RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FBXW7Q969H0 707 aa22.3■■□□□ 1.16
TPM4-206ENST00000587201 KAZALD1Q96I82 304 aa22.3■■□□□ 1.16
TPM4-206ENST00000587201 KLRK1P26718 216 aa22.29■■□□□ 1.16
TPM4-206ENST00000587201 KIF4BQ2VIQ3 1234 aa22.29■■□□□ 1.16
TPM4-206ENST00000587201 BICC1Q9H694 974 aaKnown RBP22.29■■□□□ 1.16
TPM4-206ENST00000587201 SNAP23O00161 211 aa22.28■■□□□ 1.16
TPM4-206ENST00000587201 PLIN1O60240 522 aa22.28■■□□□ 1.16
TPM4-206ENST00000587201 DEFB115Q30KQ5 88 aa22.28■■□□□ 1.16
TPM4-206ENST00000587201 NOB1Q9ULX3 412 aaKnown RBP22.28■■□□□ 1.16
TPM4-206ENST00000587201 RASSF10A6NK89 507 aa22.27■■□□□ 1.16
TPM4-206ENST00000587201 ZNF609O15014 1411 aa22.27■■□□□ 1.16
TPM4-206ENST00000587201 CST9Q5W186 159 aa22.27■■□□□ 1.16
TPM4-206ENST00000587201 PSME4Q14997 1843 aa22.27■■□□□ 1.15
TPM4-206ENST00000587201 CELF2O95319 508 aaKnown RBP22.26■■□□□ 1.15
TPM4-206ENST00000587201 USP17L8P0C7I0 530 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 VEGFBP49765 207 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 ZNF280AP59817 542 aaPredicted RBP22.26■■□□□ 1.15
TPM4-206ENST00000587201 RABL6Q3YEC7 729 aaPredicted RBP22.26■■□□□ 1.15
TPM4-206ENST00000587201 STRIP1Q5VSL9 837 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 USP48Q86UV5 1035 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 DCPSQ96C86 337 aaKnown RBP22.26■■□□□ 1.15
TPM4-206ENST00000587201 GMLQ99445 158 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 USP44Q9H0E7 712 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 ZNF408Q9H9D4 720 aa22.26■■□□□ 1.15
TPM4-206ENST00000587201 HSPA1AP0DMV8 641 aaKnown RBP22.25■■□□□ 1.15
TPM4-206ENST00000587201 HSPA1BP0DMV9 641 aaKnown RBP22.25■■□□□ 1.15
TPM4-206ENST00000587201 RARSP54136 660 aaKnown RBP22.25■■□□□ 1.15
TPM4-206ENST00000587201 BRPF1P55201 1214 aaPredicted RBP22.25■■□□□ 1.15
TPM4-206ENST00000587201 HNRNPUQ00839 825 aaKnown RBP eCLIP22.25■■□□□ 1.15
TPM4-206ENST00000587201 DACT2Q5SW24 774 aa22.25■■□□□ 1.15
TPM4-206ENST00000587201 MXD3Q9BW11 206 aa22.25■■□□□ 1.15
TPM4-206ENST00000587201 API5Q9BZZ5 524 aaKnown RBP22.25■■□□□ 1.15
TPM4-206ENST00000587201 CD209Q9NNX6 404 aa22.25■■□□□ 1.15
TPM4-206ENST00000587201 TRPM7Q96QT4 1865 aa22.24■■□□□ 1.15
TPM4-206ENST00000587201 TTLL5Q6EMB2 1281 aa22.24■■□□□ 1.15
TPM4-206ENST00000587201 KRT26Q7Z3Y9 468 aa22.24■■□□□ 1.15
TPM4-206ENST00000587201 ANKRD44Q8N8A2 993 aa22.24■■□□□ 1.15
TPM4-206ENST00000587201 MYOZ2Q9NPC6 264 aa22.24■■□□□ 1.15
TPM4-206ENST00000587201 MYO3BQ8WXR4 1341 aa22.24■■□□□ 1.15
TPM4-206ENST00000587201 GTF2IP78347 998 aa22.23■■□□□ 1.15
TPM4-206ENST00000587201 C15orf52Q6ZUT6 534 aaKnown RBP22.23■■□□□ 1.15
TPM4-206ENST00000587201 PAXIP1Q6ZW49 1069 aaPredicted RBP22.23■■□□□ 1.15
TPM4-206ENST00000587201 PUS3Q9BZE2 481 aaKnown RBP22.23■■□□□ 1.15
TPM4-206ENST00000587201 GGA3Q9NZ52 723 aa22.23■■□□□ 1.15
TPM4-206ENST00000587201 TLL2Q9Y6L7 1015 aa22.23■■□□□ 1.15
TPM4-206ENST00000587201 IRS2Q9Y4H2 1338 aa22.23■■□□□ 1.15
TPM4-206ENST00000587201 SCARF1Q14162 830 aa22.22■■□□□ 1.15
TPM4-206ENST00000587201 ZNF804AQ7Z570 1209 aa22.22■■□□□ 1.15
TPM4-206ENST00000587201 OGFOD1Q8N543 542 aa22.22■■□□□ 1.15
TPM4-206ENST00000587201 A0A1B0GUL6 1792 aa22.22■■□□□ 1.15
TPM4-206ENST00000587201 ADM5C9JUS6 153 aa22.21■■□□□ 1.15
TPM4-206ENST00000587201 DLK2Q6UY11 383 aa22.21■■□□□ 1.15
TPM4-206ENST00000587201 SULF1Q8IWU6 871 aa22.21■■□□□ 1.15
TPM4-206ENST00000587201 ASTN2O75129 1339 aaPredicted RBP22.21■■□□□ 1.15
TPM4-206ENST00000587201 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
TPM4-206ENST00000587201 WDR33Q9C0J8 1336 aaKnown RBP22.21■■□□□ 1.15
TPM4-206ENST00000587201 PCNTO95613 3336 aa22.2■■□□□ 1.14
TPM4-206ENST00000587201 ANGEL2Q5VTE6 544 aaKnown RBP22.2■■□□□ 1.14
TPM4-206ENST00000587201 RIPOR2Q9Y4F9 1068 aa22.2■■□□□ 1.14
TPM4-206ENST00000587201 MROH5Q6ZUA9 1318 aa22.2■■□□□ 1.14
TPM4-206ENST00000587201 UBTFL1P0CB47 393 aaPredicted RBP22.19■■□□□ 1.14
TPM4-206ENST00000587201 GRM1Q13255 1194 aa22.19■■□□□ 1.14
TPM4-206ENST00000587201 UBE4AQ14139 1066 aa22.19■■□□□ 1.14
TPM4-206ENST00000587201 LRRC24Q50LG9 513 aa22.19■■□□□ 1.14
TPM4-206ENST00000587201 SAPCD2Q86UD0 394 aa22.19■■□□□ 1.14
TPM4-206ENST00000587201 IL1R1P14778 569 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 ECE1P42892 770 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 CYP4F22Q6NT55 531 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 KIAA0825Q8IV33 1275 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 KLHDC4Q8TBB5 520 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 CAPNS2Q96L46 248 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 HDAC9Q9UKV0 1011 aa22.18■■□□□ 1.14
TPM4-206ENST00000587201 MMP14P50281 582 aa22.17■■□□□ 1.14
TPM4-206ENST00000587201 METTL24Q5JXM2 366 aa22.17■■□□□ 1.14
TPM4-206ENST00000587201 ZNF646O15015 1829 aaPredicted RBP22.17■■□□□ 1.14
TPM4-206ENST00000587201 POLR2AP24928 1970 aaKnown RBP22.16■■□□□ 1.14
TPM4-206ENST00000587201 NBPF9Q3BBW0 867 aa22.16■■□□□ 1.14
TPM4-206ENST00000587201 IPO8O15397 1037 aaKnown RBP22.15■■□□□ 1.14
TPM4-206ENST00000587201 BCAR3O75815 825 aa22.15■■□□□ 1.14
TPM4-206ENST00000587201 GYG1P46976 350 aa22.15■■□□□ 1.14
TPM4-206ENST00000587201 HDAC5Q9UQL6 1122 aa22.15■■□□□ 1.14
TPM4-206ENST00000587201 PITPNM2Q9BZ72 1349 aa22.14■■□□□ 1.14
TPM4-206ENST00000587201 WNT10BO00744 389 aa22.14■■□□□ 1.13
TPM4-206ENST00000587201 HIBADHP31937 336 aaKnown RBP22.14■■□□□ 1.13
TPM4-206ENST00000587201 C2orf69Q8N8R5 385 aa22.14■■□□□ 1.13
TPM4-206ENST00000587201 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.13
TPM4-206ENST00000587201 AIDAQ96BJ3 306 aa22.14■■□□□ 1.13
TPM4-206ENST00000587201 HHIPL1Q96JK4 782 aa22.14■■□□□ 1.13
TPM4-206ENST00000587201 GBA2Q9HCG7 927 aaPredicted RBP22.14■■□□□ 1.13
TPM4-206ENST00000587201 JAG2Q9Y219 1238 aa22.14■■□□□ 1.13
TPM4-206ENST00000587201 SASH1O94885 1247 aa22.13■■□□□ 1.13
TPM4-206ENST00000587201 PDE8BO95263 885 aa22.13■■□□□ 1.13
TPM4-206ENST00000587201 RFX5P48382 616 aaPredicted RBP22.13■■□□□ 1.13
TPM4-206ENST00000587201 HUNKP57058 714 aa22.13■■□□□ 1.13
TPM4-206ENST00000587201 CERS5Q8N5B7 392 aa22.13■■□□□ 1.13
TPM4-206ENST00000587201 CDCA5Q96FF9 252 aa22.13■■□□□ 1.13
TPM4-206ENST00000587201 FAM84BQ96KN1 310 aaPredicted RBP22.13■■□□□ 1.13
TPM4-206ENST00000587201 LRRFIP2Q9Y608 721 aaKnown RBP22.13■■□□□ 1.13
TPM4-206ENST00000587201 F8W031 263 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms