RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 MAP3K2Q9Y2U5 619 aa13.76□□□□□ -0.21
CSNK1D-226ENST00000585026 MED23Q9ULK4 1368 aa13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 IGHMBP2P38935 993 aaKnown RBP13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 SOX10P56693 466 aa13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 JARID2Q92833 1246 aaPredicted RBP13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 MINPP1Q9UNW1 487 aa13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 LEMD3Q9Y2U8 911 aa13.75□□□□□ -0.21
CSNK1D-226ENST00000585026 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 CCT4P50991 539 aaKnown RBP13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 SREBF2Q12772 1141 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 ARMC9Q7Z3E5 817 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 FBXW7Q969H0 707 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 ANKRD2Q9GZV1 360 aa13.74□□□□□ -0.21
CSNK1D-226ENST00000585026 PI4KAP2A4QPH2 592 aa13.73□□□□□ -0.21
CSNK1D-226ENST00000585026 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-226ENST00000585026 APOBEC3FQ8IUX4 373 aaKnown RBP13.73□□□□□ -0.21
CSNK1D-226ENST00000585026 PI4KAP1Q8N8J0 262 aa13.73□□□□□ -0.21
CSNK1D-226ENST00000585026 WNT10BO00744 389 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 TM4SF4P48230 202 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 NBPF9Q3BBW0 867 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 CCDC184Q52MB2 194 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 DACT2Q5SW24 774 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 TTLL5Q6EMB2 1281 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 GREM2Q9H772 168 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 PAPPA2Q9BXP8 1791 aa13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
CSNK1D-226ENST00000585026 TBC1D8O95759 1140 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 ALDH1A1P00352 501 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 IGKV5-2P06315 115 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 KCNJ4P48050 445 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 MOB2Q70IA6 237 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 ZNF296Q8WUU4 475 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 MRS2Q9HD23 443 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 HPS5Q9UPZ3 1129 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 COL4A1P02462 1669 aa13.71□□□□□ -0.21
CSNK1D-226ENST00000585026 SCN9AQ15858 1988 aa13.71□□□□□ -0.22
CSNK1D-226ENST00000585026 ZNF804BA4D1E1 1349 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 NEURL1BA8MQ27 555 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 H7C1W4 665 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 GPR25O00155 361 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 PRAMEF18Q5VWM3 479 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 UBE3BQ7Z3V4 1068 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 MYH16Q9H6N6 1097 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 AKAP11Q9UKA4 1901 aa13.7□□□□□ -0.22
CSNK1D-226ENST00000585026 PDE4DIPQ5VU43 2346 aa13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 FKTNO75072 461 aa13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 ITGA6P23229 1130 aa13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 INHBEP58166 350 aa13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 CWF19L2Q2TBE0 894 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 FBXO46Q6PJ61 603 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 PLA2G12BQ9BX93 195 aa13.69□□□□□ -0.22
CSNK1D-226ENST00000585026 MYO1BO43795 1136 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 PPP1R12BO60237 982 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 SASH1O94885 1247 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 SLC4A2P04920 1241 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 DLGAP5Q15398 846 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 MXD3Q9BW11 206 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 CFHR5Q9BXR6 569 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 SCAF8Q9UPN6 1271 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 PPP2R3BQ9Y5P8 575 aa13.68□□□□□ -0.22
CSNK1D-226ENST00000585026 GTF2IP78347 998 aa13.67□□□□□ -0.22
CSNK1D-226ENST00000585026 PTPN12Q05209 780 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-226ENST00000585026 MKRN3Q13064 507 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-226ENST00000585026 GCKRQ14397 625 aa13.67□□□□□ -0.22
CSNK1D-226ENST00000585026 SLC10A4Q96EP9 437 aa13.67□□□□□ -0.22
CSNK1D-226ENST00000585026 ANGEL1Q9UNK9 670 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-226ENST00000585026 ANKRD18BA2A2Z9 1011 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 MANSC4A6NHS7 340 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 WTIPA6NIX2 430 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 UNCXA6NJT0 531 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 PRKG1Q13976 671 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 CCDC27Q2M243 656 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 SUPT20HL1Q3ZLR7 823 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 LDLRAD1Q5T700 205 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 SPRYD7Q5W111 196 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 TXNRD3Q86VQ6 643 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
CSNK1D-226ENST00000585026 CSF1RP07333 972 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 CHRNDQ07001 517 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 FLIIQ13045 1269 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 FKBP5Q13451 457 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 OTUD7BQ6GQQ9 843 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 ZNF804AQ7Z570 1209 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 DNAAF4Q8WXU2 420 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 TSR2Q969E8 191 aaKnown RBP13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 DEFB129Q9H1M3 183 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 CD209Q9NNX6 404 aa13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 COL1A1P02452 1464 aaPredicted RBP13.65□□□□□ -0.22
CSNK1D-226ENST00000585026 IL16Q14005 1332 aa13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 ZBTB48P10074 688 aaPredicted RBP13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
CSNK1D-226ENST00000585026 MAP3K11Q16584 847 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms