RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TAF6LQ9Y6J9 622 aa18.14■□□□□ 0.49
MBD1-217ENST00000588937 MROH5Q6ZUA9 1318 aa18.13■□□□□ 0.49
MBD1-217ENST00000588937 PDE8BO95263 885 aa18.13■□□□□ 0.49
MBD1-217ENST00000588937 CHGBP05060 677 aa18.13■□□□□ 0.49
MBD1-217ENST00000588937 HSPD1P10809 573 aaKnown RBP18.13■□□□□ 0.49
MBD1-217ENST00000588937 ST3GAL1Q11201 340 aa18.13■□□□□ 0.49
MBD1-217ENST00000588937 ZNF772Q68DY9 489 aaPredicted RBP18.13■□□□□ 0.49
MBD1-217ENST00000588937 UTP14AQ9BVJ6 771 aaKnown RBP18.13■□□□□ 0.49
MBD1-217ENST00000588937 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.497e-7■■■■□ 23.2
MBD1-217ENST00000588937 CTNNA3Q9UI47 895 aa18.13■□□□□ 0.49
MBD1-217ENST00000588937 TTF1Q15361 905 aaPredicted RBP18.12■□□□□ 0.49
MBD1-217ENST00000588937 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 CHAMP1Q96JM3 812 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 MTMR6Q9Y217 621 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 MYH7P12883 1935 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 LARP1BQ659C4 914 aaKnown RBP18.12■□□□□ 0.49
MBD1-217ENST00000588937 DHX32Q7L7V1 743 aaKnown RBP18.12■□□□□ 0.49
MBD1-217ENST00000588937 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 VGLL2Q8N8G2 317 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 APPBP2Q92624 585 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
MBD1-217ENST00000588937 LRP5O75197 1615 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 BTAF1O14981 1849 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 KCNQ2O43526 872 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 PHF14O94880 888 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 CAMTA2O94983 1202 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 UQCRFS1P1P0C7P4 283 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 ZAP70P43403 619 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 FGD1P98174 961 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 Q6ZUG5 572 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 ANP32BQ92688 251 aaKnown RBP18.11■□□□□ 0.49
MBD1-217ENST00000588937 CHMP4CQ96CF2 233 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 ZNF652Q9Y2D9 606 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 LAMA4Q16363 1823 aa18.11■□□□□ 0.49
MBD1-217ENST00000588937 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
MBD1-217ENST00000588937 M0R2C6 588 aa18.1■□□□□ 0.49
MBD1-217ENST00000588937 WASHC4Q2M389 1173 aa18.1■□□□□ 0.49
MBD1-217ENST00000588937 SUSD4Q5VX71 490 aa18.1■□□□□ 0.49
MBD1-217ENST00000588937 BRWD3Q6RI45 1802 aa18.1■□□□□ 0.49
MBD1-217ENST00000588937 ITPK1Q13572 414 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 PUM3Q15397 648 aaKnown RBP18.09■□□□□ 0.49
MBD1-217ENST00000588937 FOXD4L6Q3SYB3 417 aaPredicted RBP18.09■□□□□ 0.49
MBD1-217ENST00000588937 FOXD4L3Q6VB84 417 aaPredicted RBP18.09■□□□□ 0.49
MBD1-217ENST00000588937 LPIN2Q92539 896 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 GTF3C6Q969F1 213 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 OSBP2Q969R2 916 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 TMEM63CQ9P1W3 806 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 ARAP2Q8WZ64 1704 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 VPS37CA5D8V6 355 aaPredicted RBP18.09■□□□□ 0.49
MBD1-217ENST00000588937 NASPP49321 788 aaPredicted RBP18.09■□□□□ 0.49
MBD1-217ENST00000588937 LRSAM1Q6UWE0 723 aa18.09■□□□□ 0.49
MBD1-217ENST00000588937 RBM27Q9P2N5 1060 aaKnown RBP18.09■□□□□ 0.49
MBD1-217ENST00000588937 LAMB2P55268 1798 aa18.08■□□□□ 0.49
MBD1-217ENST00000588937 TCHHQ07283 1943 aa18.08■□□□□ 0.49
MBD1-217ENST00000588937 RTL9Q8NET4 1388 aa18.08■□□□□ 0.49
MBD1-217ENST00000588937 UBE2HP62256 183 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 RBM6P78332 1123 aaKnown RBP18.08■□□□□ 0.48
MBD1-217ENST00000588937 COL9A3Q14050 684 aaPredicted RBP18.08■□□□□ 0.48
MBD1-217ENST00000588937 SCARF1Q14162 830 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 IMMTQ16891 758 aaKnown RBP18.08■□□□□ 0.48
MBD1-217ENST00000588937 SLFNL1Q499Z3 407 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 MPHOSPH8Q99549 860 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 LLPHQ9BRT6 129 aaKnown RBP18.08■□□□□ 0.48
MBD1-217ENST00000588937 CNPY2Q9Y2B0 182 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 LY75O60449 1722 aa18.08■□□□□ 0.48
MBD1-217ENST00000588937 AKAP11Q9UKA4 1901 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 E7EWF7 191 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 SLC5A1P13866 664 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 ARID4AP29374 1257 aaPredicted RBP18.07■□□□□ 0.48
MBD1-217ENST00000588937 MCAMP43121 646 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 STOX1Q6ZVD7 989 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 FAM43AQ8N2R8 423 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 MYH14Q7Z406 1995 aaKnown RBP18.07■□□□□ 0.48
MBD1-217ENST00000588937 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
MBD1-217ENST00000588937 EXOSC10Q01780 885 aaKnown RBP18.07■□□□□ 0.48
MBD1-217ENST00000588937 STK3Q13188 491 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 CLEC4GQ6UXB4 293 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 AGXT2Q9BYV1 514 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 GDPD2Q9HCC8 539 aa18.07■□□□□ 0.48
MBD1-217ENST00000588937 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
MBD1-217ENST00000588937 NIP7Q9Y221 180 aaKnown RBP eCLIP18.07■□□□□ 0.48
MBD1-217ENST00000588937 BCORQ6W2J9 1755 aa18.06■□□□□ 0.48
MBD1-217ENST00000588937 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
MBD1-217ENST00000588937 FGFR2P21802 821 aa18.06■□□□□ 0.48
MBD1-217ENST00000588937 CCDC102BQ68D86 513 aa18.06■□□□□ 0.48
MBD1-217ENST00000588937 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
MBD1-217ENST00000588937 FBXL16Q8N461 479 aa18.06■□□□□ 0.48
MBD1-217ENST00000588937 BRF1Q92994 677 aa18.06■□□□□ 0.48
MBD1-217ENST00000588937 RGL2O15211 777 aa18.05■□□□□ 0.48
MBD1-217ENST00000588937 PFKFB2O60825 505 aa18.05■□□□□ 0.48
MBD1-217ENST00000588937 GADD45BO75293 160 aaPredicted RBP18.05■□□□□ 0.48
MBD1-217ENST00000588937 LETM1O95202 739 aaPredicted RBP18.05■□□□□ 0.48
MBD1-217ENST00000588937 ADD2P35612 726 aa18.05■□□□□ 0.48
MBD1-217ENST00000588937 IGHMBP2P38935 993 aaKnown RBP18.05■□□□□ 0.48
MBD1-217ENST00000588937 CCDC173Q0VFZ6 552 aa18.05■□□□□ 0.48
MBD1-217ENST00000588937 KIF3AQ9Y496 699 aa18.05■□□□□ 0.48
MBD1-217ENST00000588937 SYCE3A1L190 88 aa18.04■□□□□ 0.48
MBD1-217ENST00000588937 NTSR2O95665 410 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms