RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
CCBE1-204ENST00000589419 DOCK2Q92608 1830 aa16.81■□□□□ 0.28
CCBE1-204ENST00000589419 KIAA1551Q9HCM1 1747 aa16.81■□□□□ 0.28
CCBE1-204ENST00000589419 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
CCBE1-204ENST00000589419 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
CCBE1-204ENST00000589419 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
CCBE1-204ENST00000589419 PAG1Q9NWQ8 432 aa16.8■□□□□ 0.28
CCBE1-204ENST00000589419 ATP6V0A2Q9Y487 856 aa16.8■□□□□ 0.28
CCBE1-204ENST00000589419 DUOX1Q9NRD9 1551 aa16.8■□□□□ 0.28
CCBE1-204ENST00000589419 PDS5AQ29RF7 1337 aaKnown RBP16.79■□□□□ 0.28
CCBE1-204ENST00000589419 RAD50Q92878 1312 aa16.79■□□□□ 0.28
CCBE1-204ENST00000589419 ATP2B4P23634 1241 aa16.79■□□□□ 0.28
CCBE1-204ENST00000589419 PHKA1P46020 1223 aa16.79■□□□□ 0.28
CCBE1-204ENST00000589419 LRRFIP1Q32MZ4 808 aaKnown RBP16.79■□□□□ 0.28
CCBE1-204ENST00000589419 CAVIN4Q5BKX8 364 aa16.79■□□□□ 0.28
CCBE1-204ENST00000589419 KBTBD3Q8NAB2 608 aa16.79■□□□□ 0.28
CCBE1-204ENST00000589419 FSD1Q9BTV5 496 aa16.79■□□□□ 0.28
CCBE1-204ENST00000589419 GNL3LQ9NVN8 582 aaKnown RBP16.79■□□□□ 0.28
CCBE1-204ENST00000589419 IRS2Q9Y4H2 1338 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 SEMA3EO15041 775 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 REC8O95072 547 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 ZBTB7AO95365 584 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 SEC24BO95487 1268 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 MCAMP43121 646 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 TTF1Q15361 905 aaPredicted RBP16.78■□□□□ 0.28
CCBE1-204ENST00000589419 RUFY2Q8WXA3 655 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 ESYT1Q9BSJ8 1104 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 DIAPH3Q9NSV4 1193 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
CCBE1-204ENST00000589419 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
CCBE1-204ENST00000589419 SNAP23O00161 211 aa16.77■□□□□ 0.28
CCBE1-204ENST00000589419 GOLIM4O00461 696 aa16.77■□□□□ 0.28
CCBE1-204ENST00000589419 EPB41L2O43491 1005 aaKnown RBP16.77■□□□□ 0.28
CCBE1-204ENST00000589419 MFAP1P55081 439 aaKnown RBP16.77■□□□□ 0.28
CCBE1-204ENST00000589419 GPSM2P81274 684 aa16.77■□□□□ 0.28
CCBE1-204ENST00000589419 ZNF622Q969S3 477 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCBE1-204ENST00000589419 TMX4Q9H1E5 349 aaPredicted RBP16.77■□□□□ 0.28
CCBE1-204ENST00000589419 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
CCBE1-204ENST00000589419 SLX4Q8IY92 1834 aa16.77■□□□□ 0.27
CCBE1-204ENST00000589419 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
CCBE1-204ENST00000589419 SCARF1Q14162 830 aa16.76■□□□□ 0.27
CCBE1-204ENST00000589419 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
CCBE1-204ENST00000589419 FBXO33Q7Z6M2 555 aa16.76■□□□□ 0.27
CCBE1-204ENST00000589419 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
CCBE1-204ENST00000589419 MAST2Q6P0Q8 1798 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 SGSM2O43147 1006 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 UFL1O94874 794 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 ZAP70P43403 619 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 BCAMP50895 628 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 FKBP4Q02790 459 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCBE1-204ENST00000589419 RASGRF1Q13972 1273 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
CCBE1-204ENST00000589419 VPS37DQ86XT2 251 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 SPATA5Q8NB90 893 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 EDC3Q96F86 508 aaKnown RBP16.75■□□□□ 0.27
CCBE1-204ENST00000589419 FAM84BQ96KN1 310 aaPredicted RBP16.75■□□□□ 0.27
CCBE1-204ENST00000589419 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 HMG20BQ9P0W2 317 aa16.75■□□□□ 0.27
CCBE1-204ENST00000589419 NSFL1CQ9UNZ2 370 aaKnown RBP16.75■□□□□ 0.27
CCBE1-204ENST00000589419 BRCA1P38398 1863 aaKnown RBP16.75■□□□□ 0.27
CCBE1-204ENST00000589419 ZFYP08048 801 aaPredicted RBP16.74■□□□□ 0.27
CCBE1-204ENST00000589419 CHRNA5P30532 468 aa16.74■□□□□ 0.27
CCBE1-204ENST00000589419 HIBADHP31937 336 aaKnown RBP16.74■□□□□ 0.27
CCBE1-204ENST00000589419 GYG1P46976 350 aa16.74■□□□□ 0.27
CCBE1-204ENST00000589419 TGFB2P61812 414 aa16.74■□□□□ 0.27
CCBE1-204ENST00000589419 GRIPAP1Q4V328 841 aa16.74■□□□□ 0.27
CCBE1-204ENST00000589419 TBC1D32Q96NH3 1257 aa16.74■□□□□ 0.27
CCBE1-204ENST00000589419 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.74■□□□□ 0.27
CCBE1-204ENST00000589419 DENND2AQ9ULE3 1009 aa16.74■□□□□ 0.27
CCBE1-204ENST00000589419 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
CCBE1-204ENST00000589419 SNED1Q8TER0 1413 aa16.73■□□□□ 0.27
CCBE1-204ENST00000589419 IGSF3O75054 1194 aa16.73■□□□□ 0.27
CCBE1-204ENST00000589419 ZSCAN25Q6NSZ9 544 aa16.73■□□□□ 0.27
CCBE1-204ENST00000589419 ZNF804AQ7Z570 1209 aa16.73■□□□□ 0.27
CCBE1-204ENST00000589419 TBC1D16Q8TBP0 767 aa16.73■□□□□ 0.27
CCBE1-204ENST00000589419 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
CCBE1-204ENST00000589419 NDUFB9Q9Y6M9 179 aa16.73■□□□□ 0.27
CCBE1-204ENST00000589419 PSDA5PKW4 1024 aaPredicted RBP16.72■□□□□ 0.27
CCBE1-204ENST00000589419 CYP2E1P05181 493 aaPredicted RBP16.72■□□□□ 0.27
CCBE1-204ENST00000589419 KLRK1P26718 216 aa16.72■□□□□ 0.27
CCBE1-204ENST00000589419 RBM25P49756 843 aaKnown RBP16.72■□□□□ 0.27
CCBE1-204ENST00000589419 NMIQ13287 307 aaPredicted RBP16.72■□□□□ 0.27
CCBE1-204ENST00000589419 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
CCBE1-204ENST00000589419 PI16Q6UXB8 463 aa16.72■□□□□ 0.27
CCBE1-204ENST00000589419 MPNDQ8N594 471 aa16.72■□□□□ 0.27
CCBE1-204ENST00000589419 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
CCBE1-204ENST00000589419 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
CCBE1-204ENST00000589419 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
CCBE1-204ENST00000589419 MYO5AQ9Y4I1 1855 aaKnown RBP16.71■□□□□ 0.27
CCBE1-204ENST00000589419 WTIPA6NIX2 430 aaPredicted RBP16.71■□□□□ 0.27
CCBE1-204ENST00000589419 RNF113AO15541 343 aaKnown RBP16.71■□□□□ 0.27
CCBE1-204ENST00000589419 DPP8Q6V1X1 898 aaPredicted RBP16.71■□□□□ 0.27
CCBE1-204ENST00000589419 ILDR2Q71H61 639 aa16.71■□□□□ 0.27
CCBE1-204ENST00000589419 TTLL6Q8N841 843 aa16.71■□□□□ 0.27
CCBE1-204ENST00000589419 C7orf43Q8WVR3 580 aa16.71■□□□□ 0.27
CCBE1-204ENST00000589419 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
CCBE1-204ENST00000589419 A0A0D9SFI3 127 aa16.7■□□□□ 0.26
CCBE1-204ENST00000589419 DPEP1P16444 411 aa16.7■□□□□ 0.26
CCBE1-204ENST00000589419 PTGER2P43116 358 aa16.7■□□□□ 0.26
CCBE1-204ENST00000589419 ZMYM1Q5SVZ6 1142 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms