RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 BOLA2Q9H3K6 86 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 GPR108Q9NPR9 543 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 MYH7P12883 1935 aa12.38□□□□□ -0.43
APOC1-201ENST00000586638 NPHP1O15259 732 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
APOC1-201ENST00000586638 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
APOC1-201ENST00000586638 PRR5LQ6MZQ0 368 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 IL25Q9H293 177 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 RIPOR2Q9Y4F9 1068 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 ANKRD31Q8N7Z5 1873 aa12.37□□□□□ -0.43
APOC1-201ENST00000586638 SBF1O95248 1867 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 ATP5JP18859 108 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 TIMM10P62072 90 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 ATP2B3Q16720 1220 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 EDC3Q96F86 508 aaKnown RBP12.36□□□□□ -0.43
APOC1-201ENST00000586638 DNAJC2Q99543 621 aaKnown RBP12.36□□□□□ -0.43
APOC1-201ENST00000586638 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 NRXN2Q9P2S2 1712 aa12.36□□□□□ -0.43
APOC1-201ENST00000586638 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
APOC1-201ENST00000586638 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
APOC1-201ENST00000586638 RBM25P49756 843 aaKnown RBP12.35□□□□□ -0.43
APOC1-201ENST00000586638 STYK1Q6J9G0 422 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 VGLL2Q8N8G2 317 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 CNBD1Q8NA66 436 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 MKRN1Q9UHC7 482 aaKnown RBP12.35□□□□□ -0.43
APOC1-201ENST00000586638 MYO5AQ9Y4I1 1855 aaKnown RBP12.35□□□□□ -0.43
APOC1-201ENST00000586638 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
APOC1-201ENST00000586638 REC8O95072 547 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 SRGNP10124 158 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 ST5P78524 1137 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 SF3B3Q15393 1217 aaKnown RBP12.34□□□□□ -0.43
APOC1-201ENST00000586638 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
APOC1-201ENST00000586638 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 FSD1Q9BTV5 496 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 DIAPH3Q9NSV4 1193 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 MYH13Q9UKX3 1938 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 MROH5Q6ZUA9 1318 aa12.34□□□□□ -0.43
APOC1-201ENST00000586638 COL11A2P13942 1736 aaPredicted RBP12.34□□□□□ -0.43
APOC1-201ENST00000586638 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
APOC1-201ENST00000586638 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 TTC39AQ5SRH9 613 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
APOC1-201ENST00000586638 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 CDC5LQ99459 802 aaKnown RBP12.33□□□□□ -0.44
APOC1-201ENST00000586638 HAUS7Q99871 368 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 USP26Q9BXU7 913 aa12.33□□□□□ -0.44
APOC1-201ENST00000586638 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 IQCA1LA6NCM1 817 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 SGSM2O43147 1006 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 IFIT1P09914 478 aaKnown RBP12.32□□□□□ -0.44
APOC1-201ENST00000586638 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 SLC4A3P48751 1232 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 NMIQ13287 307 aaPredicted RBP12.32□□□□□ -0.44
APOC1-201ENST00000586638 GORABQ5T7V8 394 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 DDX46Q7L014 1031 aaKnown RBP12.32□□□□□ -0.44
APOC1-201ENST00000586638 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 CELF1Q92879 486 aaKnown RBP12.32□□□□□ -0.44
APOC1-201ENST00000586638 ANO2Q9NQ90 1003 aa12.32□□□□□ -0.44
APOC1-201ENST00000586638 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 A0A0D9SFI3 127 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 SNAP23O00161 211 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 GOLIM4O00461 696 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 TAF5LO75529 589 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 PDE8BO95263 885 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 FGFR2P21802 821 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 CHRNDQ07001 517 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 PUM3Q15397 648 aaKnown RBP12.31□□□□□ -0.44
APOC1-201ENST00000586638 CWC27Q6UX04 472 aaKnown RBP12.31□□□□□ -0.44
APOC1-201ENST00000586638 C7orf43Q8WVR3 580 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 KIF2CQ99661 725 aa12.31□□□□□ -0.44
APOC1-201ENST00000586638 SLC5A1P13866 664 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 NPR1P16066 1061 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 SCARF1Q14162 830 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 CCDC158Q5M9N0 1113 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 LDHDQ86WU2 507 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.3□□□□□ -0.44
APOC1-201ENST00000586638 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
APOC1-201ENST00000586638 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 PAG1Q9NWQ8 432 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 RAD50Q92878 1312 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 MED23Q9ULK4 1368 aa12.3□□□□□ -0.44
APOC1-201ENST00000586638 HIP1O00291 1037 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms