17066 643 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 HIBADHP31937 336 aaKnown RBP14.34□□□□□ -0.11
VMP1-211ENST00000591315 BCAMP50895 628 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 ATP8B2P98198 1209 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 POLA2Q14181 598 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 ZNF804AQ7Z570 1209 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 FBXO33Q7Z6M2 555 aa14.34□□□□□ -0.11
VMP1-211ENST00000591315 H7C1D1 291 aa14.33□□□□□ -0.12
VMP1-211ENST00000591315 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 ITGBL1O95965 494 aaPredicted RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 RPS12P25398 132 aaKnown RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 ADORA1P30542 326 aa14.33□□□□□ -0.12
VMP1-211ENST00000591315 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 TFCP2Q12800 502 aa14.33□□□□□ -0.12
VMP1-211ENST00000591315 PUM3Q15397 648 aaKnown RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 STRIP1Q5VSL9 837 aa14.33□□□□□ -0.12
VMP1-211ENST00000591315 CEP85Q6P2H3 762 aa14.33□□□□□ -0.12
VMP1-211ENST00000591315 USP50Q70EL3 339 aaPredicted RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 PNMA8AQ86V59 439 aaPredicted RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 TDRD7Q8NHU6 1098 aaKnown RBP14.33□□□□□ -0.12
VMP1-211ENST00000591315 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
VMP1-211ENST00000591315 TRAF5O00463 557 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 MS4A1P11836 297 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
VMP1-211ENST00000591315 TIMM10P62072 90 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 GRIK5Q16478 980 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 ATP2B3Q16720 1220 aa14.32□□□□□ -0.12
VMP1-211ENST00000591315 CNTROBQ8N137 903 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms