RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 APAF1O14727 1248 aa10□□□□□ -0.81
VMP1-204ENST00000587259 CA12O43570 354 aa10□□□□□ -0.81
VMP1-204ENST00000587259 UFL1O94874 794 aa10□□□□□ -0.81
VMP1-204ENST00000587259 SF3B3Q15393 1217 aaKnown RBP10□□□□□ -0.81
VMP1-204ENST00000587259 WDR63Q8IWG1 891 aa10□□□□□ -0.81
VMP1-204ENST00000587259 DPF2Q92785 391 aa10□□□□□ -0.81
VMP1-204ENST00000587259 DCPSQ96C86 337 aaKnown RBP10□□□□□ -0.81
VMP1-204ENST00000587259 CDCA5Q96FF9 252 aa10□□□□□ -0.81
VMP1-204ENST00000587259 MXD3Q9BW11 206 aa10□□□□□ -0.81
VMP1-204ENST00000587259 RNF186Q9NXI6 227 aa10□□□□□ -0.81
VMP1-204ENST00000587259 RCAN3Q9UKA8 241 aa10□□□□□ -0.81
VMP1-204ENST00000587259 ATMINO43313 823 aaPredicted RBP9.99□□□□□ -0.81
VMP1-204ENST00000587259 RPS8P62241 208 aaKnown RBP9.99□□□□□ -0.81
VMP1-204ENST00000587259 ANGEL2Q5VTE6 544 aaKnown RBP9.99□□□□□ -0.81
VMP1-204ENST00000587259 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
VMP1-204ENST00000587259 C2orf69Q8N8R5 385 aa9.99□□□□□ -0.81
VMP1-204ENST00000587259 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.99□□□□□ -0.81
VMP1-204ENST00000587259 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
VMP1-204ENST00000587259 MYD88Q99836 296 aa9.99□□□□□ -0.81
VMP1-204ENST00000587259 TRPC6Q9Y210 931 aa9.99□□□□□ -0.81
VMP1-204ENST00000587259 SLC10A3P09131 477 aa9.98□□□□□ -0.81
VMP1-204ENST00000587259 VIL1P09327 827 aaKnown RBP9.98□□□□□ -0.81
VMP1-204ENST00000587259 CALD1Q05682 793 aaKnown RBP9.98□□□□□ -0.81
VMP1-204ENST00000587259 LMOD3Q0VAK6 560 aa9.98□□□□□ -0.81
VMP1-204ENST00000587259 MKRN3Q13064 507 aaKnown RBP9.98□□□□□ -0.81
VMP1-204ENST00000587259 SCARF1Q14162 830 aa9.98□□□□□ -0.81
VMP1-204ENST00000587259 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
VMP1-204ENST00000587259 BABAM1Q9NWV8 329 aa9.98□□□□□ -0.81
VMP1-204ENST00000587259 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
VMP1-204ENST00000587259 G3V3G9 751 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 SLFN5Q08AF3 891 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 TMC4Q7Z404 712 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 RASAL3Q86YV0 1011 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 SULF1Q8IWU6 871 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 EYA3Q99504 573 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 ZC3H12CQ9C0D7 883 aaKnown RBP9.97□□□□□ -0.81
VMP1-204ENST00000587259 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
VMP1-204ENST00000587259 DBF4Q9UBU7 674 aaPredicted RBP9.97□□□□□ -0.81
VMP1-204ENST00000587259 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
VMP1-204ENST00000587259 IL16Q14005 1332 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 CACNA1FO60840 1977 aa9.97□□□□□ -0.81
VMP1-204ENST00000587259 UBE2Q2LH0YL09 131 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 TBC1D8O95759 1140 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 CT47B1P0C2W7 299 aaPredicted RBP9.96□□□□□ -0.82
VMP1-204ENST00000587259 RPS12P25398 132 aaKnown RBP9.96□□□□□ -0.82
VMP1-204ENST00000587259 ASTLQ6HA08 431 aaPredicted RBP9.96□□□□□ -0.82
VMP1-204ENST00000587259 WWC1Q8IX03 1113 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 ZBTB38Q8NAP3 1195 aaPredicted RBP9.96□□□□□ -0.82
VMP1-204ENST00000587259 HYPKQ9NX55 129 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 GGA1Q9UJY5 639 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 FZD1Q9UP38 647 aa9.96□□□□□ -0.82
VMP1-204ENST00000587259 RRP1P56182 461 aaKnown RBP9.95□□□□□ -0.82
VMP1-204ENST00000587259 ZNF280AP59817 542 aaPredicted RBP9.95□□□□□ -0.82
VMP1-204ENST00000587259 PRKG1Q13976 671 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 NBPF9Q3BBW0 867 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 RSBN1LQ6PCB5 846 aaPredicted RBP9.95□□□□□ -0.82
VMP1-204ENST00000587259 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
VMP1-204ENST00000587259 C8orf58Q8NAV2 365 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 CCDC102AQ96A19 550 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 MYOZ2Q9NPC6 264 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 PPP4R2Q9NY27 417 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 PODXL2Q9NZ53 605 aa9.95□□□□□ -0.82
VMP1-204ENST00000587259 KLRK1P26718 216 aa9.94□□□□□ -0.82
VMP1-204ENST00000587259 ATN1P54259 1190 aaPredicted RBP9.94□□□□□ -0.82
VMP1-204ENST00000587259 TXNRD3Q86VQ6 643 aa9.94□□□□□ -0.82
VMP1-204ENST00000587259 TSPYL6Q8N831 410 aa9.94□□□□□ -0.82
VMP1-204ENST00000587259 GMLQ99445 158 aa9.94□□□□□ -0.82
VMP1-204ENST00000587259 R3HDMLQ9H3Y0 253 aa9.94□□□□□ -0.82
VMP1-204ENST00000587259 SAGE1Q9NXZ1 904 aa9.94□□□□□ -0.82
VMP1-204ENST00000587259 PDE8AO60658 829 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 SASH1O94885 1247 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 HOXB7P09629 217 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 USP17L8P0C7I0 530 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 ZNF853P0CG23 659 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 VASPP50552 380 aaPredicted RBP9.93□□□□□ -0.82
VMP1-204ENST00000587259 TRIM28Q13263 835 aaKnown RBP9.93□□□□□ -0.82
VMP1-204ENST00000587259 CCDC152Q4G0S7 254 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 CTU1Q7Z7A3 348 aaKnown RBP9.93□□□□□ -0.82
VMP1-204ENST00000587259 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 PLSCR2Q9NRY7 297 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 HPS5Q9UPZ3 1129 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 PDE4DIPQ5VU43 2346 aa9.93□□□□□ -0.82
VMP1-204ENST00000587259 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 PCCAP05165 728 aaPredicted RBP9.92□□□□□ -0.82
VMP1-204ENST00000587259 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
VMP1-204ENST00000587259 CWF19L2Q2TBE0 894 aaKnown RBP9.92□□□□□ -0.82
VMP1-204ENST00000587259 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 AGBL3Q8NEM8 1001 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 ZNF296Q8WUU4 475 aaPredicted RBP9.92□□□□□ -0.82
VMP1-204ENST00000587259 GREM2Q9H772 168 aa9.92□□□□□ -0.82
VMP1-204ENST00000587259 BMP2KQ9NSY1 1161 aaPredicted RBP9.92□□□□□ -0.82
VMP1-204ENST00000587259 CWC25Q9NXE8 425 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 280 ms