RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C15orf52Q6ZUT6 534 aaKnown RBP22.9■■□□□ 1.26
DDX39A-212ENST00000590260 USP50Q70EL3 339 aaPredicted RBP22.9■■□□□ 1.26
DDX39A-212ENST00000590260 PODNQ7Z5L7 613 aa22.9■■□□□ 1.26
DDX39A-212ENST00000590260 MICALL2Q8IY33 904 aa22.9■■□□□ 1.26
DDX39A-212ENST00000590260 DNAJC5GQ8N7S2 189 aa22.9■■□□□ 1.26
DDX39A-212ENST00000590260 DPF2Q92785 391 aa22.9■■□□□ 1.26
DDX39A-212ENST00000590260 CNNM1Q9NRU3 951 aa22.9■■□□□ 1.26
DDX39A-212ENST00000590260 PLIN1O60240 522 aa22.89■■□□□ 1.25
DDX39A-212ENST00000590260 TAF7LQ5H9L4 462 aa22.89■■□□□ 1.25
DDX39A-212ENST00000590260 MXD3Q9BW11 206 aa22.89■■□□□ 1.25
DDX39A-212ENST00000590260 CLEC11AQ9Y240 323 aa22.89■■□□□ 1.25
DDX39A-212ENST00000590260 IPO8O15397 1037 aaKnown RBP22.88■■□□□ 1.25
DDX39A-212ENST00000590260 RLBP1P12271 317 aa22.88■■□□□ 1.25
DDX39A-212ENST00000590260 PTPN12Q05209 780 aaKnown RBP22.88■■□□□ 1.25
DDX39A-212ENST00000590260 FMR1Q06787 632 aaKnown RBP eCLIP22.88■■□□□ 1.25
DDX39A-212ENST00000590260 ZKSCAN2Q63HK3 967 aa22.88■■□□□ 1.25
DDX39A-212ENST00000590260 TMEM57Q8N5G2 664 aa22.88■■□□□ 1.25
DDX39A-212ENST00000590260 VGLL2Q8N8G2 317 aa22.88■■□□□ 1.25
DDX39A-212ENST00000590260 COA1Q9GZY4 146 aa22.88■■□□□ 1.25
DDX39A-212ENST00000590260 DACT2Q5SW24 774 aa22.87■■□□□ 1.25
DDX39A-212ENST00000590260 RSBN1LQ6PCB5 846 aaPredicted RBP22.87■■□□□ 1.25
DDX39A-212ENST00000590260 SAMD7Q7Z3H4 446 aa22.87■■□□□ 1.25
DDX39A-212ENST00000590260 USP17L3A6NCW0 530 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 USP17L4A6NCW7 530 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 G3V3G9 751 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 RPS12P25398 132 aaKnown RBP22.86■■□□□ 1.25
DDX39A-212ENST00000590260 DCAF8Q5TAQ9 597 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 USP17L1Q7RTZ2 530 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 CNTROBQ8N137 903 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 CD209Q9NNX6 404 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 PGAP2Q9UHJ9 254 aa22.86■■□□□ 1.25
DDX39A-212ENST00000590260 KCNJ4P48050 445 aa22.85■■□□□ 1.25
DDX39A-212ENST00000590260 ATG9AQ7Z3C6 839 aa22.85■■□□□ 1.25
DDX39A-212ENST00000590260 TBC1D10BQ4KMP7 808 aaPredicted RBP22.84■■□□□ 1.25
DDX39A-212ENST00000590260 MROH5Q6ZUA9 1318 aa22.83■■□□□ 1.25
DDX39A-212ENST00000590260 ZNF280AP59817 542 aaPredicted RBP22.83■■□□□ 1.25
DDX39A-212ENST00000590260 UBE4AQ14139 1066 aa22.83■■□□□ 1.25
DDX39A-212ENST00000590260 AGBL3Q8NEM8 1001 aa22.83■■□□□ 1.25
DDX39A-212ENST00000590260 ASTN2O75129 1339 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-212ENST00000590260 IL1R1P14778 569 aa22.82■■□□□ 1.24
DDX39A-212ENST00000590260 STRIP1Q5VSL9 837 aa22.82■■□□□ 1.24
DDX39A-212ENST00000590260 CERS5Q8N5B7 392 aa22.82■■□□□ 1.24
DDX39A-212ENST00000590260 FAM84BQ96KN1 310 aaPredicted RBP22.82■■□□□ 1.24
DDX39A-212ENST00000590260 PA2G4Q9UQ80 394 aaKnown RBP22.82■■□□□ 1.24
DDX39A-212ENST00000590260 H7C1D1 291 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 EYA2O00167 538 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 TRAF5O00463 557 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 PDE8BO95263 885 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 GNAI3P08754 354 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 GYG1P46976 350 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 MTX1Q13505 466 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 DLK2Q6UY11 383 aa22.81■■□□□ 1.24
DDX39A-212ENST00000590260 FGFR2P21802 821 aa22.8■■□□□ 1.24
DDX39A-212ENST00000590260 GTF2IP78347 998 aa22.8■■□□□ 1.24
DDX39A-212ENST00000590260 METTL24Q5JXM2 366 aa22.8■■□□□ 1.24
DDX39A-212ENST00000590260 RBM26Q5T8P6 1007 aaKnown RBP22.79■■□□□ 1.24
DDX39A-212ENST00000590260 TTLL5Q6EMB2 1281 aa22.79■■□□□ 1.24
DDX39A-212ENST00000590260 DZIP1LQ8IYY4 767 aaKnown RBP22.79■■□□□ 1.24
DDX39A-212ENST00000590260 ZC3H15Q8WU90 426 aaKnown RBP22.79■■□□□ 1.24
DDX39A-212ENST00000590260 GLIS2Q9BZE0 524 aaPredicted RBP22.79■■□□□ 1.24
DDX39A-212ENST00000590260 SIL1Q9H173 461 aa22.79■■□□□ 1.24
DDX39A-212ENST00000590260 KIF4BQ2VIQ3 1234 aa22.78■■□□□ 1.24
DDX39A-212ENST00000590260 ZNF804AQ7Z570 1209 aa22.78■■□□□ 1.24
DDX39A-212ENST00000590260 TDRD7Q8NHU6 1098 aaKnown RBP22.78■■□□□ 1.24
DDX39A-212ENST00000590260 FBXW7Q969H0 707 aa22.78■■□□□ 1.24
DDX39A-212ENST00000590260 COPRSQ9NQ92 184 aa22.78■■□□□ 1.24
DDX39A-212ENST00000590260 POLR2AP24928 1970 aaKnown RBP22.78■■□□□ 1.24
DDX39A-212ENST00000590260 TRPM7Q96QT4 1865 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 PNMA6EA0A0J9YXQ4 647 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 USP17L8P0C7I0 530 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 FBXO33Q7Z6M2 555 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 PANK1Q8TE04 598 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 KLRG1Q96E93 195 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 CREBZFQ9NS37 354 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 JAG2Q9Y219 1238 aa22.77■■□□□ 1.24
DDX39A-212ENST00000590260 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.77■■□□□ 1.24
DDX39A-212ENST00000590260 ARAP2Q8WZ64 1704 aa22.77■■□□□ 1.23
DDX39A-212ENST00000590260 ZBTB7BO15156 539 aaPredicted RBP22.76■■□□□ 1.23
DDX39A-212ENST00000590260 CIAO1O76071 339 aa22.76■■□□□ 1.23
DDX39A-212ENST00000590260 CST9Q5W186 159 aa22.76■■□□□ 1.23
DDX39A-212ENST00000590260 MYOZ2Q9NPC6 264 aa22.76■■□□□ 1.23
DDX39A-212ENST00000590260 GNAI2P04899 355 aa22.75■■□□□ 1.23
DDX39A-212ENST00000590260 FBXO3Q9UK99 471 aa22.75■■□□□ 1.23
DDX39A-212ENST00000590260 SRGAP3O43295 1099 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 HIBADHP31937 336 aaKnown RBP22.74■■□□□ 1.23
DDX39A-212ENST00000590260 KIAA0825Q8IV33 1275 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 ZBED3Q96IU2 234 aaPredicted RBP22.74■■□□□ 1.23
DDX39A-212ENST00000590260 C1orf115Q9H7X2 142 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 RCAN3Q9UKA8 241 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 HDAC5Q9UQL6 1122 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 FAM205AQ6ZU69 1335 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 MYO3BQ8WXR4 1341 aa22.74■■□□□ 1.23
DDX39A-212ENST00000590260 TMEM88BA6NKF7 163 aa22.73■■□□□ 1.23
DDX39A-212ENST00000590260 SASH1O94885 1247 aa22.73■■□□□ 1.23
DDX39A-212ENST00000590260 SCARF1Q14162 830 aa22.73■■□□□ 1.23
DDX39A-212ENST00000590260 NBPF9Q3BBW0 867 aa22.73■■□□□ 1.23
DDX39A-212ENST00000590260 ITPRIPQ8IWB1 547 aa22.73■■□□□ 1.23
DDX39A-212ENST00000590260 FTSJ3Q8IY81 847 aaKnown RBP22.73■■□□□ 1.23
DDX39A-212ENST00000590260 PCDHAC2Q9Y5I4 1007 aa22.73■■□□□ 1.23
DDX39A-212ENST00000590260 ADM5C9JUS6 153 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms