RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 NIM1KQ8IY84 436 aa23.45■■□□□ 1.34
CLPTM1-209ENST00000588855 JDP2Q8WYK2 163 aa23.45■■□□□ 1.34
CLPTM1-209ENST00000588855 DBNDD1Q9H9R9 158 aa23.45■■□□□ 1.34
CLPTM1-209ENST00000588855 APBB1O00213 710 aa23.44■■□□□ 1.34
CLPTM1-209ENST00000588855 NEFLP07196 543 aa23.44■■□□□ 1.34
CLPTM1-209ENST00000588855 C15orf52Q6ZUT6 534 aaKnown RBP23.44■■□□□ 1.34
CLPTM1-209ENST00000588855 HDAC1Q13547 482 aaPredicted RBP23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 ERC1Q8IUD2 1116 aa23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 LPIN2Q92539 896 aa23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 DCTPP1Q9H773 170 aa23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 PSME4Q14997 1843 aa23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 ECE2O60344 883 aa23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 SLC5A1P13866 664 aa23.43■■□□□ 1.34
CLPTM1-209ENST00000588855 A0A1B0GUL7 405 aa23.42■■□□□ 1.34
CLPTM1-209ENST00000588855 YDJCA8MPS7 323 aa23.42■■□□□ 1.34
CLPTM1-209ENST00000588855 GYG1P46976 350 aa23.42■■□□□ 1.34
CLPTM1-209ENST00000588855 RHPN1Q8TCX5 695 aa23.42■■□□□ 1.34
CLPTM1-209ENST00000588855 AKAP2Q9Y2D5 859 aa23.42■■□□□ 1.34
CLPTM1-209ENST00000588855 ZC3H4Q9UPT8 1303 aaKnown RBP23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 ZNF646O15015 1829 aaPredicted RBP23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 G3V3G9 751 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 FZD9O00144 591 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 RAB11FIP3O75154 756 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 TIMM10P62072 90 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 TNNI3KQ59H18 835 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 DCAF8Q5TAQ9 597 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 KIF1BPQ96EK5 621 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 ZNRF3Q9ULT6 936 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 FPGT-TNNI3KV9GXZ4 949 aa23.41■■□□□ 1.34
CLPTM1-209ENST00000588855 ZNF541Q9H0D2 1346 aa23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 MYH13Q9UKX3 1938 aa23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 ADORA1P30542 326 aa23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 FAM84BQ96KN1 310 aaPredicted RBP23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 COA1Q9GZY4 146 aa23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 IL1RAPL2Q9NP60 686 aa23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 GPR108Q9NPR9 543 aa23.4■■□□□ 1.34
CLPTM1-209ENST00000588855 ZNF804AQ7Z570 1209 aa23.39■■□□□ 1.34
CLPTM1-209ENST00000588855 IGHDP01880 384 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 NEUROD6Q96NK8 337 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 RWDD1Q9H446 243 aaPredicted RBP23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 CD209Q9NNX6 404 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 HIBADHP31937 336 aaKnown RBP23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 BCAMP50895 628 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 XAGE2Q96GT9 111 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 KCNQ5Q9NR82 932 aa23.38■■□□□ 1.33
CLPTM1-209ENST00000588855 PODNQ7Z5L7 613 aa23.37■■□□□ 1.33
CLPTM1-209ENST00000588855 FBXO33Q7Z6M2 555 aa23.37■■□□□ 1.33
CLPTM1-209ENST00000588855 EAF2Q96CJ1 260 aaPredicted RBP23.37■■□□□ 1.33
CLPTM1-209ENST00000588855 LRRCC1Q9C099 1032 aa23.37■■□□□ 1.33
CLPTM1-209ENST00000588855 SMARCA5O60264 1052 aaPredicted RBP23.36■■□□□ 1.33
CLPTM1-209ENST00000588855 RAD17O75943 681 aa23.36■■□□□ 1.33
CLPTM1-209ENST00000588855 EIF6P56537 245 aaKnown RBP23.36■■□□□ 1.33
CLPTM1-209ENST00000588855 CXCL9Q07325 125 aa23.36■■□□□ 1.33
CLPTM1-209ENST00000588855 VPS37DQ86XT2 251 aa23.36■■□□□ 1.33
CLPTM1-209ENST00000588855 BCL11AQ9H165 835 aa23.36■■□□□ 1.33
CLPTM1-209ENST00000588855 IL1R1P14778 569 aa23.35■■□□□ 1.33
CLPTM1-209ENST00000588855 DBNDD2Q9BQY9 259 aa23.35■■□□□ 1.33
CLPTM1-209ENST00000588855 CCDC8Q9H0W5 538 aaPredicted RBP23.35■■□□□ 1.33
CLPTM1-209ENST00000588855 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
CLPTM1-209ENST00000588855 IQSEC3Q9UPP2 1182 aaPredicted RBP23.35■■□□□ 1.33
CLPTM1-209ENST00000588855 PHKA1P46020 1223 aa23.34■■□□□ 1.33
CLPTM1-209ENST00000588855 AACSQ86V21 672 aa23.34■■□□□ 1.33
CLPTM1-209ENST00000588855 CLASRPQ8N2M8 674 aaKnown RBP23.34■■□□□ 1.33
CLPTM1-209ENST00000588855 GCC1Q96CN9 775 aa23.34■■□□□ 1.33
CLPTM1-209ENST00000588855 CCDC102BQ68D86 513 aa23.33■■□□□ 1.33
CLPTM1-209ENST00000588855 CIAPIN1Q6FI81 312 aa23.33■■□□□ 1.33
CLPTM1-209ENST00000588855 TDRD7Q8NHU6 1098 aaKnown RBP23.33■■□□□ 1.33
CLPTM1-209ENST00000588855 DBNLQ9UJU6 430 aaKnown RBP23.33■■□□□ 1.33
CLPTM1-209ENST00000588855 GJA3Q9Y6H8 435 aa23.33■■□□□ 1.32
CLPTM1-209ENST00000588855 COL1A1P02452 1464 aaPredicted RBP23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 GLTPD2A6NH11 291 aa23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 PSMD14O00487 310 aa23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 DDNO94850 711 aaPredicted RBP23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 GORABQ5T7V8 394 aa23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 SMC5Q8IY18 1101 aa23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 FBXW7Q969H0 707 aa23.32■■□□□ 1.32
CLPTM1-209ENST00000588855 YY1P25490 414 aa23.31■■□□□ 1.32
CLPTM1-209ENST00000588855 GPC2Q8N158 579 aa23.31■■□□□ 1.32
CLPTM1-209ENST00000588855 JAG2Q9Y219 1238 aa23.31■■□□□ 1.32
CLPTM1-209ENST00000588855 USP17L3A6NCW0 530 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 USP17L4A6NCW7 530 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 GTF2IP78347 998 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 TNIP1Q15025 636 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 DPY19L2Q6NUT2 758 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 USP17L1Q7RTZ2 530 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 WDR90Q96KV7 1748 aa23.3■■□□□ 1.32
CLPTM1-209ENST00000588855 FRAT2O75474 233 aaPredicted RBP23.29■■□□□ 1.32
CLPTM1-209ENST00000588855 ANKRD45Q5TZF3 282 aa23.29■■□□□ 1.32
CLPTM1-209ENST00000588855 ZNF526Q8TF50 670 aaPredicted RBP23.29■■□□□ 1.32
CLPTM1-209ENST00000588855 AKAP11Q9UKA4 1901 aa23.29■■□□□ 1.32
CLPTM1-209ENST00000588855 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 DACT2Q5SW24 774 aa23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 STRIP1Q5VSL9 837 aa23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 TTLL5Q6EMB2 1281 aa23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 MXD3Q9BW11 206 aa23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 GNL3LQ9NVN8 582 aaKnown RBP23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 VIL1P09327 827 aaKnown RBP23.28■■□□□ 1.32
CLPTM1-209ENST00000588855 CHAF1AQ13111 956 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms