RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
UBBP4-201ENST00000583708 ZNRF3Q9ULT6 936 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 EXOC6BQ9Y2D4 811 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 FPGT-TNNI3KV9GXZ4 949 aa11.45□□□□□ -0.58
UBBP4-201ENST00000583708 PDS5AQ29RF7 1337 aaKnown RBP11.44□□□□□ -0.58
UBBP4-201ENST00000583708 A0A1B0GUL7 405 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 FZD9O00144 591 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 UQCRFS1P1P0C7P4 283 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 IL1R1P14778 569 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 FKBP1AP62942 108 aaKnown RBP11.44□□□□□ -0.58
UBBP4-201ENST00000583708 IRX6P78412 446 aaPredicted RBP11.44□□□□□ -0.58
UBBP4-201ENST00000583708 TNIP1Q15025 636 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 GORABQ5T7V8 394 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 TMED8Q6PL24 325 aaPredicted RBP11.44□□□□□ -0.58
UBBP4-201ENST00000583708 OLFM4Q6UX06 510 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 CENPQQ7L2Z9 268 aaPredicted RBP11.44□□□□□ -0.58
UBBP4-201ENST00000583708 VPS37DQ86XT2 251 aa11.44□□□□□ -0.58
UBBP4-201ENST00000583708 FAM84BQ96KN1 310 aaPredicted RBP11.44□□□□□ -0.58
UBBP4-201ENST00000583708 IRS2Q9Y4H2 1338 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 FER1L6Q2WGJ9 1857 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 IFIT2P09913 472 aaKnown RBP11.43□□□□□ -0.58
UBBP4-201ENST00000583708 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
UBBP4-201ENST00000583708 DPY19L2Q6NUT2 758 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 TICAM2Q86XR7 235 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBBP4-201ENST00000583708 TBC1D22AQ8WUA7 517 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 GPATCH3Q96I76 525 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 CCDC136Q96JN2 1154 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 CD209Q9NNX6 404 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 ZNF277Q9NRM2 450 aaPredicted RBP11.43□□□□□ -0.58
UBBP4-201ENST00000583708 SUGT1Q9Y2Z0 365 aa11.43□□□□□ -0.58
UBBP4-201ENST00000583708 IGHDP01880 384 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 RPS12P25398 132 aaKnown RBP11.42□□□□□ -0.58
UBBP4-201ENST00000583708 TIMM10P62072 90 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 NUCB1Q02818 461 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 AOC3Q16853 763 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 STRIP1Q5VSL9 837 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 C9orf131Q5VYM1 1079 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
UBBP4-201ENST00000583708 XAGE2Q96GT9 111 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 NEUROD6Q96NK8 337 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 RNF181Q9P0P0 153 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 DENND2AQ9ULE3 1009 aa11.42□□□□□ -0.58
UBBP4-201ENST00000583708 FAM205AQ6ZU69 1335 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 MYO3BQ8WXR4 1341 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 TAF1P21675 1872 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 USP17L3A6NCW0 530 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 USP17L4A6NCW7 530 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 RIMBP2O15034 1052 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 ANKRD45Q5TZF3 282 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 USP17L1Q7RTZ2 530 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 AACSQ86V21 672 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 ZGPATQ8N5A5 531 aaKnown RBP11.41□□□□□ -0.58
UBBP4-201ENST00000583708 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 EAF2Q96CJ1 260 aaPredicted RBP11.41□□□□□ -0.58
UBBP4-201ENST00000583708 WWC3Q9ULE0 1092 aa11.41□□□□□ -0.58
UBBP4-201ENST00000583708 LTBP1Q14766 1721 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 TTC41PQ6P2S7 1318 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 ERC2O15083 957 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 ECE2O60344 883 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 FRAT2O75474 233 aaPredicted RBP11.4□□□□□ -0.58
UBBP4-201ENST00000583708 VIL1P09327 827 aaKnown RBP11.4□□□□□ -0.58
UBBP4-201ENST00000583708 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.58
UBBP4-201ENST00000583708 RASSF7Q02833 373 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 CCDC102BQ68D86 513 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 CIAPIN1Q6FI81 312 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 GPC2Q8N158 579 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 AGBL3Q8NEM8 1001 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 DPF2Q92785 391 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 MRIQ9BWK5 157 aa11.4□□□□□ -0.58
UBBP4-201ENST00000583708 ZNF609O15014 1411 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 ATP5JP18859 108 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 BCAMP50895 628 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
UBBP4-201ENST00000583708 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 IL1RAPL2Q9NP60 686 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 DUOX1Q9NRD9 1551 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 ECHDC1Q9NTX5 307 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 STAP2Q9UGK3 403 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 COL4A1P02462 1669 aa11.39□□□□□ -0.59
UBBP4-201ENST00000583708 GOLGB1Q14789 3259 aaKnown RBP11.39□□□□□ -0.59
UBBP4-201ENST00000583708 AOX1Q06278 1338 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 SALL1Q9NSC2 1324 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 GLTPD2A6NH11 291 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 SNAP23O00161 211 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 GYG1P46976 350 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 CXCL9Q07325 125 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 TTF1Q15361 905 aaPredicted RBP11.38□□□□□ -0.59
UBBP4-201ENST00000583708 DOK7Q18PE1 504 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 TTC39AQ5SRH9 613 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 TXNRD3Q86VQ6 643 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 DBNDD2Q9BQY9 259 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 OSBPL3Q9H4L5 887 aa11.38□□□□□ -0.59
UBBP4-201ENST00000583708 DBNLQ9UJU6 430 aaKnown RBP11.38□□□□□ -0.59
UBBP4-201ENST00000583708 GLRX3O76003 335 aaKnown RBP11.37□□□□□ -0.59
UBBP4-201ENST00000583708 PRELPP51888 382 aa11.37□□□□□ -0.59
UBBP4-201ENST00000583708 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
UBBP4-201ENST00000583708 LRRFIP1Q32MZ4 808 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms