RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 PODNQ7Z5L7 613 aa17.02■□□□□ 0.32
PRKCSH-201ENST00000585325 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-201ENST00000585325 HHIPL1Q96JK4 782 aa17.02■□□□□ 0.32
PRKCSH-201ENST00000585325 CSF1RP07333 972 aa17.01■□□□□ 0.31
PRKCSH-201ENST00000585325 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
PRKCSH-201ENST00000585325 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
PRKCSH-201ENST00000585325 KRT26Q7Z3Y9 468 aa17.01■□□□□ 0.31
PRKCSH-201ENST00000585325 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
PRKCSH-201ENST00000585325 FBXW7Q969H0 707 aa17.01■□□□□ 0.31
PRKCSH-201ENST00000585325 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 USP17L3A6NCW0 530 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 USP17L4A6NCW7 530 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 ADM5C9JUS6 153 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 ZNF609O15014 1411 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 GGA3Q9NZ52 723 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
PRKCSH-201ENST00000585325 POLR2AP24928 1970 aaKnown RBP16.99■□□□□ 0.31
PRKCSH-201ENST00000585325 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 ZNF521Q96K83 1311 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 KCNJ4P48050 445 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 ZNF280AP59817 542 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 IFIT5Q13325 482 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 ZIC5Q96T25 663 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
PRKCSH-201ENST00000585325 ASTN2O75129 1339 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 PDE4DIPQ5VU43 2346 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 SOX10P56693 466 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 HUNKP57058 714 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 FOXO4P98177 505 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 CHRNDQ07001 517 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 NOGQ13253 232 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 SCARF1Q14162 830 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 GMLQ99445 158 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 MYOZ2Q9NPC6 264 aa16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 C9orf78Q9NZ63 289 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-201ENST00000585325 GRM8O00222 908 aa16.96■□□□□ 0.31
PRKCSH-201ENST00000585325 KLRK1P26718 216 aa16.96■□□□□ 0.31
PRKCSH-201ENST00000585325 DACT2Q5SW24 774 aa16.96■□□□□ 0.31
PRKCSH-201ENST00000585325 ANGEL2Q5VTE6 544 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-201ENST00000585325 MXD3Q9BW11 206 aa16.96■□□□□ 0.31
PRKCSH-201ENST00000585325 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
PRKCSH-201ENST00000585325 ZNF646O15015 1829 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-201ENST00000585325 ALDH1L1O75891 902 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 TAF7LQ5H9L4 462 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 STRIP1Q5VSL9 837 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 C2orf69Q8N8R5 385 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 GBA2Q9HCG7 927 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 MYO3BQ8WXR4 1341 aa16.95■□□□□ 0.3
PRKCSH-201ENST00000585325 A0A1B0GUL6 1792 aa16.94■□□□□ 0.3
PRKCSH-201ENST00000585325 TAF5LO75529 589 aa16.94■□□□□ 0.3
PRKCSH-201ENST00000585325 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
PRKCSH-201ENST00000585325 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
PRKCSH-201ENST00000585325 HELBQ8NG08 1087 aaPredicted RBP16.94■□□□□ 0.3
PRKCSH-201ENST00000585325 CDCA5Q96FF9 252 aa16.94■□□□□ 0.3
PRKCSH-201ENST00000585325 E9PSI1 815 aa16.93■□□□□ 0.3
PRKCSH-201ENST00000585325 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
PRKCSH-201ENST00000585325 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
PRKCSH-201ENST00000585325 TNRC18O15417 2968 aaPredicted RBP16.93■□□□□ 0.3
PRKCSH-201ENST00000585325 SNAP23O00161 211 aa16.92■□□□□ 0.3
PRKCSH-201ENST00000585325 GTF2IP78347 998 aa16.92■□□□□ 0.3
PRKCSH-201ENST00000585325 RGMBQ6NW40 437 aa16.92■□□□□ 0.3
PRKCSH-201ENST00000585325 MRPL50Q8N5N7 158 aaKnown RBP16.92■□□□□ 0.3
PRKCSH-201ENST00000585325 ZNF594Q96JF6 807 aaPredicted RBP16.92■□□□□ 0.3
PRKCSH-201ENST00000585325 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
PRKCSH-201ENST00000585325 PLIN1O60240 522 aa16.91■□□□□ 0.3
PRKCSH-201ENST00000585325 NBPF9Q3BBW0 867 aa16.91■□□□□ 0.3
PRKCSH-201ENST00000585325 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
PRKCSH-201ENST00000585325 CD209Q9NNX6 404 aa16.91■□□□□ 0.3
PRKCSH-201ENST00000585325 CNNM1Q9NRU3 951 aa16.91■□□□□ 0.3
PRKCSH-201ENST00000585325 SCAF8Q9UPN6 1271 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-201ENST00000585325 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
PRKCSH-201ENST00000585325 KIAA0825Q8IV33 1275 aa16.9■□□□□ 0.3
PRKCSH-201ENST00000585325 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
PRKCSH-201ENST00000585325 SAGE1Q9NXZ1 904 aa16.9■□□□□ 0.3
PRKCSH-201ENST00000585325 HDAC9Q9UKV0 1011 aa16.9■□□□□ 0.3
PRKCSH-201ENST00000585325 FAM155AB1AL88 458 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 WNT10BO00744 389 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 SASH1O94885 1247 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 SLFN5Q08AF3 891 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 PTPRCP08575 1304 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 IRS2Q9Y4H2 1338 aa16.89■□□□□ 0.29
PRKCSH-201ENST00000585325 C15orf52Q6ZUT6 534 aaKnown RBP16.88■□□□□ 0.29
PRKCSH-201ENST00000585325 SSH1Q8WYL5 1049 aa16.88■□□□□ 0.29
PRKCSH-201ENST00000585325 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
PRKCSH-201ENST00000585325 TRPA1O75762 1119 aa16.87■□□□□ 0.29
PRKCSH-201ENST00000585325 MMP14P50281 582 aa16.87■□□□□ 0.29
PRKCSH-201ENST00000585325 KIF23Q02241 960 aaPredicted RBP16.87■□□□□ 0.29
PRKCSH-201ENST00000585325 PRAMEF18Q5VWM3 479 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms