RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SOX10P56693 466 aa17.83■□□□□ 0.44
CLPTM1-208ENST00000588274 TXNRD3Q86VQ6 643 aa17.83■□□□□ 0.44
CLPTM1-208ENST00000588274 BSDC1Q9NW68 430 aaPredicted RBP17.83■□□□□ 0.44
CLPTM1-208ENST00000588274 LAMB1P07942 1786 aa17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 PI4KAP2A4QPH2 592 aa17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 KLRK1P26718 216 aa17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 PRAMEF18Q5VWM3 479 aa17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 KSR2Q6VAB6 950 aa17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 CTU1Q7Z7A3 348 aaKnown RBP17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 PI4KAP1Q8N8J0 262 aa17.82■□□□□ 0.44
CLPTM1-208ENST00000588274 IRS2Q9Y4H2 1338 aa17.81■□□□□ 0.44
CLPTM1-208ENST00000588274 MKI67P46013 3256 aaKnown RBP17.81■□□□□ 0.44
CLPTM1-208ENST00000588274 WNT10BO00744 389 aa17.81■□□□□ 0.44
CLPTM1-208ENST00000588274 CASP7P55210 303 aa17.81■□□□□ 0.44
CLPTM1-208ENST00000588274 CWF19L2Q2TBE0 894 aaKnown RBP17.81■□□□□ 0.44
CLPTM1-208ENST00000588274 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
CLPTM1-208ENST00000588274 SSC5DA1L4H1 1573 aa17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 NEURL1BA8MQ27 555 aa17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 DDX58O95786 925 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 CCT4P50991 539 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 ZBED3Q96IU2 234 aaPredicted RBP17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 CDC5LQ99459 802 aaKnown RBP17.8■□□□□ 0.44
CLPTM1-208ENST00000588274 G3V3G9 751 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 UBE2Q2LH0YL09 131 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 H7C1W4 665 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 DCAF8Q5TAQ9 597 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 STRIP1Q5VSL9 837 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 G2E3Q7L622 706 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 TSR2Q969E8 191 aaKnown RBP17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 BRCA2P51587 3418 aa17.79■□□□□ 0.44
CLPTM1-208ENST00000588274 COA1Q9GZY4 146 aa17.78■□□□□ 0.44
CLPTM1-208ENST00000588274 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
CLPTM1-208ENST00000588274 CENPFP49454 3210 aa17.78■□□□□ 0.44
CLPTM1-208ENST00000588274 MYO3BQ8WXR4 1341 aa17.77■□□□□ 0.44
CLPTM1-208ENST00000588274 SASH1O94885 1247 aa17.77■□□□□ 0.44
CLPTM1-208ENST00000588274 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.44
CLPTM1-208ENST00000588274 PLA2G12BQ9BX93 195 aa17.77■□□□□ 0.44
CLPTM1-208ENST00000588274 TBC1D8O95759 1140 aa17.76■□□□□ 0.43
CLPTM1-208ENST00000588274 TM4SF4P48230 202 aa17.76■□□□□ 0.43
CLPTM1-208ENST00000588274 NOM1Q5C9Z4 860 aaKnown RBP17.76■□□□□ 0.43
CLPTM1-208ENST00000588274 UBE3BQ7Z3V4 1068 aa17.76■□□□□ 0.43
CLPTM1-208ENST00000588274 CFHR5Q9BXR6 569 aa17.76■□□□□ 0.43
CLPTM1-208ENST00000588274 COL1A1P02452 1464 aaPredicted RBP17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 CSF1RP07333 972 aa17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 GCKRQ14397 625 aa17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 CCDC184Q52MB2 194 aa17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 LDLRAD1Q5T700 205 aa17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 R3HDMLQ9H3Y0 253 aa17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 ECM29Q5VYK3 1845 aa17.75■□□□□ 0.43
CLPTM1-208ENST00000588274 ZNF804BA4D1E1 1349 aa17.74■□□□□ 0.43
CLPTM1-208ENST00000588274 CERS5Q8N5B7 392 aa17.74■□□□□ 0.43
CLPTM1-208ENST00000588274 LEMD3Q9Y2U8 911 aa17.74■□□□□ 0.43
CLPTM1-208ENST00000588274 ITGA6P23229 1130 aa17.73■□□□□ 0.43
CLPTM1-208ENST00000588274 PTPN12Q05209 780 aaKnown RBP17.73■□□□□ 0.43
CLPTM1-208ENST00000588274 CCDC27Q2M243 656 aa17.73■□□□□ 0.43
CLPTM1-208ENST00000588274 FZD1Q9UP38 647 aa17.73■□□□□ 0.43
CLPTM1-208ENST00000588274 AOX1Q06278 1338 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 GPR25O00155 361 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 SNAP23O00161 211 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 NEXNQ0ZGT2 675 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 KIAA0825Q8IV33 1275 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 OGFOD1Q8N543 542 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 PCDHAC2Q9Y5I4 1007 aa17.72■□□□□ 0.43
CLPTM1-208ENST00000588274 MMP14P50281 582 aa17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 FLIIQ13045 1269 aa17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 MKRN3Q13064 507 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 APOBEC3FQ8IUX4 373 aaKnown RBP17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 CHMP4AQ9BY43 222 aa17.71■□□□□ 0.43
CLPTM1-208ENST00000588274 IGHMBP2P38935 993 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 GTF2IP78347 998 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 CHRNDQ07001 517 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 PRPF38BQ5VTL8 546 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 SPRYD7Q5W111 196 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 C15orf52Q6ZUT6 534 aaKnown RBP17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 FBXW7Q969H0 707 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 STK31Q9BXU1 1019 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 CD209Q9NNX6 404 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 OTOFQ9HC10 1997 aa17.7■□□□□ 0.42
CLPTM1-208ENST00000588274 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
CLPTM1-208ENST00000588274 MTMR14Q8NCE2 650 aa17.69■□□□□ 0.42
CLPTM1-208ENST00000588274 ANKRD2Q9GZV1 360 aa17.69■□□□□ 0.42
CLPTM1-208ENST00000588274 IL16Q14005 1332 aa17.69■□□□□ 0.42
CLPTM1-208ENST00000588274 FANCIQ9NVI1 1328 aa17.69■□□□□ 0.42
CLPTM1-208ENST00000588274 FOXO4P98177 505 aa17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 SREBF2Q12772 1141 aa17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 PRKG1Q13976 671 aa17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 TTLL12Q14166 644 aaPredicted RBP17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 FBXO46Q6PJ61 603 aaPredicted RBP17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 LINS1Q8NG48 757 aa17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 ARAP2Q8WZ64 1704 aa17.68■□□□□ 0.42
CLPTM1-208ENST00000588274 NF2P35240 595 aa17.67■□□□□ 0.42
CLPTM1-208ENST00000588274 DNAAF4Q8WXU2 420 aa17.67■□□□□ 0.42
CLPTM1-208ENST00000588274 CLMNQ96JQ2 1002 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms