RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
TPM4-207ENST00000588032 H7C1D1 291 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 PLIN1O60240 522 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 HSPA6P17066 643 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 EPS15P42566 896 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
TPM4-207ENST00000588032 MTX1Q13505 466 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 PUS3Q9BZE2 481 aaKnown RBP12.61□□□□□ -0.39
TPM4-207ENST00000588032 ADARB2Q9NS39 739 aaKnown RBP12.61□□□□□ -0.39
TPM4-207ENST00000588032 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
TPM4-207ENST00000588032 TNNQ9UQP3 1299 aa12.61□□□□□ -0.39
TPM4-207ENST00000588032 EYA2O00167 538 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 CIAO1O76071 339 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 PDE8BO95263 885 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 MMP14P50281 582 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
TPM4-207ENST00000588032 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 EAPPQ56P03 285 aaPredicted RBP12.6□□□□□ -0.39
TPM4-207ENST00000588032 METTL24Q5JXM2 366 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 STRIP1Q5VSL9 837 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 ZNF804AQ7Z570 1209 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 TXNRD3Q86VQ6 643 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 ITPRIPQ8IWB1 547 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.6□□□□□ -0.39
TPM4-207ENST00000588032 KCNQ5Q9NR82 932 aa12.6□□□□□ -0.39
TPM4-207ENST00000588032 ZBTB7BO15156 539 aaPredicted RBP12.59□□□□□ -0.39
TPM4-207ENST00000588032 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
TPM4-207ENST00000588032 KLHDC4Q8TBB5 520 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
TPM4-207ENST00000588032 CD209Q9NNX6 404 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 COPRSQ9NQ92 184 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
TPM4-207ENST00000588032 SPEF2Q9C093 1822 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 MYO3BQ8WXR4 1341 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 IRS2Q9Y4H2 1338 aa12.59□□□□□ -0.39
TPM4-207ENST00000588032 ZNF609O15014 1411 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 RLBP1P12271 317 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 IL1R1P14778 569 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
TPM4-207ENST00000588032 APLP1P51693 650 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 TTLL5Q6EMB2 1281 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 MICALL2Q8IY33 904 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 VGLL2Q8N8G2 317 aa12.58□□□□□ -0.4
TPM4-207ENST00000588032 ZC3H15Q8WU90 426 aaKnown RBP12.58□□□□□ -0.4
TPM4-207ENST00000588032 SNAP23O00161 211 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 IFIT1P09914 478 aaKnown RBP12.57□□□□□ -0.4
TPM4-207ENST00000588032 POTEIP0CG38 1075 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 POTEJP0CG39 1038 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 KLRK1P26718 216 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 HIBADHP31937 336 aaKnown RBP12.57□□□□□ -0.4
TPM4-207ENST00000588032 PUM3Q15397 648 aaKnown RBP12.57□□□□□ -0.4
TPM4-207ENST00000588032 CAVIN4Q5BKX8 364 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 GMLQ99445 158 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 CEP126Q9P2H0 1117 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
TPM4-207ENST00000588032 SASH1O94885 1247 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 ZNF280AP59817 542 aaPredicted RBP12.56□□□□□ -0.4
TPM4-207ENST00000588032 FKBP1AP62942 108 aaKnown RBP12.56□□□□□ -0.4
TPM4-207ENST00000588032 ATP8B2P98198 1209 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 DACT2Q5SW24 774 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 ATG9AQ7Z3C6 839 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 CNTROBQ8N137 903 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 OGFOD1Q8N543 542 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 PANK1Q8TE04 598 aa12.56□□□□□ -0.4
TPM4-207ENST00000588032 FAM84BQ96KN1 310 aaPredicted RBP12.56□□□□□ -0.4
TPM4-207ENST00000588032 ITGBL1O95965 494 aaPredicted RBP12.55□□□□□ -0.4
TPM4-207ENST00000588032 SLC5A1P13866 664 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 FGFR2P21802 821 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 GTF2IP78347 998 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
TPM4-207ENST00000588032 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 TDRD7Q8NHU6 1098 aaKnown RBP12.55□□□□□ -0.4
TPM4-207ENST00000588032 LPIN2Q92539 896 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 SIL1Q9H173 461 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 DDX19BQ9UMR2 479 aa12.55□□□□□ -0.4
TPM4-207ENST00000588032 GYG1P46976 350 aa12.54□□□□□ -0.4
TPM4-207ENST00000588032 HIRAP54198 1017 aaPredicted RBP12.54□□□□□ -0.4
TPM4-207ENST00000588032 MAP1SQ66K74 1059 aaPredicted RBP12.54□□□□□ -0.4
TPM4-207ENST00000588032 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
TPM4-207ENST00000588032 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
TPM4-207ENST00000588032 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
TPM4-207ENST00000588032 HDAC9Q9UKV0 1011 aa12.54□□□□□ -0.4
TPM4-207ENST00000588032 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
TPM4-207ENST00000588032 AKAP2Q9Y2D5 859 aa12.54□□□□□ -0.4
TPM4-207ENST00000588032 PNMA6EA0A0J9YXQ4 647 aa12.53□□□□□ -0.4
TPM4-207ENST00000588032 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
TPM4-207ENST00000588032 G3BP1Q13283 466 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■■□□□ 11.9
TPM4-207ENST00000588032 POLA2Q14181 598 aa12.53□□□□□ -0.4
TPM4-207ENST00000588032 KIF4BQ2VIQ3 1234 aa12.53□□□□□ -0.4
TPM4-207ENST00000588032 TBC1D10BQ4KMP7 808 aaPredicted RBP12.53□□□□□ -0.4
TPM4-207ENST00000588032 CDC37L1Q7L3B6 337 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms