RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 CCDC27Q2M243 656 aa18.61■□□□□ 0.57
SDF2-202ENST00000585428 REM2Q8IYK8 340 aaPredicted RBP18.61■□□□□ 0.57
SDF2-202ENST00000585428 POLR2AP24928 1970 aaKnown RBP18.61■□□□□ 0.57
SDF2-202ENST00000585428 NEURL1BA8MQ27 555 aa18.6■□□□□ 0.57
SDF2-202ENST00000585428 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
SDF2-202ENST00000585428 CWF19L2Q2TBE0 894 aaKnown RBP18.6■□□□□ 0.57
SDF2-202ENST00000585428 DACT2Q5SW24 774 aa18.6■□□□□ 0.57
SDF2-202ENST00000585428 G2E3Q7L622 706 aa18.6■□□□□ 0.57
SDF2-202ENST00000585428 TSR2Q969E8 191 aaKnown RBP18.6■□□□□ 0.57
SDF2-202ENST00000585428 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
SDF2-202ENST00000585428 NEXNQ0ZGT2 675 aa18.59■□□□□ 0.57
SDF2-202ENST00000585428 NBPF9Q3BBW0 867 aa18.59■□□□□ 0.57
SDF2-202ENST00000585428 TXNRD3Q86VQ6 643 aa18.59■□□□□ 0.57
SDF2-202ENST00000585428 WWC1Q8IX03 1113 aa18.59■□□□□ 0.57
SDF2-202ENST00000585428 MED23Q9ULK4 1368 aa18.58■□□□□ 0.57
SDF2-202ENST00000585428 CCDC184Q52MB2 194 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 STRIP1Q5VSL9 837 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 RASAL3Q86YV0 1011 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 MXD3Q9BW11 206 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 STK31Q9BXU1 1019 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 COA1Q9GZY4 146 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
SDF2-202ENST00000585428 SCAF8Q9UPN6 1271 aaKnown RBP18.58■□□□□ 0.56
SDF2-202ENST00000585428 LEMD3Q9Y2U8 911 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 CASP8AP2Q9UKL3 1982 aa18.58■□□□□ 0.56
SDF2-202ENST00000585428 WNT10BO00744 389 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 CSF1RP07333 972 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 MMP14P50281 582 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 CASP7P55210 303 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 GCKRQ14397 625 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
SDF2-202ENST00000585428 PRAMEF18Q5VWM3 479 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 MOB2Q70IA6 237 aa18.57■□□□□ 0.56
SDF2-202ENST00000585428 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
SDF2-202ENST00000585428 OGFOD1Q8N543 542 aa18.56■□□□□ 0.56
SDF2-202ENST00000585428 UBE2Q2LH0YL09 131 aa18.55■□□□□ 0.56
SDF2-202ENST00000585428 TTLL5Q6EMB2 1281 aa18.55■□□□□ 0.56
SDF2-202ENST00000585428 MYO3BQ8WXR4 1341 aa18.54■□□□□ 0.56
SDF2-202ENST00000585428 ITGA6P23229 1130 aa18.54■□□□□ 0.56
SDF2-202ENST00000585428 IGHMBP2P38935 993 aaKnown RBP18.54■□□□□ 0.56
SDF2-202ENST00000585428 ANKRD2Q9GZV1 360 aa18.54■□□□□ 0.56
SDF2-202ENST00000585428 ZNF804BA4D1E1 1349 aa18.53■□□□□ 0.56
SDF2-202ENST00000585428 IL16Q14005 1332 aa18.53■□□□□ 0.56
SDF2-202ENST00000585428 SLC34A2O95436 690 aa18.53■□□□□ 0.56
SDF2-202ENST00000585428 TM4SF4P48230 202 aa18.53■□□□□ 0.56
SDF2-202ENST00000585428 ZBED3Q96IU2 234 aaPredicted RBP18.53■□□□□ 0.56
SDF2-202ENST00000585428 FLIIQ13045 1269 aa18.52■□□□□ 0.56
SDF2-202ENST00000585428 VAMP4O75379 141 aa18.51■□□□□ 0.55
SDF2-202ENST00000585428 KLRK1P26718 216 aa18.51■□□□□ 0.55
SDF2-202ENST00000585428 CTU1Q7Z7A3 348 aaKnown RBP18.51■□□□□ 0.55
SDF2-202ENST00000585428 LINS1Q8NG48 757 aa18.51■□□□□ 0.55
SDF2-202ENST00000585428 MPHOSPH8Q99549 860 aa18.51■□□□□ 0.55
SDF2-202ENST00000585428 GTF2IP78347 998 aa18.5■□□□□ 0.55
SDF2-202ENST00000585428 CHRNDQ07001 517 aa18.5■□□□□ 0.55
SDF2-202ENST00000585428 DNAAF4Q8WXU2 420 aa18.5■□□□□ 0.55
SDF2-202ENST00000585428 FBXW7Q969H0 707 aa18.5■□□□□ 0.55
SDF2-202ENST00000585428 CD209Q9NNX6 404 aa18.5■□□□□ 0.55
SDF2-202ENST00000585428 IRS2Q9Y4H2 1338 aa18.49■□□□□ 0.55
SDF2-202ENST00000585428 TBC1D8O95759 1140 aa18.49■□□□□ 0.55
SDF2-202ENST00000585428 LDLRAD1Q5T700 205 aa18.49■□□□□ 0.55
SDF2-202ENST00000585428 C15orf52Q6ZUT6 534 aaKnown RBP18.49■□□□□ 0.55
SDF2-202ENST00000585428 MYH16Q9H6N6 1097 aa18.49■□□□□ 0.55
SDF2-202ENST00000585428 PSME4Q14997 1843 aa18.49■□□□□ 0.55
SDF2-202ENST00000585428 TNRC18O15417 2968 aaPredicted RBP18.48■□□□□ 0.55
SDF2-202ENST00000585428 NF2P35240 595 aa18.48■□□□□ 0.55
SDF2-202ENST00000585428 FOXO4P98177 505 aa18.48■□□□□ 0.55
SDF2-202ENST00000585428 PTPN12Q05209 780 aaKnown RBP18.48■□□□□ 0.55
SDF2-202ENST00000585428 FKBP5Q13451 457 aaPredicted RBP18.48■□□□□ 0.55
SDF2-202ENST00000585428 NOM1Q5C9Z4 860 aaKnown RBP18.48■□□□□ 0.55
SDF2-202ENST00000585428 KIAA0825Q8IV33 1275 aa18.48■□□□□ 0.55
SDF2-202ENST00000585428 HDAC9Q9UKV0 1011 aa18.48■□□□□ 0.55
SDF2-202ENST00000585428 PAPPA2Q9BXP8 1791 aa18.47■□□□□ 0.55
SDF2-202ENST00000585428 SNAP23O00161 211 aa18.47■□□□□ 0.55
SDF2-202ENST00000585428 SASH1O94885 1247 aa18.47■□□□□ 0.55
SDF2-202ENST00000585428 TTLL12Q14166 644 aaPredicted RBP18.47■□□□□ 0.55
SDF2-202ENST00000585428 PKN2Q16513 984 aaKnown RBP18.47■□□□□ 0.55
SDF2-202ENST00000585428 WDR63Q8IWG1 891 aa18.47■□□□□ 0.55
SDF2-202ENST00000585428 ZNF296Q8WUU4 475 aaPredicted RBP18.47■□□□□ 0.55
SDF2-202ENST00000585428 ANKRD18BA2A2Z9 1011 aa18.46■□□□□ 0.55
SDF2-202ENST00000585428 BEND3Q5T5X7 828 aa18.46■□□□□ 0.55
SDF2-202ENST00000585428 ARMC9Q7Z3E5 817 aa18.46■□□□□ 0.55
SDF2-202ENST00000585428 APOBEC3FQ8IUX4 373 aaKnown RBP18.46■□□□□ 0.55
SDF2-202ENST00000585428 CERS5Q8N5B7 392 aa18.46■□□□□ 0.55
SDF2-202ENST00000585428 MTMR14Q8NCE2 650 aa18.46■□□□□ 0.55
SDF2-202ENST00000585428 CFHR5Q9BXR6 569 aa18.46■□□□□ 0.55
SDF2-202ENST00000585428 TAF5LO75529 589 aa18.45■□□□□ 0.54
SDF2-202ENST00000585428 IL1R1P14778 569 aa18.45■□□□□ 0.54
SDF2-202ENST00000585428 SOX10P56693 466 aa18.45■□□□□ 0.54
SDF2-202ENST00000585428 HELBQ8NG08 1087 aaPredicted RBP18.45■□□□□ 0.54
SDF2-202ENST00000585428 DEFB129Q9H1M3 183 aa18.45■□□□□ 0.54
SDF2-202ENST00000585428 HPS5Q9UPZ3 1129 aa18.45■□□□□ 0.54
SDF2-202ENST00000585428 FANCIQ9NVI1 1328 aa18.45■□□□□ 0.54
SDF2-202ENST00000585428 GPR25O00155 361 aa18.44■□□□□ 0.54
SDF2-202ENST00000585428 KCNJ4P48050 445 aa18.44■□□□□ 0.54
SDF2-202ENST00000585428 IFIT5Q13325 482 aaKnown RBP18.44■□□□□ 0.54
SDF2-202ENST00000585428 DLGAP5Q15398 846 aa18.44■□□□□ 0.54
SDF2-202ENST00000585428 MAP3K11Q16584 847 aa18.44■□□□□ 0.54
SDF2-202ENST00000585428 SPRYD7Q5W111 196 aa18.44■□□□□ 0.54
SDF2-202ENST00000585428 FKBP1AP62942 108 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms