RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 NLGN2Q8NFZ4 835 aa27.44■■□□□ 1.98
LAMA3-204ENST00000585600 IFIT1P09914 478 aaKnown RBP27.43■■□□□ 1.98
LAMA3-204ENST00000585600 GSPT1P15170 499 aaKnown RBP27.43■■□□□ 1.98
LAMA3-204ENST00000585600 PIM2Q9P1W9 311 aa27.43■■□□□ 1.98
LAMA3-204ENST00000585600 ZNF219Q9P2Y4 722 aaPredicted RBP27.43■■□□□ 1.98
LAMA3-204ENST00000585600 LEMD3Q9Y2U8 911 aa27.43■■□□□ 1.98
LAMA3-204ENST00000585600 KLRK1P26718 216 aa27.42■■□□□ 1.98
LAMA3-204ENST00000585600 AOX1Q06278 1338 aa27.42■■□□□ 1.98
LAMA3-204ENST00000585600 IRS2Q9Y4H2 1338 aa27.42■■□□□ 1.98
LAMA3-204ENST00000585600 TTC22Q5TAA0 569 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 POLLQ9UGP5 575 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 WWC3Q9ULE0 1092 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 SLX4Q8IY92 1834 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 KCNJ4P48050 445 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 NFKBIBQ15653 356 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 GPATCH3Q96I76 525 aa27.41■■□□□ 1.98
LAMA3-204ENST00000585600 FHDC1Q9C0D6 1143 aaPredicted RBP27.41■■□□□ 1.98
LAMA3-204ENST00000585600 C21orf2O43822 256 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 ATP2B4P23634 1241 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 TXNRD3Q86VQ6 643 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 TBC1D16Q8TBP0 767 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 DLEC1Q9Y238 1755 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 LRRC37AA6NMS7 1700 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 A0A1B0GUL6 1792 aa27.4■■□□□ 1.98
LAMA3-204ENST00000585600 ATP5JP18859 108 aa27.39■■□□□ 1.98
LAMA3-204ENST00000585600 GORABQ5T7V8 394 aa27.39■■□□□ 1.98
LAMA3-204ENST00000585600 CCDC102BQ68D86 513 aa27.39■■□□□ 1.98
LAMA3-204ENST00000585600 MPNDQ8N594 471 aa27.39■■□□□ 1.98
LAMA3-204ENST00000585600 GPR101Q96P66 508 aaPredicted RBP27.39■■□□□ 1.98
LAMA3-204ENST00000585600 GGA1Q9UJY5 639 aa27.39■■□□□ 1.98
LAMA3-204ENST00000585600 GOLGB1Q14789 3259 aaKnown RBP27.39■■□□□ 1.98
LAMA3-204ENST00000585600 SRCAPQ6ZRS2 3230 aa27.39■■□□□ 1.98
LAMA3-204ENST00000585600 GLRX3O76003 335 aaKnown RBP27.39■■□□□ 1.97
LAMA3-204ENST00000585600 UFL1O94874 794 aa27.39■■□□□ 1.97
LAMA3-204ENST00000585600 PHKA1P46020 1223 aa27.39■■□□□ 1.97
LAMA3-204ENST00000585600 BCAMP50895 628 aa27.39■■□□□ 1.97
LAMA3-204ENST00000585600 MFAP1P55081 439 aaKnown RBP27.39■■□□□ 1.97
LAMA3-204ENST00000585600 CCDC158Q5M9N0 1113 aa27.38■■□□□ 1.97
LAMA3-204ENST00000585600 FAM84BQ96KN1 310 aaPredicted RBP27.38■■□□□ 1.97
LAMA3-204ENST00000585600 TMX4Q9H1E5 349 aaPredicted RBP27.38■■□□□ 1.97
LAMA3-204ENST00000585600 BOLA2Q9H3K6 86 aa27.38■■□□□ 1.97
LAMA3-204ENST00000585600 SNED1Q8TER0 1413 aa27.38■■□□□ 1.97
LAMA3-204ENST00000585600 ERC2O15083 957 aa27.37■■□□□ 1.97
LAMA3-204ENST00000585600 GYG1P46976 350 aa27.37■■□□□ 1.97
LAMA3-204ENST00000585600 DPP8Q6V1X1 898 aaPredicted RBP27.37■■□□□ 1.97
LAMA3-204ENST00000585600 DALRD3Q5D0E6 543 aaKnown RBP27.36■■□□□ 1.97
LAMA3-204ENST00000585600 TTC39AQ5SRH9 613 aa27.36■■□□□ 1.97
LAMA3-204ENST00000585600 RBM25P49756 843 aaKnown RBP27.35■■□□□ 1.97
LAMA3-204ENST00000585600 SCARF1Q14162 830 aa27.35■■□□□ 1.97
LAMA3-204ENST00000585600 CC2D2BQ6DHV5 1058 aa27.35■■□□□ 1.97
LAMA3-204ENST00000585600 C15orf52Q6ZUT6 534 aaKnown RBP27.35■■□□□ 1.97
LAMA3-204ENST00000585600 FBXO33Q7Z6M2 555 aa27.35■■□□□ 1.97
LAMA3-204ENST00000585600 TBC1D2Q9BYX2 928 aa27.35■■□□□ 1.97
LAMA3-204ENST00000585600 LTBP1Q14766 1721 aa27.35■■□□□ 1.97
LAMA3-204ENST00000585600 C6orf229H3BNL8 230 aa27.34■■□□□ 1.97
LAMA3-204ENST00000585600 EIF5BO60841 1220 aaKnown RBP27.34■■□□□ 1.97
LAMA3-204ENST00000585600 MAP4K4O95819 1239 aaPredicted RBP27.34■■□□□ 1.97
LAMA3-204ENST00000585600 ZNF512BQ96KM6 892 aaPredicted RBP27.34■■□□□ 1.97
LAMA3-204ENST00000585600 NDUFB9Q9Y6M9 179 aa27.34■■□□□ 1.97
LAMA3-204ENST00000585600 DUOX1Q9NRD9 1551 aa27.34■■□□□ 1.97
LAMA3-204ENST00000585600 ARID4AP29374 1257 aaPredicted RBP27.34■■□□□ 1.97
LAMA3-204ENST00000585600 SYT17Q9BSW7 474 aa27.34■■□□□ 1.97
LAMA3-204ENST00000585600 SDSP20132 328 aa27.33■■□□□ 1.97
LAMA3-204ENST00000585600 CAVIN4Q5BKX8 364 aa27.33■■□□□ 1.97
LAMA3-204ENST00000585600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.33■■□□□ 1.97
LAMA3-204ENST00000585600 CACNA1SQ13698 1873 aa27.33■■□□□ 1.96
LAMA3-204ENST00000585600 HAUS7Q99871 368 aa27.32■■□□□ 1.96
LAMA3-204ENST00000585600 RTFDC1Q9BY42 306 aaPredicted RBP27.32■■□□□ 1.96
LAMA3-204ENST00000585600 MCAMP43121 646 aa27.32■■□□□ 1.96
LAMA3-204ENST00000585600 CCDC93Q567U6 631 aa27.32■■□□□ 1.96
LAMA3-204ENST00000585600 ARAP2Q8WZ64 1704 aa27.32■■□□□ 1.96
LAMA3-204ENST00000585600 BCS1LQ9Y276 419 aa27.32■■□□□ 1.96
LAMA3-204ENST00000585600 HIBADHP31937 336 aaKnown RBP27.31■■□□□ 1.96
LAMA3-204ENST00000585600 PI16Q6UXB8 463 aa27.31■■□□□ 1.96
LAMA3-204ENST00000585600 EDC3Q96F86 508 aaKnown RBP27.31■■□□□ 1.96
LAMA3-204ENST00000585600 UQCRFS1P1P0C7P4 283 aa27.3■■□□□ 1.96
LAMA3-204ENST00000585600 MED23Q9ULK4 1368 aa27.3■■□□□ 1.96
LAMA3-204ENST00000585600 SNRKQ9NRH2 765 aa27.3■■□□□ 1.96
LAMA3-204ENST00000585600 TRIM6-TRIM34B2RNG4 842 aa27.29■■□□□ 1.96
LAMA3-204ENST00000585600 RASGRF1Q13972 1273 aa27.29■■□□□ 1.96
LAMA3-204ENST00000585600 VPS37DQ86XT2 251 aa27.29■■□□□ 1.96
LAMA3-204ENST00000585600 RTKN2Q8IZC4 609 aa27.29■■□□□ 1.96
LAMA3-204ENST00000585600 DNAJC2Q99543 621 aaKnown RBP27.29■■□□□ 1.96
LAMA3-204ENST00000585600 ANTXR1Q9H6X2 564 aa27.29■■□□□ 1.96
LAMA3-204ENST00000585600 HMG20BQ9P0W2 317 aa27.29■■□□□ 1.96
LAMA3-204ENST00000585600 IQSEC3Q9UPP2 1182 aaPredicted RBP27.29■■□□□ 1.96
LAMA3-204ENST00000585600 RIMBP2O15034 1052 aa27.28■■□□□ 1.96
LAMA3-204ENST00000585600 GRIPAP1Q4V328 841 aa27.28■■□□□ 1.96
LAMA3-204ENST00000585600 RILPL2Q969X0 211 aa27.28■■□□□ 1.96
LAMA3-204ENST00000585600 BRCA1P38398 1863 aaKnown RBP27.28■■□□□ 1.96
LAMA3-204ENST00000585600 ZAP70P43403 619 aa27.27■■□□□ 1.96
LAMA3-204ENST00000585600 WASHC4Q2M389 1173 aa27.27■■□□□ 1.96
LAMA3-204ENST00000585600 FKBP4Q02790 459 aaKnown RBP eCLIP27.27■■□□□ 1.96
LAMA3-204ENST00000585600 SOGA3Q5TF21 947 aa27.27■■□□□ 1.96
LAMA3-204ENST00000585600 ZC3H12CQ9C0D7 883 aaKnown RBP27.27■■□□□ 1.96
LAMA3-204ENST00000585600 CD209Q9NNX6 404 aa27.26■■□□□ 1.95
LAMA3-204ENST00000585600 GNL3LQ9NVN8 582 aaKnown RBP27.26■■□□□ 1.95
LAMA3-204ENST00000585600 CDC45O75419 566 aa27.25■■□□□ 1.95
LAMA3-204ENST00000585600 TBC1D9Q6ZT07 1266 aa27.25■■□□□ 1.95
LAMA3-204ENST00000585600 SPATA5Q8NB90 893 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms