RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 WDR64B1ANS9 1081 aa8.06□□□□□ -1.12
ZNF540-204ENST00000586792 FSCN2O14926 492 aa8.06□□□□□ -1.12
ZNF540-204ENST00000586792 CEP135Q66GS9 1140 aa8.06□□□□□ -1.12
ZNF540-204ENST00000586792 ANKRD34AQ69YU3 496 aa8.06□□□□□ -1.12
ZNF540-204ENST00000586792 URB2Q14146 1524 aaKnown RBP8.06□□□□□ -1.12
ZNF540-204ENST00000586792 LGR5O75473 907 aa8.05□□□□□ -1.12
ZNF540-204ENST00000586792 C8AP07357 584 aa8.05□□□□□ -1.12
ZNF540-204ENST00000586792 HYAL2Q12891 473 aa8.05□□□□□ -1.12
ZNF540-204ENST00000586792 PTK7Q13308 1070 aa8.05□□□□□ -1.12
ZNF540-204ENST00000586792 LACRTQ9GZZ8 138 aa8.05□□□□□ -1.12
ZNF540-204ENST00000586792 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
ZNF540-204ENST00000586792 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
ZNF540-204ENST00000586792 WEE1P30291 646 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 CPSF6Q16630 551 aaKnown RBP eCLIP8.04□□□□□ -1.12
ZNF540-204ENST00000586792 TXNDC11Q6PKC3 985 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 ANKMY2Q8IV38 441 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 OR13H1Q8NG92 308 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 FBXL18Q96ME1 805 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 LEMD3Q9Y2U8 911 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 MAFBQ9Y5Q3 323 aaPredicted RBP8.04□□□□□ -1.12
ZNF540-204ENST00000586792 DNMBPQ6XZF7 1577 aa8.04□□□□□ -1.12
ZNF540-204ENST00000586792 JUNBP17275 347 aaPredicted RBP8.03□□□□□ -1.12
ZNF540-204ENST00000586792 CARD10Q9BWT7 1032 aa8.03□□□□□ -1.12
ZNF540-204ENST00000586792 RNF208Q9H0X6 261 aa8.03□□□□□ -1.12
ZNF540-204ENST00000586792 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
ZNF540-204ENST00000586792 FAM196BA6NMK8 535 aa8.02□□□□□ -1.13
ZNF540-204ENST00000586792 TM4SF5O14894 197 aa8.02□□□□□ -1.13
ZNF540-204ENST00000586792 HOXA10P31260 410 aaPredicted RBP8.02□□□□□ -1.13
ZNF540-204ENST00000586792 CRTC2Q53ET0 693 aaPredicted RBP8.02□□□□□ -1.13
ZNF540-204ENST00000586792 FAM13BQ9NYF5 915 aa8.02□□□□□ -1.13
ZNF540-204ENST00000586792 LRFN2Q9ULH4 789 aa8.02□□□□□ -1.13
ZNF540-204ENST00000586792 TOPBP1Q92547 1522 aa8.02□□□□□ -1.13
ZNF540-204ENST00000586792 UBTFP17480 764 aaKnown RBP8.01□□□□□ -1.13
ZNF540-204ENST00000586792 CDC25BP30305 580 aa8.01□□□□□ -1.13
ZNF540-204ENST00000586792 CBLL1Q75N03 491 aa8.01□□□□□ -1.13
ZNF540-204ENST00000586792 MFSD14AQ96MC6 490 aa8.01□□□□□ -1.13
ZNF540-204ENST00000586792 CCDC39Q9UFE4 941 aa8.01□□□□□ -1.13
ZNF540-204ENST00000586792 IFT140Q96RY7 1462 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L15C9J2P7 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L10C9JJH3 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L13C9JLJ4 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L12C9JPN9 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L11C9JVI0 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L21D6R901 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L18D6R9N7 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L22D6RA61 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L17D6RBQ6 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L19D6RCP7 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L20D6RJB6 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 FOSL1P15407 271 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 ATP11AP98196 1134 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 USP17L24Q0WX57 530 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 FDX2Q6P4F2 183 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 FOXD4L4Q8WXT5 416 aaPredicted RBP8□□□□□ -1.13
ZNF540-204ENST00000586792 WNT8BQ93098 351 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 OSBPL1AQ9BXW6 950 aa8□□□□□ -1.13
ZNF540-204ENST00000586792 GAS2O43903 313 aaKnown RBP7.99□□□□□ -1.13
ZNF540-204ENST00000586792 PRNPP04156 253 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 PTPRAP18433 802 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 SCNN1AP37088 669 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 PREPP48147 710 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 CABP4P57796 275 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 TTC39BQ5VTQ0 682 aaPredicted RBP7.99□□□□□ -1.13
ZNF540-204ENST00000586792 VSIG10LQ86VR7 867 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 TP53INP2Q8IXH6 220 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 UBASH3BQ8TF42 649 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
ZNF540-204ENST00000586792 FNDC3AQ9Y2H6 1198 aaKnown RBP7.99□□□□□ -1.13
ZNF540-204ENST00000586792 UBAP1LF5GYI3 381 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 DDX3YO15523 660 aaKnown RBP7.98□□□□□ -1.13
ZNF540-204ENST00000586792 ADAM11O75078 769 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 BRD2P25440 801 aaKnown RBP7.98□□□□□ -1.13
ZNF540-204ENST00000586792 FLIIQ13045 1269 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 MSMPQ1L6U9 139 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 PIK3R5Q8WYR1 880 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 KRTAP4-2Q9BYR5 136 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 OSGEPQ9NPF4 335 aa7.98□□□□□ -1.13
ZNF540-204ENST00000586792 ITGB5P18084 799 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 EPHA1P21709 976 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 MAP4P27816 1152 aaKnown RBP7.97□□□□□ -1.13
ZNF540-204ENST00000586792 PIP4K2BP78356 416 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
ZNF540-204ENST00000586792 METTL22Q9BUU2 404 aaPredicted RBP7.97□□□□□ -1.13
ZNF540-204ENST00000586792 RUSC1Q9BVN2 902 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 PBX4Q9BYU1 374 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 ADAM19Q9H013 955 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 RASSF4Q9H2L5 321 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 VRTNQ9H8Y1 702 aa7.97□□□□□ -1.13
ZNF540-204ENST00000586792 TRIP4Q15650 581 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-204ENST00000586792 COX20Q5RI15 118 aa7.96□□□□□ -1.14
ZNF540-204ENST00000586792 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-204ENST00000586792 AGBL5Q8NDL9 886 aa7.96□□□□□ -1.14
ZNF540-204ENST00000586792 EIF4G3O43432 1585 aaKnown RBP7.96□□□□□ -1.14
ZNF540-204ENST00000586792 POLA1P09884 1462 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-204ENST00000586792 MEGF11A6BM72 1044 aa7.95□□□□□ -1.14
ZNF540-204ENST00000586792 H3BRJ5 948 aa7.95□□□□□ -1.14
ZNF540-204ENST00000586792 KIF4AO95239 1232 aa7.95□□□□□ -1.14
ZNF540-204ENST00000586792 F13BP05160 661 aa7.95□□□□□ -1.14
ZNF540-204ENST00000586792 RXRBP28702 533 aa7.95□□□□□ -1.14
ZNF540-204ENST00000586792 FBXL6Q8N531 539 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms