RNA–Protein interactions for RNA: ENST00000589007.5

RETREG3-207, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 3

Gene RETREG3, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-207ENST00000589007 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
RETREG3-207ENST00000589007 PTCH2Q9Y6C5 1203 aa11.1□□□□□ -0.63
RETREG3-207ENST00000589007 UFL1O94874 794 aa11.09□□□□□ -0.63
RETREG3-207ENST00000589007 SASH1O94885 1247 aa11.09□□□□□ -0.63
RETREG3-207ENST00000589007 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
RETREG3-207ENST00000589007 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
RETREG3-207ENST00000589007 FAM89AQ96GI7 184 aa11.09□□□□□ -0.63
RETREG3-207ENST00000589007 MED23Q9ULK4 1368 aa11.08□□□□□ -0.64
RETREG3-207ENST00000589007 MANSC4A6NHS7 340 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-207ENST00000589007 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-207ENST00000589007 ZBTB48P10074 688 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-207ENST00000589007 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
RETREG3-207ENST00000589007 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
RETREG3-207ENST00000589007 ERO1AQ96HE7 468 aa11.08□□□□□ -0.64
RETREG3-207ENST00000589007 LRCH3Q96II8 777 aa11.08□□□□□ -0.64
RETREG3-207ENST00000589007 PPP2R1AP30153 589 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 PRKG1Q13976 671 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 KRT24Q2M2I5 525 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 HSP90AB3PQ58FF7 597 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 EFCC1Q9HA90 598 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 IRS2Q9Y4H2 1338 aa11.07□□□□□ -0.64
RETREG3-207ENST00000589007 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 CTGFP29279 349 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 RPS8P62241 208 aaKnown RBP11.06□□□□□ -0.64
RETREG3-207ENST00000589007 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 ARHGAP39Q9C0H5 1083 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 ANGEL1Q9UNK9 670 aaKnown RBP11.06□□□□□ -0.64
RETREG3-207ENST00000589007 CLSPNQ9HAW4 1339 aa11.06□□□□□ -0.64
RETREG3-207ENST00000589007 SP3Q02447 781 aa11.05□□□□□ -0.64
RETREG3-207ENST00000589007 TXNRD3Q86VQ6 643 aa11.05□□□□□ -0.64
RETREG3-207ENST00000589007 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
RETREG3-207ENST00000589007 ZC3H12CQ9C0D7 883 aaKnown RBP11.05□□□□□ -0.64
RETREG3-207ENST00000589007 GGA1Q9UJY5 639 aa11.05□□□□□ -0.64
RETREG3-207ENST00000589007 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
RETREG3-207ENST00000589007 EIF2S2P20042 333 aaKnown RBP11.04□□□□□ -0.64
RETREG3-207ENST00000589007 KLRK1P26718 216 aa11.04□□□□□ -0.64
RETREG3-207ENST00000589007 AIMP1Q12904 312 aaKnown RBP11.04□□□□□ -0.64
RETREG3-207ENST00000589007 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
RETREG3-207ENST00000589007 NFE2L2Q16236 605 aa11.04□□□□□ -0.64
RETREG3-207ENST00000589007 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
RETREG3-207ENST00000589007 COL25A1Q9BXS0 654 aaPredicted RBP11.04□□□□□ -0.64
RETREG3-207ENST00000589007 COL2A1P02458 1487 aaPredicted RBP11.04□□□□□ -0.64
RETREG3-207ENST00000589007 XDHP47989 1333 aa11.04□□□□□ -0.64
RETREG3-207ENST00000589007 PTPRFP10586 1907 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
RETREG3-207ENST00000589007 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
RETREG3-207ENST00000589007 INHBEP58166 350 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
RETREG3-207ENST00000589007 MTFR1Q15390 333 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 CDAN1Q8IWY9 1227 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 CERS5Q8N5B7 392 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 PLBD2Q8NHP8 589 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 BRI3BPQ8WY22 251 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 ZNF804BA4D1E1 1349 aa11.03□□□□□ -0.64
RETREG3-207ENST00000589007 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.65
RETREG3-207ENST00000589007 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
RETREG3-207ENST00000589007 APOBEC3FQ8IUX4 373 aaKnown RBP11.02□□□□□ -0.65
RETREG3-207ENST00000589007 TSPYL4Q9UJ04 414 aa11.02□□□□□ -0.65
RETREG3-207ENST00000589007 ADGRA2Q96PE1 1338 aa11.02□□□□□ -0.65
RETREG3-207ENST00000589007 DDX60LQ5H9U9 1706 aaKnown RBP11.01□□□□□ -0.65
RETREG3-207ENST00000589007 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
RETREG3-207ENST00000589007 CNGB1Q14028 1251 aaPredicted RBP11.01□□□□□ -0.65
RETREG3-207ENST00000589007 STRIP1Q5VSL9 837 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 FAM43AQ8N2R8 423 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 CFAP53Q96M91 514 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 TMEM106CQ9BVX2 250 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 DEFB129Q9H1M3 183 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 MYO3BQ8WXR4 1341 aa11.01□□□□□ -0.65
RETREG3-207ENST00000589007 UNCXA6NJT0 531 aa11□□□□□ -0.65
RETREG3-207ENST00000589007 MYCP01106 439 aaPredicted RBP11□□□□□ -0.65
RETREG3-207ENST00000589007 NF2P35240 595 aa11□□□□□ -0.65
RETREG3-207ENST00000589007 NBPF12Q5TAG4 269 aaPredicted RBP11□□□□□ -0.65
RETREG3-207ENST00000589007 MTMR14Q8NCE2 650 aa11□□□□□ -0.65
RETREG3-207ENST00000589007 NUDCQ9Y266 331 aa11□□□□□ -0.65
RETREG3-207ENST00000589007 TTC28Q96AY4 2481 aa11□□□□□ -0.65
RETREG3-207ENST00000589007 DOCK3Q8IZD9 2030 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-207ENST00000589007 ZBTB38Q8NAP3 1195 aaPredicted RBP10.99□□□□□ -0.65
RETREG3-207ENST00000589007 TEPSINQ96N21 525 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 PLXNB2O15031 1838 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 FRMPD3Q5JV73 1810 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 PHIPQ8WWQ0 1821 aa10.99□□□□□ -0.65
RETREG3-207ENST00000589007 MAST2Q6P0Q8 1798 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 GJA8P48165 433 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 LACTBP83111 547 aaPredicted RBP10.98□□□□□ -0.65
RETREG3-207ENST00000589007 SLC4A8Q2Y0W8 1093 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 Q7L0L9 218 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 KIAA0825Q8IV33 1275 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 BABAM1Q9NWV8 329 aa10.98□□□□□ -0.65
RETREG3-207ENST00000589007 MINPP1Q9UNW1 487 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms