RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 RGS22Q8NE09 1264 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 METTL22Q9BUU2 404 aaPredicted RBP10.14□□□□□ -0.79
BDNF-219ENST00000584049 HELLSQ9NRZ9 838 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
BDNF-219ENST00000584049 ELF2Q15723 593 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 NBPF11Q86T75 865 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 KBTBD3Q8NAB2 608 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 TPM4P67936 248 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 STOX1Q6ZVD7 989 aa10.14□□□□□ -0.79
BDNF-219ENST00000584049 ME1P48163 572 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 BMS1Q14692 1282 aaKnown RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 EDC3Q96F86 508 aaKnown RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 SPEF2Q9C093 1822 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 YEATS4O95619 227 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 CEBPZQ03701 1054 aaKnown RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 CCDC93Q567U6 631 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 E4F1Q66K89 784 aaPredicted RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 THEMISQ8N1K5 641 aaPredicted RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 EVCP57679 992 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 PTPN12Q05209 780 aaKnown RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 C14orf37Q86TY3 774 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 KCNG4Q8TDN1 519 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 PPP1R13BQ96KQ4 1090 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 TRMT1Q9NXH9 659 aaKnown RBP10.13□□□□□ -0.79
BDNF-219ENST00000584049 KIAA1468Q9P260 1216 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 CARMIL3Q8ND23 1372 aa10.13□□□□□ -0.79
BDNF-219ENST00000584049 C5P01031 1676 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 SFPQP23246 707 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-219ENST00000584049 ZRSR1Q15695 479 aaKnown RBP10.12□□□□□ -0.79
BDNF-219ENST00000584049 EPHA10Q5JZY3 1008 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 ILDR1Q86SU0 546 aaPredicted RBP10.12□□□□□ -0.79
BDNF-219ENST00000584049 PCDHA7Q9UN72 937 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 KIF13AQ9H1H9 1805 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 KCNA6P17658 529 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 TFCP2Q12800 502 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 SDF4Q9BRK5 362 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 FTOQ9C0B1 505 aaKnown RBP eCLIP10.12□□□□□ -0.79
BDNF-219ENST00000584049 POLR3EQ9NVU0 708 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 IGSF3O75054 1194 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 CCDC129Q6ZRS4 1044 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 KLHDC4Q8TBB5 520 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 SRRTQ9BXP5 876 aaKnown RBP10.12□□□□□ -0.79
BDNF-219ENST00000584049 PHLPP2Q6ZVD8 1323 aa10.12□□□□□ -0.79
BDNF-219ENST00000584049 PRAMEF22A3QJZ6 481 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 APOBRQ0VD83 1088 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 LRRC59Q96AG4 307 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 GPR108Q9NPR9 543 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 TMEM94Q12767 1356 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 IKBKBO14920 756 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 NLRP12P59046 1061 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 AIMP1Q12904 312 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 ZMYM1Q5SVZ6 1142 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 BRAPQ7Z569 592 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 LINC00301Q8NCQ3 95 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.11□□□□□ -0.79
BDNF-219ENST00000584049 MYO1BO43795 1136 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 PDIA3P30101 505 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 ARMCX5Q6P1M9 558 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 SEC62Q99442 399 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 DNAJC2Q99543 621 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 DBNDD2Q9BQY9 259 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 LRRC2Q9BYS8 371 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 XPO4Q9C0E2 1151 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 PODXL2Q9NZ53 605 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 NEDD4P46934 1319 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 AFDNP55196 1824 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 SETD1BQ9UPS6 1966 aaKnown RBP10.11□□□□□ -0.79
BDNF-219ENST00000584049 SCN11AQ9UI33 1791 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 ARHGEF25Q86VW2 580 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 MYD88Q99836 296 aa10.11□□□□□ -0.79
BDNF-219ENST00000584049 TMC6Q7Z403 805 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 FCHSD1Q86WN1 690 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 XAGE3Q8WTP9 111 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 ZNF446Q9NWS9 450 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 E7EWF7 191 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 STK38Q15208 465 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 TIGD1Q96MW7 591 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 ARGLU1Q9NWB6 273 aaPredicted RBP10.1□□□□□ -0.79
BDNF-219ENST00000584049 IFNKQ9P0W0 207 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.79
BDNF-219ENST00000584049 V9GYY5 206 aaPredicted RBP10.1□□□□□ -0.79
BDNF-219ENST00000584049 PLEKHG2Q9H7P9 1386 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 ATP8B1O43520 1251 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 SMC2O95347 1197 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
BDNF-219ENST00000584049 TPM1P09493 284 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 ETF1P62495 437 aaKnown RBP10.1□□□□□ -0.79
BDNF-219ENST00000584049 DPCR1Q3MIW9 517 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 ZNF790Q6PG37 636 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 CALCOCO1Q9P1Z2 691 aa10.1□□□□□ -0.79
BDNF-219ENST00000584049 DHX16O60231 1041 aaKnown RBP10.09□□□□□ -0.79
BDNF-219ENST00000584049 NDUFA8P51970 172 aa10.09□□□□□ -0.79
BDNF-219ENST00000584049 CBFA2T2O43439 604 aa10.09□□□□□ -0.79
BDNF-219ENST00000584049 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
BDNF-219ENST00000584049 NCAPHQ15003 741 aa10.09□□□□□ -0.79
BDNF-219ENST00000584049 SF3A1Q15459 793 aaKnown RBP10.09□□□□□ -0.79
BDNF-219ENST00000584049 SYT10Q6XYQ8 523 aa10.09□□□□□ -0.79
BDNF-219ENST00000584049 ANKRD13DQ6ZTN6 518 aa10.09□□□□□ -0.79
BDNF-219ENST00000584049 DDX46Q7L014 1031 aaKnown RBP10.09□□□□□ -0.79
BDNF-219ENST00000584049 PAG1Q9NWQ8 432 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms