RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SNAP23O00161 211 aa22.46■■□□□ 1.19
RFFL-211ENST00000584541 CAVIN4Q5BKX8 364 aa22.46■■□□□ 1.19
RFFL-211ENST00000584541 XAGE2Q96GT9 111 aa22.46■■□□□ 1.19
RFFL-211ENST00000584541 GPATCH3Q96I76 525 aa22.46■■□□□ 1.19
RFFL-211ENST00000584541 PSMD1Q99460 953 aa22.46■■□□□ 1.19
RFFL-211ENST00000584541 RTFDC1Q9BY42 306 aaPredicted RBP22.46■■□□□ 1.19
RFFL-211ENST00000584541 SNED1Q8TER0 1413 aa22.46■■□□□ 1.19
RFFL-211ENST00000584541 FKBP4Q02790 459 aaKnown RBP eCLIP22.45■■□□□ 1.18
RFFL-211ENST00000584541 ZC3H12CQ9C0D7 883 aaKnown RBP22.45■■□□□ 1.18
RFFL-211ENST00000584541 MED23Q9ULK4 1368 aa22.45■■□□□ 1.18
RFFL-211ENST00000584541 WASHC4Q2M389 1173 aa22.44■■□□□ 1.18
RFFL-211ENST00000584541 C15orf52Q6ZUT6 534 aaKnown RBP22.44■■□□□ 1.18
RFFL-211ENST00000584541 C16orf71Q8IYS4 520 aaPredicted RBP22.44■■□□□ 1.18
RFFL-211ENST00000584541 DBNDD2Q9BQY9 259 aa22.44■■□□□ 1.18
RFFL-211ENST00000584541 TAOK3Q9H2K8 898 aa22.44■■□□□ 1.18
RFFL-211ENST00000584541 MYH13Q9UKX3 1938 aa22.44■■□□□ 1.18
RFFL-211ENST00000584541 WTIPA6NIX2 430 aaPredicted RBP22.43■■□□□ 1.18
RFFL-211ENST00000584541 ADORA1P30542 326 aa22.43■■□□□ 1.18
RFFL-211ENST00000584541 GPR162Q16538 588 aa22.43■■□□□ 1.18
RFFL-211ENST00000584541 CCDC158Q5M9N0 1113 aa22.43■■□□□ 1.18
RFFL-211ENST00000584541 VPS37DQ86XT2 251 aa22.43■■□□□ 1.18
RFFL-211ENST00000584541 DBNLQ9UJU6 430 aaKnown RBP22.43■■□□□ 1.18
RFFL-211ENST00000584541 G3V3G9 751 aa22.42■■□□□ 1.18
RFFL-211ENST00000584541 DCAF8Q5TAQ9 597 aa22.42■■□□□ 1.18
RFFL-211ENST00000584541 ZNF804AQ7Z570 1209 aa22.42■■□□□ 1.18
RFFL-211ENST00000584541 VPS33BQ9H267 617 aa22.42■■□□□ 1.18
RFFL-211ENST00000584541 TLR7Q9NYK1 1049 aaKnown RBP22.42■■□□□ 1.18
RFFL-211ENST00000584541 CCDC88AQ3V6T2 1871 aa22.42■■□□□ 1.18
RFFL-211ENST00000584541 LTBP3Q9NS15 1303 aa22.41■■□□□ 1.18
RFFL-211ENST00000584541 RIMBP2O15034 1052 aa22.41■■□□□ 1.18
RFFL-211ENST00000584541 MX1P20591 662 aa22.41■■□□□ 1.18
RFFL-211ENST00000584541 TTC39AQ5SRH9 613 aa22.41■■□□□ 1.18
RFFL-211ENST00000584541 ARHGAP27Q6ZUM4 889 aa22.41■■□□□ 1.18
RFFL-211ENST00000584541 GPR101Q96P66 508 aaPredicted RBP22.41■■□□□ 1.18
RFFL-211ENST00000584541 GNL3LQ9NVN8 582 aaKnown RBP22.41■■□□□ 1.18
RFFL-211ENST00000584541 TTC41PQ6P2S7 1318 aa22.4■■□□□ 1.18
RFFL-211ENST00000584541 CHD4Q14839 1912 aa22.4■■□□□ 1.18
RFFL-211ENST00000584541 YBX3P16989 372 aaKnown RBP eCLIP22.4■■□□□ 1.18
RFFL-211ENST00000584541 KLRK1P26718 216 aa22.4■■□□□ 1.18
RFFL-211ENST00000584541 HIBADHP31937 336 aaKnown RBP22.4■■□□□ 1.18
RFFL-211ENST00000584541 GYG1P46976 350 aa22.4■■□□□ 1.18
RFFL-211ENST00000584541 ECHDC1Q9NTX5 307 aa22.4■■□□□ 1.18
RFFL-211ENST00000584541 IRS2Q9Y4H2 1338 aa22.39■■□□□ 1.18
RFFL-211ENST00000584541 NFKBIEO00221 500 aa22.39■■□□□ 1.17
RFFL-211ENST00000584541 PPIP5K2O43314 1243 aa22.39■■□□□ 1.17
RFFL-211ENST00000584541 UQCRFS1P1P0C7P4 283 aa22.39■■□□□ 1.17
RFFL-211ENST00000584541 PDE4AP27815 886 aa22.39■■□□□ 1.17
RFFL-211ENST00000584541 CCDC102BQ68D86 513 aa22.39■■□□□ 1.17
RFFL-211ENST00000584541 OTUD7AQ8TE49 926 aaPredicted RBP22.39■■□□□ 1.17
RFFL-211ENST00000584541 FAM84BQ96KN1 310 aaPredicted RBP22.39■■□□□ 1.17
RFFL-211ENST00000584541 ERC2O15083 957 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 BCAMP50895 628 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 KIAA2012Q0VF49 1180 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 AOC3Q16853 763 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 FBXO33Q7Z6M2 555 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 TXNRD3Q86VQ6 643 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 PLEKHM2Q8IWE5 1019 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 COA1Q9GZY4 146 aa22.38■■□□□ 1.17
RFFL-211ENST00000584541 ZNF277Q9NRM2 450 aaPredicted RBP22.38■■□□□ 1.17
RFFL-211ENST00000584541 SALL3Q9BXA9 1300 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 GRIN3BO60391 1043 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 FRAT2O75474 233 aaPredicted RBP22.37■■□□□ 1.17
RFFL-211ENST00000584541 IARSP41252 1262 aaKnown RBP22.37■■□□□ 1.17
RFFL-211ENST00000584541 PHKA1P46020 1223 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 PDE1AP54750 535 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 LARGE2Q8N3Y3 721 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 STAP2Q9UGK3 403 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 SBF1O95248 1867 aa22.37■■□□□ 1.17
RFFL-211ENST00000584541 AOX1Q06278 1338 aa22.36■■□□□ 1.17
RFFL-211ENST00000584541 DICER1Q9UPY3 1922 aaKnown RBP22.36■■□□□ 1.17
RFFL-211ENST00000584541 DCAF8L1A6NGE4 600 aa22.36■■□□□ 1.17
RFFL-211ENST00000584541 RGS3P49796 1198 aa22.36■■□□□ 1.17
RFFL-211ENST00000584541 RASSF7Q02833 373 aa22.36■■□□□ 1.17
RFFL-211ENST00000584541 ZNF512BQ96KM6 892 aaPredicted RBP22.36■■□□□ 1.17
RFFL-211ENST00000584541 SEMA3EO15041 775 aa22.35■■□□□ 1.17
RFFL-211ENST00000584541 GLRX3O76003 335 aaKnown RBP22.35■■□□□ 1.17
RFFL-211ENST00000584541 ATP5JP18859 108 aa22.35■■□□□ 1.17
RFFL-211ENST00000584541 ARID4AP29374 1257 aaPredicted RBP22.35■■□□□ 1.17
RFFL-211ENST00000584541 OSBPL3Q9H4L5 887 aa22.35■■□□□ 1.17
RFFL-211ENST00000584541 CD209Q9NNX6 404 aa22.35■■□□□ 1.17
RFFL-211ENST00000584541 AKAP11Q9UKA4 1901 aa22.34■■□□□ 1.17
RFFL-211ENST00000584541 DOK7Q18PE1 504 aa22.34■■□□□ 1.17
RFFL-211ENST00000584541 NIM1KQ8IY84 436 aa22.34■■□□□ 1.17
RFFL-211ENST00000584541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.34■■□□□ 1.17
RFFL-211ENST00000584541 IL1R1P14778 569 aa22.33■■□□□ 1.17
RFFL-211ENST00000584541 TSHZ3Q63HK5 1081 aa22.33■■□□□ 1.17
RFFL-211ENST00000584541 PODNQ7Z5L7 613 aa22.33■■□□□ 1.17
RFFL-211ENST00000584541 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
RFFL-211ENST00000584541 DENND2AQ9ULE3 1009 aa22.33■■□□□ 1.17
RFFL-211ENST00000584541 AK9Q5TCS8 1911 aa22.33■■□□□ 1.16
RFFL-211ENST00000584541 ECE2O60344 883 aa22.32■■□□□ 1.16
RFFL-211ENST00000584541 LMNB1P20700 586 aa22.32■■□□□ 1.16
RFFL-211ENST00000584541 SKAP1Q86WV1 359 aa22.32■■□□□ 1.16
RFFL-211ENST00000584541 TDRD7Q8NHU6 1098 aaKnown RBP22.32■■□□□ 1.16
RFFL-211ENST00000584541 BOLA2Q9H3K6 86 aa22.32■■□□□ 1.16
RFFL-211ENST00000584541 DBNDD1Q9H9R9 158 aa22.32■■□□□ 1.16
RFFL-211ENST00000584541 IQSEC3Q9UPP2 1182 aaPredicted RBP22.32■■□□□ 1.16
RFFL-211ENST00000584541 ZBTB22O15209 634 aa22.31■■□□□ 1.16
RFFL-211ENST00000584541 PI4K2BQ8TCG2 481 aa22.31■■□□□ 1.16
RFFL-211ENST00000584541 PSME4Q14997 1843 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms