RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 PA2G4Q9UQ80 394 aaKnown RBP8.14□□□□□ -1.11
NPC1-206ENST00000587223 SUPT16HQ9Y5B9 1047 aaKnown RBP8.14□□□□□ -1.11
NPC1-206ENST00000587223 SPEF2Q9C093 1822 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 ZNF541Q9H0D2 1346 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 LRRC37AA6NMS7 1700 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 PNMA6EA0A0J9YXQ4 647 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 SNAP23O00161 211 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 RAD17O75943 681 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 CIAO1O76071 339 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 PDE8BO95263 885 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 IL15P40933 162 aaPredicted RBP8.13□□□□□ -1.11
NPC1-206ENST00000587223 CXCL9Q07325 125 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 ATG9AQ7Z3C6 839 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 PODNQ7Z5L7 613 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 GPC2Q8N158 579 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 COA1Q9GZY4 146 aa8.13□□□□□ -1.11
NPC1-206ENST00000587223 MED23Q9ULK4 1368 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 YDJCA8MPS7 323 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 SURF6O75683 361 aaKnown RBP8.12□□□□□ -1.11
NPC1-206ENST00000587223 VEGFAP15692 232 aaPredicted RBP8.12□□□□□ -1.11
NPC1-206ENST00000587223 KLRK1P26718 216 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 OS9Q13438 667 aaPredicted RBP8.12□□□□□ -1.11
NPC1-206ENST00000587223 CEP85Q6P2H3 762 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 C15orf52Q6ZUT6 534 aaKnown RBP8.12□□□□□ -1.11
NPC1-206ENST00000587223 TXNRD3Q86VQ6 643 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 VPS37DQ86XT2 251 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 RPAP2Q8IXW5 612 aaPredicted RBP8.12□□□□□ -1.11
NPC1-206ENST00000587223 C16orf71Q8IYS4 520 aaPredicted RBP8.12□□□□□ -1.11
NPC1-206ENST00000587223 SSH3Q8TE77 659 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 NMRK2Q9NPI5 230 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 KCNQ5Q9NR82 932 aa8.12□□□□□ -1.11
NPC1-206ENST00000587223 DUOX1Q9NRD9 1551 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 HMMRO75330 724 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 IFIT1P09914 478 aaKnown RBP8.11□□□□□ -1.11
NPC1-206ENST00000587223 SLC5A1P13866 664 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 LMOD1P29536 600 aaPredicted RBP8.11□□□□□ -1.11
NPC1-206ENST00000587223 HIBADHP31937 336 aaKnown RBP8.11□□□□□ -1.11
NPC1-206ENST00000587223 PUM3Q15397 648 aaKnown RBP8.11□□□□□ -1.11
NPC1-206ENST00000587223 CAVIN4Q5BKX8 364 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 ZNF804AQ7Z570 1209 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 VGLL2Q8N8G2 317 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 FBXW7Q969H0 707 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 CRBNQ96SW2 442 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 CD209Q9NNX6 404 aa8.11□□□□□ -1.11
NPC1-206ENST00000587223 GOLGB1Q14789 3259 aaKnown RBP8.11□□□□□ -1.11
NPC1-206ENST00000587223 USP17L3A6NCW0 530 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 USP17L4A6NCW7 530 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 POTECB2RU33 542 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 PSMD14O00487 310 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 VIL1P09327 827 aaKnown RBP8.1□□□□□ -1.11
NPC1-206ENST00000587223 GYG1P46976 350 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 PLCB2Q00722 1185 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 TFCP2Q12800 502 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 ATP2B3Q16720 1220 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 TTLL5Q6EMB2 1281 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 USP17L1Q7RTZ2 530 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 LPIN2Q92539 896 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 L3MBTL3Q96JM7 780 aaPredicted RBP8.1□□□□□ -1.11
NPC1-206ENST00000587223 FAM84BQ96KN1 310 aaPredicted RBP8.1□□□□□ -1.11
NPC1-206ENST00000587223 NEUROD6Q96NK8 337 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 HACL1Q9UJ83 578 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 AKAP2Q9Y2D5 859 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 NOP58Q9Y2X3 529 aaKnown RBP8.1□□□□□ -1.11
NPC1-206ENST00000587223 COL4A5P29400 1685 aa8.1□□□□□ -1.11
NPC1-206ENST00000587223 LTBP1Q14766 1721 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 TIAM2Q8IVF5 1701 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 H7C1D1 291 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 KIF3CO14782 793 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 FRAT2O75474 233 aaPredicted RBP8.09□□□□□ -1.11
NPC1-206ENST00000587223 SASH1O94885 1247 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 IL1R1P14778 569 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 FGFR2P21802 821 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 RPS12P25398 132 aaKnown RBP8.09□□□□□ -1.11
NPC1-206ENST00000587223 EPHX2P34913 555 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 EPS15P42566 896 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 GMPSP49915 693 aaPredicted RBP8.09□□□□□ -1.11
NPC1-206ENST00000587223 BCAMP50895 628 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 TIMM10P62072 90 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 GTF2IP78347 998 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 HSP90AB4PQ58FF6 505 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 STRIP1Q5VSL9 837 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 RSBN1LQ6PCB5 846 aaPredicted RBP8.09□□□□□ -1.11
NPC1-206ENST00000587223 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 DPF2Q92785 391 aa8.09□□□□□ -1.11
NPC1-206ENST00000587223 CNOT7Q9UIV1 285 aaKnown RBP8.09□□□□□ -1.11
NPC1-206ENST00000587223 IRS2Q9Y4H2 1338 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 A0A1B0GUL7 405 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 TOMM70O94826 608 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 SCNN1DP51172 638 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 EAPPQ56P03 285 aaPredicted RBP8.08□□□□□ -1.12
NPC1-206ENST00000587223 GORABQ5T7V8 394 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 PNMA8AQ86V59 439 aaPredicted RBP8.08□□□□□ -1.12
NPC1-206ENST00000587223 ERC1Q8IUD2 1116 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 SIRT2Q8IXJ6 389 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 AGBL3Q8NEM8 1001 aa8.08□□□□□ -1.12
NPC1-206ENST00000587223 TDRD7Q8NHU6 1098 aaKnown RBP8.08□□□□□ -1.12
NPC1-206ENST00000587223 TAF1DQ9H5J8 278 aaPredicted RBP8.08□□□□□ -1.12
NPC1-206ENST00000587223 GNL3LQ9NVN8 582 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms