RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 EYA3Q99504 573 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 FPGT-TNNI3KV9GXZ4 949 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 COL4A5P29400 1685 aa14.87□□□□□ -0.03
APOC1-206ENST00000590334 A0A1B0GUL7 405 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 SLC5A1P13866 664 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 KCNJ4P48050 445 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 KIAA2012Q0VF49 1180 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 AKAP11Q9UKA4 1901 aa14.86□□□□□ -0.03
APOC1-206ENST00000590334 APBB1O00213 710 aa14.85□□□□□ -0.03
APOC1-206ENST00000590334 ZBTB22O15209 634 aa14.85□□□□□ -0.03
APOC1-206ENST00000590334 IFIT1P09914 478 aaKnown RBP14.85□□□□□ -0.03
APOC1-206ENST00000590334 IARSP41252 1262 aaKnown RBP14.85□□□□□ -0.03
APOC1-206ENST00000590334 PRELPP51888 382 aa14.85□□□□□ -0.03
APOC1-206ENST00000590334 TIMM10P62072 90 aa14.85□□□□□ -0.03
APOC1-206ENST00000590334 RASSF7Q02833 373 aa14.85□□□□□ -0.03
APOC1-206ENST00000590334 CENPQQ7L2Z9 268 aaPredicted RBP14.85□□□□□ -0.03
APOC1-206ENST00000590334 CLASRPQ8N2M8 674 aaKnown RBP14.85□□□□□ -0.03
APOC1-206ENST00000590334 EAF2Q96CJ1 260 aaPredicted RBP14.85□□□□□ -0.03
APOC1-206ENST00000590334 ZC3H12CQ9C0D7 883 aaKnown RBP14.85□□□□□ -0.03
APOC1-206ENST00000590334 SCN9AQ15858 1988 aa14.85□□□□□ -0.03
APOC1-206ENST00000590334 LMNB1P20700 586 aa14.84□□□□□ -0.03
APOC1-206ENST00000590334 KLRK1P26718 216 aa14.84□□□□□ -0.03
APOC1-206ENST00000590334 NUCB1Q02818 461 aa14.84□□□□□ -0.03
APOC1-206ENST00000590334 TXNRD3Q86VQ6 643 aa14.84□□□□□ -0.03
APOC1-206ENST00000590334 GPR101Q96P66 508 aaPredicted RBP14.84□□□□□ -0.03
APOC1-206ENST00000590334 IL1RAPL2Q9NP60 686 aa14.84□□□□□ -0.03
APOC1-206ENST00000590334 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
APOC1-206ENST00000590334 PPIP5K2O43314 1243 aa14.83□□□□□ -0.04
APOC1-206ENST00000590334 SMARCA5O60264 1052 aaPredicted RBP14.83□□□□□ -0.04
APOC1-206ENST00000590334 AOC3Q16853 763 aa14.83□□□□□ -0.04
APOC1-206ENST00000590334 ANKRD45Q5TZF3 282 aa14.83□□□□□ -0.04
APOC1-206ENST00000590334 FBXO33Q7Z6M2 555 aa14.83□□□□□ -0.04
APOC1-206ENST00000590334 XAGE2Q96GT9 111 aa14.83□□□□□ -0.04
APOC1-206ENST00000590334 FAM84BQ96KN1 310 aaPredicted RBP14.83□□□□□ -0.04
APOC1-206ENST00000590334 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 RIMBP2O15034 1052 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 ADORA1P30542 326 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 CAVIN4Q5BKX8 364 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 B4GALNT3Q6L9W6 998 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 AACSQ86V21 672 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 NEUROD6Q96NK8 337 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 COA1Q9GZY4 146 aa14.82□□□□□ -0.04
APOC1-206ENST00000590334 DBNLQ9UJU6 430 aaKnown RBP14.82□□□□□ -0.04
APOC1-206ENST00000590334 IL1R1P14778 569 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 HIBADHP31937 336 aaKnown RBP14.81□□□□□ -0.04
APOC1-206ENST00000590334 GYG1P46976 350 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 ZNF804AQ7Z570 1209 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 CHD1LQ86WJ1 897 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 LARGE2Q8N3Y3 721 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 DBNDD2Q9BQY9 259 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 CCDC8Q9H0W5 538 aaPredicted RBP14.81□□□□□ -0.04
APOC1-206ENST00000590334 SALL3Q9BXA9 1300 aa14.81□□□□□ -0.04
APOC1-206ENST00000590334 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
APOC1-206ENST00000590334 BCAMP50895 628 aa14.8□□□□□ -0.04
APOC1-206ENST00000590334 CCDC102BQ68D86 513 aa14.8□□□□□ -0.04
APOC1-206ENST00000590334 PODNQ7Z5L7 613 aa14.8□□□□□ -0.04
APOC1-206ENST00000590334 ZNF512BQ96KM6 892 aaPredicted RBP14.8□□□□□ -0.04
APOC1-206ENST00000590334 CD209Q9NNX6 404 aa14.8□□□□□ -0.04
APOC1-206ENST00000590334 TLR7Q9NYK1 1049 aaKnown RBP14.8□□□□□ -0.04
APOC1-206ENST00000590334 ZBTB47Q9UFB7 747 aaPredicted RBP14.8□□□□□ -0.04
APOC1-206ENST00000590334 DOCK2Q92608 1830 aa14.8□□□□□ -0.04
APOC1-206ENST00000590334 ECE2O60344 883 aa14.79□□□□□ -0.04
APOC1-206ENST00000590334 ARID4AP29374 1257 aaPredicted RBP14.79□□□□□ -0.04
APOC1-206ENST00000590334 PHKA1P46020 1223 aa14.79□□□□□ -0.04
APOC1-206ENST00000590334 NIM1KQ8IY84 436 aa14.79□□□□□ -0.04
APOC1-206ENST00000590334 TDRD7Q8NHU6 1098 aaKnown RBP14.79□□□□□ -0.04
APOC1-206ENST00000590334 LNPKQ9C0E8 428 aa14.79□□□□□ -0.04
APOC1-206ENST00000590334 ZNRF3Q9ULT6 936 aa14.79□□□□□ -0.04
APOC1-206ENST00000590334 ZC3H4Q9UPT8 1303 aaKnown RBP14.79□□□□□ -0.04
APOC1-206ENST00000590334 MYO5AQ9Y4I1 1855 aaKnown RBP14.79□□□□□ -0.04
APOC1-206ENST00000590334 PDS5AQ29RF7 1337 aaKnown RBP14.78□□□□□ -0.04
APOC1-206ENST00000590334 YDJCA8MPS7 323 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 FZD9O00144 591 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 SEMA3EO15041 775 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 DOK7Q18PE1 504 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 GORABQ5T7V8 394 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 VPS37DQ86XT2 251 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 C16orf71Q8IYS4 520 aaPredicted RBP14.78□□□□□ -0.04
APOC1-206ENST00000590334 JDP2Q8WYK2 163 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 DBNDD1Q9H9R9 158 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 RNF181Q9P0P0 153 aa14.78□□□□□ -0.04
APOC1-206ENST00000590334 COL1A1P02452 1464 aaPredicted RBP14.77□□□□□ -0.04
APOC1-206ENST00000590334 TTC41PQ6P2S7 1318 aa14.77□□□□□ -0.04
APOC1-206ENST00000590334 MYH7P12883 1935 aa14.77□□□□□ -0.04
APOC1-206ENST00000590334 AK9Q5TCS8 1911 aa14.77□□□□□ -0.04
APOC1-206ENST00000590334 G3V3G9 751 aa14.77□□□□□ -0.05
APOC1-206ENST00000590334 UQCRFS1P1P0C7P4 283 aa14.77□□□□□ -0.05
APOC1-206ENST00000590334 CCDC158Q5M9N0 1113 aa14.77□□□□□ -0.05
APOC1-206ENST00000590334 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
APOC1-206ENST00000590334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.77□□□□□ -0.05
APOC1-206ENST00000590334 GNL3LQ9NVN8 582 aaKnown RBP14.77□□□□□ -0.05
APOC1-206ENST00000590334 STAP2Q9UGK3 403 aa14.77□□□□□ -0.05
APOC1-206ENST00000590334 MAST2Q6P0Q8 1798 aa14.76□□□□□ -0.05
APOC1-206ENST00000590334 FAM205AQ6ZU69 1335 aa14.76□□□□□ -0.05
APOC1-206ENST00000590334 ATP5JP18859 108 aa14.76□□□□□ -0.05
APOC1-206ENST00000590334 ECHDC1Q9NTX5 307 aa14.76□□□□□ -0.05
APOC1-206ENST00000590334 GTF3C3Q9Y5Q9 886 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms