RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 ZNF609O15014 1411 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 PDE4AP27815 886 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 ADORA1P30542 326 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 CCDC158Q5M9N0 1113 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 VPS37DQ86XT2 251 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 OTUD7AQ8TE49 926 aaPredicted RBP17.3■□□□□ 0.36
CCDC130-208ENST00000588071 EYA3Q99504 573 aa17.3■□□□□ 0.36
CCDC130-208ENST00000588071 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
CCDC130-208ENST00000588071 RIMBP2O15034 1052 aa17.29■□□□□ 0.36
CCDC130-208ENST00000588071 MX1P20591 662 aa17.29■□□□□ 0.36
CCDC130-208ENST00000588071 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
CCDC130-208ENST00000588071 PLEKHM2Q8IWE5 1019 aa17.29■□□□□ 0.36
CCDC130-208ENST00000588071 ZC3H12CQ9C0D7 883 aaKnown RBP17.29■□□□□ 0.36
CCDC130-208ENST00000588071 TLR7Q9NYK1 1049 aaKnown RBP17.29■□□□□ 0.36
CCDC130-208ENST00000588071 G3V3G9 751 aa17.28■□□□□ 0.36
CCDC130-208ENST00000588071 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
CCDC130-208ENST00000588071 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
CCDC130-208ENST00000588071 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
CCDC130-208ENST00000588071 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
CCDC130-208ENST00000588071 LTBP1Q14766 1721 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 ARAP2Q8WZ64 1704 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 HIBADHP31937 336 aaKnown RBP17.27■□□□□ 0.36
CCDC130-208ENST00000588071 GYG1P46976 350 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 BCAMP50895 628 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 PDE1AP54750 535 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 PSMD1Q99460 953 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 RTFDC1Q9BY42 306 aaPredicted RBP17.27■□□□□ 0.36
CCDC130-208ENST00000588071 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
CCDC130-208ENST00000588071 GNL3LQ9NVN8 582 aaKnown RBP17.27■□□□□ 0.36
CCDC130-208ENST00000588071 TTC41PQ6P2S7 1318 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 CHD4Q14839 1912 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 ERC2O15083 957 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 KLRK1P26718 216 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 FKBP4Q02790 459 aaKnown RBP eCLIP17.26■□□□□ 0.35
CCDC130-208ENST00000588071 GPR162Q16538 588 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 CCDC102BQ68D86 513 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 ARHGAP27Q6ZUM4 889 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 C15orf52Q6ZUT6 534 aaKnown RBP17.26■□□□□ 0.35
CCDC130-208ENST00000588071 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
CCDC130-208ENST00000588071 TAOK3Q9H2K8 898 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 CCDC88AQ3V6T2 1871 aa17.26■□□□□ 0.35
CCDC130-208ENST00000588071 UQCRFS1P1P0C7P4 283 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 PHKA1P46020 1223 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 TSHZ3Q63HK5 1081 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 ZNF804AQ7Z570 1209 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 FBXO33Q7Z6M2 555 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 STAP2Q9UGK3 403 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 MED23Q9ULK4 1368 aa17.25■□□□□ 0.35
CCDC130-208ENST00000588071 MYH13Q9UKX3 1938 aa17.24■□□□□ 0.35
CCDC130-208ENST00000588071 PPIP5K2O43314 1243 aa17.24■□□□□ 0.35
CCDC130-208ENST00000588071 FRAT2O75474 233 aaPredicted RBP17.24■□□□□ 0.35
CCDC130-208ENST00000588071 BOLA2Q9H3K6 86 aa17.24■□□□□ 0.35
CCDC130-208ENST00000588071 OSBPL3Q9H4L5 887 aa17.24■□□□□ 0.35
CCDC130-208ENST00000588071 ZNF277Q9NRM2 450 aaPredicted RBP17.24■□□□□ 0.35
CCDC130-208ENST00000588071 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 SALL3Q9BXA9 1300 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
CCDC130-208ENST00000588071 ATP5JP18859 108 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 AOC3Q16853 763 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 COA1Q9GZY4 146 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
CCDC130-208ENST00000588071 AOX1Q06278 1338 aa17.22■□□□□ 0.35
CCDC130-208ENST00000588071 IRS2Q9Y4H2 1338 aa17.22■□□□□ 0.35
CCDC130-208ENST00000588071 SNED1Q8TER0 1413 aa17.22■□□□□ 0.35
CCDC130-208ENST00000588071 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC130-208ENST00000588071 IARSP41252 1262 aaKnown RBP17.22■□□□□ 0.35
CCDC130-208ENST00000588071 LARGE2Q8N3Y3 721 aa17.22■□□□□ 0.35
CCDC130-208ENST00000588071 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
CCDC130-208ENST00000588071 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
CCDC130-208ENST00000588071 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
CCDC130-208ENST00000588071 ARID4AP29374 1257 aaPredicted RBP17.21■□□□□ 0.35
CCDC130-208ENST00000588071 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
CCDC130-208ENST00000588071 PI4K2BQ8TCG2 481 aa17.21■□□□□ 0.35
CCDC130-208ENST00000588071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCDC130-208ENST00000588071 DENND2AQ9ULE3 1009 aa17.21■□□□□ 0.35
CCDC130-208ENST00000588071 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
CCDC130-208ENST00000588071 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
CCDC130-208ENST00000588071 NFKBIEO00221 500 aa17.2■□□□□ 0.34
CCDC130-208ENST00000588071 RASSF7Q02833 373 aa17.2■□□□□ 0.34
CCDC130-208ENST00000588071 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
CCDC130-208ENST00000588071 TDRD7Q8NHU6 1098 aaKnown RBP17.2■□□□□ 0.34
CCDC130-208ENST00000588071 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
CCDC130-208ENST00000588071 SNRKQ9NRH2 765 aa17.2■□□□□ 0.34
CCDC130-208ENST00000588071 AK9Q5TCS8 1911 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 TRIM6-TRIM34B2RNG4 842 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 SEMA3EO15041 775 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 MAP4K4O95819 1239 aaPredicted RBP17.19■□□□□ 0.34
CCDC130-208ENST00000588071 IL1R1P14778 569 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 MCAMP43121 646 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 PODNQ7Z5L7 613 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 NIM1KQ8IY84 436 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 SPATA5Q8NB90 893 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 JDP2Q8WYK2 163 aa17.19■□□□□ 0.34
CCDC130-208ENST00000588071 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
CCDC130-208ENST00000588071 HAUS7Q99871 368 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms