RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 USP17L4A6NCW7 530 aa17.48■□□□□ 0.39
TPM4-205ENST00000586833 OS9Q13438 667 aaPredicted RBP17.48■□□□□ 0.39
TPM4-205ENST00000586833 USP17L1Q7RTZ2 530 aa17.48■□□□□ 0.39
TPM4-205ENST00000586833 RBM46Q8TBY0 533 aaKnown RBP17.48■□□□□ 0.39
TPM4-205ENST00000586833 LPIN2Q92539 896 aa17.48■□□□□ 0.39
TPM4-205ENST00000586833 MYO3BQ8WXR4 1341 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 YDJCA8MPS7 323 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 H7C1D1 291 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 PSMD14O00487 310 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 HIBADHP31937 336 aaKnown RBP17.47■□□□□ 0.39
TPM4-205ENST00000586833 EPHX2P34913 555 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 MMP14P50281 582 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 RPAP2Q8IXW5 612 aaPredicted RBP17.47■□□□□ 0.39
TPM4-205ENST00000586833 DPF2Q92785 391 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 C1orf115Q9H7X2 142 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 COL4A1P02462 1669 aa17.47■□□□□ 0.39
TPM4-205ENST00000586833 FRAT2O75474 233 aaPredicted RBP17.46■□□□□ 0.39
TPM4-205ENST00000586833 GMPSP49915 693 aaPredicted RBP17.46■□□□□ 0.39
TPM4-205ENST00000586833 HSP90AB4PQ58FF6 505 aa17.46■□□□□ 0.39
TPM4-205ENST00000586833 STRIP1Q5VSL9 837 aa17.46■□□□□ 0.39
TPM4-205ENST00000586833 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
TPM4-205ENST00000586833 AGBL3Q8NEM8 1001 aa17.46■□□□□ 0.39
TPM4-205ENST00000586833 TAF1DQ9H5J8 278 aaPredicted RBP17.46■□□□□ 0.39
TPM4-205ENST00000586833 CD209Q9NNX6 404 aa17.46■□□□□ 0.39
TPM4-205ENST00000586833 ADARB2Q9NS39 739 aaKnown RBP17.46■□□□□ 0.39
TPM4-205ENST00000586833 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
TPM4-205ENST00000586833 VIL1P09327 827 aaKnown RBP17.45■□□□□ 0.38
TPM4-205ENST00000586833 FSTL1Q12841 308 aa17.45■□□□□ 0.38
TPM4-205ENST00000586833 ATP2B3Q16720 1220 aa17.45■□□□□ 0.38
TPM4-205ENST00000586833 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
TPM4-205ENST00000586833 USP50Q70EL3 339 aaPredicted RBP17.45■□□□□ 0.38
TPM4-205ENST00000586833 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
TPM4-205ENST00000586833 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
TPM4-205ENST00000586833 GPRC5DQ9NZD1 345 aa17.45■□□□□ 0.38
TPM4-205ENST00000586833 SBF1O95248 1867 aa17.45■□□□□ 0.38
TPM4-205ENST00000586833 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 POLA2Q14181 598 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 EAPPQ56P03 285 aaPredicted RBP17.44■□□□□ 0.38
TPM4-205ENST00000586833 TTLL5Q6EMB2 1281 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 LDHDQ86WU2 507 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 OGFOD1Q8N543 542 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 VGLL2Q8N8G2 317 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 CLEC11AQ9Y240 323 aa17.44■□□□□ 0.38
TPM4-205ENST00000586833 COL4A5P29400 1685 aa17.43■□□□□ 0.38
TPM4-205ENST00000586833 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
TPM4-205ENST00000586833 IL1R1P14778 569 aa17.43■□□□□ 0.38
TPM4-205ENST00000586833 SCNN1DP51172 638 aa17.43■□□□□ 0.38
TPM4-205ENST00000586833 C1QTNF8P60827 252 aa17.43■□□□□ 0.38
TPM4-205ENST00000586833 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
TPM4-205ENST00000586833 CNOT7Q9UIV1 285 aaKnown RBP17.43■□□□□ 0.38
TPM4-205ENST00000586833 HDAC9Q9UKV0 1011 aa17.43■□□□□ 0.38
TPM4-205ENST00000586833 LTBP1Q14766 1721 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 WDR90Q96KV7 1748 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 POTECB2RU33 542 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 SNAP23O00161 211 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 KLRK1P26718 216 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 GTF2IP78347 998 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
TPM4-205ENST00000586833 TAF1P21675 1872 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
TPM4-205ENST00000586833 WTIPA6NIX2 430 aaPredicted RBP17.41■□□□□ 0.38
TPM4-205ENST00000586833 SASH1O94885 1247 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 FGFR2P21802 821 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 GYG1P46976 350 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 FKBP1AP62942 108 aaKnown RBP17.41■□□□□ 0.38
TPM4-205ENST00000586833 GORABQ5T7V8 394 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 CHADLQ6NUI6 762 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 MICALL2Q8IY33 904 aa17.41■□□□□ 0.38
TPM4-205ENST00000586833 FAM84BQ96KN1 310 aaPredicted RBP17.41■□□□□ 0.38
TPM4-205ENST00000586833 ZBTB12Q9Y330 459 aaPredicted RBP17.41■□□□□ 0.38
TPM4-205ENST00000586833 USP17L8P0C7I0 530 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 EPS15P42566 896 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 TFCP2Q12800 502 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 AAMPQ13685 434 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 TDRD7Q8NHU6 1098 aaKnown RBP17.4■□□□□ 0.38
TPM4-205ENST00000586833 TBC1D22AQ8WUA7 517 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 KCNQ5Q9NR82 932 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
TPM4-205ENST00000586833 IRS2Q9Y4H2 1338 aa17.4■□□□□ 0.38
TPM4-205ENST00000586833 ZNF609O15014 1411 aa17.39■□□□□ 0.38
TPM4-205ENST00000586833 DACT2Q5SW24 774 aa17.39■□□□□ 0.37
TPM4-205ENST00000586833 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
TPM4-205ENST00000586833 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
TPM4-205ENST00000586833 GPR108Q9NPR9 543 aa17.39■□□□□ 0.37
TPM4-205ENST00000586833 SEMA3EO15041 775 aa17.38■□□□□ 0.37
TPM4-205ENST00000586833 FAM205AQ6ZU69 1335 aa17.38■□□□□ 0.37
TPM4-205ENST00000586833 A0A1B0GUL7 405 aa17.37■□□□□ 0.37
TPM4-205ENST00000586833 RAB11FIP3O75154 756 aa17.37■□□□□ 0.37
TPM4-205ENST00000586833 BCAMP50895 628 aa17.37■□□□□ 0.37
TPM4-205ENST00000586833 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
TPM4-205ENST00000586833 ZNF280AP59817 542 aaPredicted RBP17.36■□□□□ 0.37
TPM4-205ENST00000586833 CHAF1AQ13111 956 aaPredicted RBP17.36■□□□□ 0.37
TPM4-205ENST00000586833 KIF4BQ2VIQ3 1234 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms