RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 SLC4A10Q6U841 1118 aa22.59■■□□□ 1.21
ERBB2-221ENST00000584888 PODNQ7Z5L7 613 aa22.59■■□□□ 1.21
ERBB2-221ENST00000584888 AGBL3Q8NEM8 1001 aa22.59■■□□□ 1.21
ERBB2-221ENST00000584888 DCPSQ96C86 337 aaKnown RBP22.59■■□□□ 1.21
ERBB2-221ENST00000584888 SPEF2Q9C093 1822 aa22.59■■□□□ 1.21
ERBB2-221ENST00000584888 AOC2O75106 756 aa22.58■■□□□ 1.21
ERBB2-221ENST00000584888 IGHMBP2P38935 993 aaKnown RBP22.58■■□□□ 1.21
ERBB2-221ENST00000584888 CCT4P50991 539 aaKnown RBP22.58■■□□□ 1.21
ERBB2-221ENST00000584888 ZNF280AP59817 542 aaPredicted RBP22.58■■□□□ 1.21
ERBB2-221ENST00000584888 UTYO14607 1347 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 USP17L3A6NCW0 530 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 USP17L4A6NCW7 530 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 ITGA6P23229 1130 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 FAM161AQ3B820 660 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 EPHA10Q5JZY3 1008 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 USP17L1Q7RTZ2 530 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 GMLQ99445 158 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 BEGAINQ9BUH8 593 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 THSD7BQ9C0I4 1608 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 ZNF609O15014 1411 aa22.57■■□□□ 1.2
ERBB2-221ENST00000584888 MED23Q9ULK4 1368 aa22.56■■□□□ 1.2
ERBB2-221ENST00000584888 ADM5C9JUS6 153 aa22.56■■□□□ 1.2
ERBB2-221ENST00000584888 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
ERBB2-221ENST00000584888 ASTN2O75129 1339 aaPredicted RBP22.56■■□□□ 1.2
ERBB2-221ENST00000584888 USP17L8P0C7I0 530 aa22.55■■□□□ 1.2
ERBB2-221ENST00000584888 RARSP54136 660 aaKnown RBP22.55■■□□□ 1.2
ERBB2-221ENST00000584888 KAZALD1Q96I82 304 aa22.55■■□□□ 1.2
ERBB2-221ENST00000584888 GGA3Q9NZ52 723 aa22.55■■□□□ 1.2
ERBB2-221ENST00000584888 C9orf78Q9NZ63 289 aaPredicted RBP22.55■■□□□ 1.2
ERBB2-221ENST00000584888 LEMD3Q9Y2U8 911 aa22.55■■□□□ 1.2
ERBB2-221ENST00000584888 POLR2AP24928 1970 aaKnown RBP22.55■■□□□ 1.2
ERBB2-221ENST00000584888 HUNKP57058 714 aa22.54■■□□□ 1.2
ERBB2-221ENST00000584888 HNRNPUQ00839 825 aaKnown RBP eCLIP22.54■■□□□ 1.2
ERBB2-221ENST00000584888 SULF1Q8IWU6 871 aa22.54■■□□□ 1.2
ERBB2-221ENST00000584888 MPHOSPH8Q99549 860 aa22.54■■□□□ 1.2
ERBB2-221ENST00000584888 NBPF7P0C2Y1 421 aaPredicted RBP22.53■■□□□ 1.2
ERBB2-221ENST00000584888 SCARF1Q14162 830 aa22.53■■□□□ 1.2
ERBB2-221ENST00000584888 TXNRD3Q86VQ6 643 aa22.53■■□□□ 1.2
ERBB2-221ENST00000584888 ANKRD2Q9GZV1 360 aa22.53■■□□□ 1.2
ERBB2-221ENST00000584888 COA1Q9GZY4 146 aa22.53■■□□□ 1.2
ERBB2-221ENST00000584888 GBA2Q9HCG7 927 aaPredicted RBP22.53■■□□□ 1.2
ERBB2-221ENST00000584888 LMBR1LQ6UX01 489 aa22.52■■□□□ 1.2
ERBB2-221ENST00000584888 C2orf69Q8N8R5 385 aa22.52■■□□□ 1.2
ERBB2-221ENST00000584888 SUCLG2Q96I99 432 aa22.52■■□□□ 1.2
ERBB2-221ENST00000584888 MYOZ2Q9NPC6 264 aa22.52■■□□□ 1.2
ERBB2-221ENST00000584888 ZNF804BA4D1E1 1349 aa22.52■■□□□ 1.2
ERBB2-221ENST00000584888 ANKRD18BA2A2Z9 1011 aa22.51■■□□□ 1.19
ERBB2-221ENST00000584888 DACT2Q5SW24 774 aa22.51■■□□□ 1.19
ERBB2-221ENST00000584888 ANGEL2Q5VTE6 544 aaKnown RBP22.51■■□□□ 1.19
ERBB2-221ENST00000584888 MXD3Q9BW11 206 aa22.51■■□□□ 1.19
ERBB2-221ENST00000584888 USP44Q9H0E7 712 aa22.51■■□□□ 1.19
ERBB2-221ENST00000584888 NOB1Q9ULX3 412 aaKnown RBP22.51■■□□□ 1.19
ERBB2-221ENST00000584888 PSME4Q14997 1843 aa22.51■■□□□ 1.19
ERBB2-221ENST00000584888 KLRK1P26718 216 aa22.5■■□□□ 1.19
ERBB2-221ENST00000584888 STRIP1Q5VSL9 837 aa22.5■■□□□ 1.19
ERBB2-221ENST00000584888 CHRNDQ07001 517 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 NOGQ13253 232 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 IFIT5Q13325 482 aaKnown RBP22.49■■□□□ 1.19
ERBB2-221ENST00000584888 RGMBQ6NW40 437 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 FBXW7Q969H0 707 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 CDCA5Q96FF9 252 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 ZIC5Q96T25 663 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 TSKSQ9UJT2 592 aa22.49■■□□□ 1.19
ERBB2-221ENST00000584888 A0A1B0GUL6 1792 aa22.48■■□□□ 1.19
ERBB2-221ENST00000584888 RABL6Q3YEC7 729 aaPredicted RBP22.48■■□□□ 1.19
ERBB2-221ENST00000584888 ARHGAP45Q92619 1136 aa22.48■■□□□ 1.19
ERBB2-221ENST00000584888 CA12O43570 354 aa22.47■■□□□ 1.19
ERBB2-221ENST00000584888 KCNJ4P48050 445 aa22.47■■□□□ 1.19
ERBB2-221ENST00000584888 OGFOD1Q8N543 542 aa22.47■■□□□ 1.19
ERBB2-221ENST00000584888 CHMP3Q9Y3E7 222 aa22.47■■□□□ 1.19
ERBB2-221ENST00000584888 ZBED9Q6R2W3 1325 aa22.47■■□□□ 1.19
ERBB2-221ENST00000584888 MYO3BQ8WXR4 1341 aa22.47■■□□□ 1.19
ERBB2-221ENST00000584888 FAM155AB1AL88 458 aaPredicted RBP22.46■■□□□ 1.19
ERBB2-221ENST00000584888 TTLL5Q6EMB2 1281 aa22.46■■□□□ 1.19
ERBB2-221ENST00000584888 ANKRD44Q8N8A2 993 aa22.46■■□□□ 1.19
ERBB2-221ENST00000584888 CCDC102AQ96A19 550 aa22.46■■□□□ 1.19
ERBB2-221ENST00000584888 API5Q9BZZ5 524 aaKnown RBP22.46■■□□□ 1.19
ERBB2-221ENST00000584888 PITPNM2Q9BZ72 1349 aa22.46■■□□□ 1.19
ERBB2-221ENST00000584888 SNAP23O00161 211 aa22.45■■□□□ 1.18
ERBB2-221ENST00000584888 TAF5LO75529 589 aa22.45■■□□□ 1.18
ERBB2-221ENST00000584888 ZNF157P51786 506 aaPredicted RBP22.45■■□□□ 1.18
ERBB2-221ENST00000584888 CCDC57Q2TAC2 916 aa22.45■■□□□ 1.18
ERBB2-221ENST00000584888 NBPF9Q3BBW0 867 aa22.45■■□□□ 1.18
ERBB2-221ENST00000584888 HELBQ8NG08 1087 aaPredicted RBP22.45■■□□□ 1.18
ERBB2-221ENST00000584888 ZNF594Q96JF6 807 aaPredicted RBP22.45■■□□□ 1.18
ERBB2-221ENST00000584888 BICC1Q9H694 974 aaKnown RBP22.45■■□□□ 1.18
ERBB2-221ENST00000584888 GTF2IP78347 998 aa22.44■■□□□ 1.18
ERBB2-221ENST00000584888 CD209Q9NNX6 404 aa22.44■■□□□ 1.18
ERBB2-221ENST00000584888 SCAF8Q9UPN6 1271 aaKnown RBP22.44■■□□□ 1.18
ERBB2-221ENST00000584888 IRS2Q9Y4H2 1338 aa22.44■■□□□ 1.18
ERBB2-221ENST00000584888 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
ERBB2-221ENST00000584888 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
ERBB2-221ENST00000584888 WNT10BO00744 389 aa22.42■■□□□ 1.18
ERBB2-221ENST00000584888 BCAR3O75815 825 aa22.42■■□□□ 1.18
ERBB2-221ENST00000584888 MMP14P50281 582 aa22.42■■□□□ 1.18
ERBB2-221ENST00000584888 KIF23Q02241 960 aaPredicted RBP22.42■■□□□ 1.18
ERBB2-221ENST00000584888 C15orf52Q6ZUT6 534 aaKnown RBP22.42■■□□□ 1.18
ERBB2-221ENST00000584888 FKBP1BP68106 108 aa22.41■■□□□ 1.18
ERBB2-221ENST00000584888 INTS3Q68E01 1043 aaKnown RBP22.41■■□□□ 1.18
ERBB2-221ENST00000584888 LDHAL6AQ6ZMR3 332 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms