RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 PHACTR3Q96KR7 559 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 TTC12Q9H892 705 aaPredicted RBP11.7□□□□□ -0.54
ZNF540-203ENST00000586134 SCN7AQ01118 1682 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 AFDNP55196 1824 aaKnown RBP11.7□□□□□ -0.54
ZNF540-203ENST00000586134 STARD3NLO95772 234 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 TNNT1P13805 278 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 NUCKS1Q9H1E3 243 aaKnown RBP11.7□□□□□ -0.54
ZNF540-203ENST00000586134 LAMB4A4D0S4 1761 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 N4BP2Q86UW6 1770 aaPredicted RBP11.7□□□□□ -0.54
ZNF540-203ENST00000586134 SYCE3A1L190 88 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
ZNF540-203ENST00000586134 SLC39A6Q13433 755 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 SETDB1Q15047 1291 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 JAKMIP3Q5VZ66 844 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 ZNF513Q8N8E2 541 aaPredicted RBP11.69□□□□□ -0.54
ZNF540-203ENST00000586134 PXDNLA1KZ92 1463 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 COL15A1P39059 1388 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 BCORQ6W2J9 1755 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 A0A087WZG4 1122 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 C21orf2O43822 256 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 STAG1Q8WVM7 1258 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 LCMT1Q9UIC8 334 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
ZNF540-203ENST00000586134 PTPRCP08575 1304 aa11.68□□□□□ -0.54
ZNF540-203ENST00000586134 NRDCO43847 1150 aa11.68□□□□□ -0.54
ZNF540-203ENST00000586134 YBX3P16989 372 aaKnown RBP eCLIP11.68□□□□□ -0.54
ZNF540-203ENST00000586134 USP8P40818 1118 aa11.68□□□□□ -0.54
ZNF540-203ENST00000586134 GPT2Q8TD30 523 aa11.68□□□□□ -0.54
ZNF540-203ENST00000586134 RTF1Q92541 710 aaKnown RBP11.68□□□□□ -0.54
ZNF540-203ENST00000586134 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
ZNF540-203ENST00000586134 CWC22Q9HCG8 908 aaKnown RBP11.68□□□□□ -0.54
ZNF540-203ENST00000586134 TMEM63CQ9P1W3 806 aa11.68□□□□□ -0.54
ZNF540-203ENST00000586134 RGL2O15211 777 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 COQ9O75208 318 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 TPM1P09493 284 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 TM4SF1P30408 202 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 EIF5P55010 431 aaKnown RBP11.67□□□□□ -0.54
ZNF540-203ENST00000586134 ERCC4Q92889 916 aaPredicted RBP11.67□□□□□ -0.54
ZNF540-203ENST00000586134 ZNF496Q96IT1 587 aaPredicted RBP11.67□□□□□ -0.54
ZNF540-203ENST00000586134 PDZRN3Q9UPQ7 1066 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 KIF2AO00139 706 aaPredicted RBP11.67□□□□□ -0.54
ZNF540-203ENST00000586134 ZPR1O75312 459 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 ADCY5O95622 1261 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 C17orf53Q8N3J3 647 aaPredicted RBP11.67□□□□□ -0.54
ZNF540-203ENST00000586134 NEK11Q8NG66 645 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 MKL1Q969V6 931 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
ZNF540-203ENST00000586134 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
ZNF540-203ENST00000586134 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
ZNF540-203ENST00000586134 IL6STP40189 918 aaPredicted RBP11.66□□□□□ -0.54
ZNF540-203ENST00000586134 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
ZNF540-203ENST00000586134 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
ZNF540-203ENST00000586134 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
ZNF540-203ENST00000586134 SGSM2O43147 1006 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 SMC2O95347 1197 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 ZRSR1Q15695 479 aaKnown RBP11.65□□□□□ -0.54
ZNF540-203ENST00000586134 FBXO38Q6PIJ6 1188 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 FMNL3Q8IVF7 1028 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 RNF214Q8ND24 703 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 ZNF521Q96K83 1311 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
ZNF540-203ENST00000586134 SRP68Q9UHB9 627 aaKnown RBP11.65□□□□□ -0.54
ZNF540-203ENST00000586134 ADCY9O60503 1353 aa11.65□□□□□ -0.54
ZNF540-203ENST00000586134 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 IPO8O15397 1037 aaKnown RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 PRPF40AO75400 957 aaKnown RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 E2F4Q16254 413 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 EXOC4Q96A65 974 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 A1CFQ9NQ94 594 aaKnown RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 RBM27Q9P2N5 1060 aaKnown RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 H2AFXP16104 143 aaPredicted RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 DDR1Q08345 913 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 HDAC1Q13547 482 aaPredicted RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 NFE2L2Q16236 605 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.55
ZNF540-203ENST00000586134 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 FHOD1Q9Y613 1164 aa11.64□□□□□ -0.55
ZNF540-203ENST00000586134 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
ZNF540-203ENST00000586134 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
ZNF540-203ENST00000586134 CORO7P57737 925 aa11.63□□□□□ -0.55
ZNF540-203ENST00000586134 EFCAB13Q8IY85 973 aa11.63□□□□□ -0.55
ZNF540-203ENST00000586134 BABAM1Q9NWV8 329 aa11.63□□□□□ -0.55
ZNF540-203ENST00000586134 PYCARDQ9ULZ3 195 aa11.63□□□□□ -0.55
ZNF540-203ENST00000586134 KDM4AO75164 1064 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 ACTN2P35609 894 aa11.62□□□□□ -0.55
ZNF540-203ENST00000586134 SLFN5Q08AF3 891 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms