RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 GORABQ5T7V8 394 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 MSL1Q68DK7 614 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
CASC3-209ENST00000583902 CCDC85AQ96PX6 553 aaPredicted RBP11.24□□□□□ -0.61
CASC3-209ENST00000583902 PUS3Q9BZE2 481 aaKnown RBP11.24□□□□□ -0.61
CASC3-209ENST00000583902 VPS33BQ9H267 617 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 ATP6V0A2Q9Y487 856 aa11.24□□□□□ -0.61
CASC3-209ENST00000583902 AK9Q5TCS8 1911 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 HIP1O00291 1037 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
CASC3-209ENST00000583902 KCNJ4P48050 445 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 CAVIN4Q5BKX8 364 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 C3orf67Q6ZVT6 689 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 C2CD5Q86YS7 1000 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
CASC3-209ENST00000583902 PDS5AQ29RF7 1337 aaKnown RBP11.23□□□□□ -0.61
CASC3-209ENST00000583902 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
CASC3-209ENST00000583902 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
CASC3-209ENST00000583902 TTF1Q15361 905 aaPredicted RBP11.22□□□□□ -0.61
CASC3-209ENST00000583902 TTLL6Q8N841 843 aa11.22□□□□□ -0.61
CASC3-209ENST00000583902 SUPT20HQ8NEM7 779 aa11.22□□□□□ -0.61
CASC3-209ENST00000583902 EVI5LQ96CN4 794 aa11.22□□□□□ -0.61
CASC3-209ENST00000583902 XAGE2Q96GT9 111 aa11.22□□□□□ -0.61
CASC3-209ENST00000583902 NEUROD6Q96NK8 337 aa11.22□□□□□ -0.61
CASC3-209ENST00000583902 SGIP1Q9BQI5 828 aa11.22□□□□□ -0.61
CASC3-209ENST00000583902 DBNLQ9UJU6 430 aaKnown RBP11.22□□□□□ -0.61
CASC3-209ENST00000583902 TAF1P21675 1872 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 ZNF804BA4D1E1 1349 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 EPB41L2O43491 1005 aaKnown RBP11.21□□□□□ -0.61
CASC3-209ENST00000583902 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 PI4K2BQ8TCG2 481 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 EYA3Q99504 573 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 ANKIB1Q9P2G1 1089 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 GGA1Q9UJY5 639 aa11.21□□□□□ -0.61
CASC3-209ENST00000583902 COL11A2P13942 1736 aaPredicted RBP11.21□□□□□ -0.62
CASC3-209ENST00000583902 ARID4AP29374 1257 aaPredicted RBP11.2□□□□□ -0.62
CASC3-209ENST00000583902 TTC39AQ5SRH9 613 aa11.2□□□□□ -0.62
CASC3-209ENST00000583902 C16orf71Q8IYS4 520 aaPredicted RBP11.2□□□□□ -0.62
CASC3-209ENST00000583902 ZNF622Q969S3 477 aaKnown RBP eCLIP11.2□□□□□ -0.62
CASC3-209ENST00000583902 HAUS7Q99871 368 aa11.2□□□□□ -0.62
CASC3-209ENST00000583902 DBNDD2Q9BQY9 259 aa11.2□□□□□ -0.62
CASC3-209ENST00000583902 CCDC8Q9H0W5 538 aaPredicted RBP11.2□□□□□ -0.62
CASC3-209ENST00000583902 PIM2Q9P1W9 311 aa11.2□□□□□ -0.62
CASC3-209ENST00000583902 DUOX1Q9NRD9 1551 aa11.2□□□□□ -0.62
CASC3-209ENST00000583902 MED23Q9ULK4 1368 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 CDC45O75419 566 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 TIMM10P62072 90 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 ZSCAN25Q6NSZ9 544 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 ZNF804AQ7Z570 1209 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 VPS37DQ86XT2 251 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 MPNDQ8N594 471 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 ZGPATQ8N5A5 531 aaKnown RBP11.19□□□□□ -0.62
CASC3-209ENST00000583902 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 RUFY2Q8WXA3 655 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
CASC3-209ENST00000583902 PDGFDQ9GZP0 370 aaPredicted RBP11.19□□□□□ -0.62
CASC3-209ENST00000583902 DENND2AQ9ULE3 1009 aa11.19□□□□□ -0.62
CASC3-209ENST00000583902 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
CASC3-209ENST00000583902 ZFYP08048 801 aaPredicted RBP11.18□□□□□ -0.62
CASC3-209ENST00000583902 PTGER2P43116 358 aa11.18□□□□□ -0.62
CASC3-209ENST00000583902 CCDC102BQ68D86 513 aa11.18□□□□□ -0.62
CASC3-209ENST00000583902 PRPF40BQ6NWY9 871 aaKnown RBP11.18□□□□□ -0.62
CASC3-209ENST00000583902 FBXO33Q7Z6M2 555 aa11.18□□□□□ -0.62
CASC3-209ENST00000583902 UPF2Q9HAU5 1272 aaKnown RBP11.18□□□□□ -0.62
CASC3-209ENST00000583902 CREBZFQ9NS37 354 aa11.18□□□□□ -0.62
CASC3-209ENST00000583902 NSFL1CQ9UNZ2 370 aaKnown RBP11.18□□□□□ -0.62
CASC3-209ENST00000583902 BRCA1P38398 1863 aaKnown RBP11.18□□□□□ -0.62
CASC3-209ENST00000583902 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 MYH13Q9UKX3 1938 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 TRIM6-TRIM34B2RNG4 842 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 TAF5LO75529 589 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 HIBADHP31937 336 aaKnown RBP11.17□□□□□ -0.62
CASC3-209ENST00000583902 DPP8Q6V1X1 898 aaPredicted RBP11.17□□□□□ -0.62
CASC3-209ENST00000583902 OTUD7AQ8TE49 926 aaPredicted RBP11.17□□□□□ -0.62
CASC3-209ENST00000583902 PSMD1Q99460 953 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 BACH2Q9BYV9 841 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.17□□□□□ -0.621e-6■□□□□ 10.8
CASC3-209ENST00000583902 PAG1Q9NWQ8 432 aa11.17□□□□□ -0.62
CASC3-209ENST00000583902 SLX4Q8IY92 1834 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 RAD50Q92878 1312 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 MYH7P12883 1935 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 REC8O95072 547 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 GSPT1P15170 499 aaKnown RBP11.16□□□□□ -0.62
CASC3-209ENST00000583902 SDSP20132 328 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 CCDC93Q567U6 631 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 DALRD3Q5D0E6 543 aaKnown RBP11.16□□□□□ -0.62
CASC3-209ENST00000583902 KBTBD3Q8NAB2 608 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 C7orf43Q8WVR3 580 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 ZC3H12CQ9C0D7 883 aaKnown RBP11.16□□□□□ -0.62
CASC3-209ENST00000583902 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 SUGT1Q9Y2Z0 365 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
CASC3-209ENST00000583902 KIAA1551Q9HCM1 1747 aa11.15□□□□□ -0.62
CASC3-209ENST00000583902 SALL1Q9NSC2 1324 aa11.15□□□□□ -0.62
CASC3-209ENST00000583902 CACNA1SQ13698 1873 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms