RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 CCDC83Q8IWF9 413 aa10.78□□□□□ -0.68
SKA2-207ENST00000583380 LEO1Q8WVC0 666 aaPredicted RBP10.78□□□□□ -0.68
SKA2-207ENST00000583380 LZICQ8WZA0 190 aa10.78□□□□□ -0.68
SKA2-207ENST00000583380 XAGE2Q96GT9 111 aa10.78□□□□□ -0.68
SKA2-207ENST00000583380 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
SKA2-207ENST00000583380 PDE11AQ9HCR9 933 aa10.78□□□□□ -0.68
SKA2-207ENST00000583380 ZCCHC17Q9NP64 241 aaKnown RBP10.78□□□□□ -0.68
SKA2-207ENST00000583380 TRMT1Q9NXH9 659 aaKnown RBP10.78□□□□□ -0.68
SKA2-207ENST00000583380 ITGB1BP2Q9UKP3 347 aa10.78□□□□□ -0.68
SKA2-207ENST00000583380 AKAP2Q9Y2D5 859 aa10.78□□□□□ -0.68
SKA2-207ENST00000583380 FANCD2Q9BXW9 1451 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 TARSL2A2RTX5 802 aaKnown RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 GOLGA8KD6RF30 607 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 MEFVO15553 781 aaPredicted RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 STX10O60499 249 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 CHMLP26374 656 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 CCDC144BQ3MJ40 725 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 IQCEQ6IPM2 695 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 CCAR1Q8IX12 1150 aaKnown RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 CCDC144CPQ8IYA2 1237 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 ZFAND2BQ8WV99 257 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 ZKSCAN4Q969J2 545 aaPredicted RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 CCDC102AQ96A19 550 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 CCDC34Q96HJ3 373 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 NAA15Q9BXJ9 866 aaKnown RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 ALDH8A1Q9H2A2 487 aaPredicted RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 KLC4Q9NSK0 619 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 MTMR6Q9Y217 621 aa10.77□□□□□ -0.69
SKA2-207ENST00000583380 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
SKA2-207ENST00000583380 ERICH2A1L162 156 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 IKBKBO14920 756 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 NPHP1O15259 732 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 FESP07332 822 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 GNAI1P63096 354 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 CASP8Q14790 479 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 ZRSR2Q15696 482 aaKnown RBP10.76□□□□□ -0.69
SKA2-207ENST00000583380 RBM26Q5T8P6 1007 aaKnown RBP10.76□□□□□ -0.69
SKA2-207ENST00000583380 NAIF1Q69YI7 327 aaPredicted RBP10.76□□□□□ -0.69
SKA2-207ENST00000583380 CCDC73Q6ZRK6 1079 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 TSHZ1Q6ZSZ6 1077 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 RUFY2Q8WXA3 655 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 UPF3BQ9BZI7 483 aaKnown RBP10.76□□□□□ -0.69
SKA2-207ENST00000583380 FAM204AQ9H8W3 233 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 GDPD2Q9HCC8 539 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 DACT1Q9NYF0 836 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 CDC23Q9UJX2 597 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 FAN1Q9Y2M0 1017 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
SKA2-207ENST00000583380 NRXN1Q9ULB1 1477 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 GOLGA6L10A0A0M3HER8 536 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 USP27XA6NNY8 438 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 H3BQF6 201 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 SCP2P22307 547 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 GBP2P32456 591 aaPredicted RBP10.75□□□□□ -0.69
SKA2-207ENST00000583380 TMPOP42166 694 aaKnown RBP10.75□□□□□ -0.69
SKA2-207ENST00000583380 TBC1D8BQ0IIM8 1120 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 FOXD4L5Q5VV16 416 aaPredicted RBP10.75□□□□□ -0.69
SKA2-207ENST00000583380 KCNV1Q6PIU1 500 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 TRIM65Q6PJ69 517 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 TEX9Q8N6V9 391 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 GBP7Q8N8V2 638 aaPredicted RBP10.75□□□□□ -0.69
SKA2-207ENST00000583380 C1orf131Q8NDD1 294 aaKnown RBP10.75□□□□□ -0.69
SKA2-207ENST00000583380 CCDC148Q8NFR7 591 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 FOXD4L4Q8WXT5 416 aaPredicted RBP10.75□□□□□ -0.69
SKA2-207ENST00000583380 LRRCC1Q9C099 1032 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 STK26Q9P289 416 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 TNNQ9UQP3 1299 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 IQGAP3Q86VI3 1631 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 CEP152O94986 1710 aa10.75□□□□□ -0.69
SKA2-207ENST00000583380 MADDQ8WXG6 1647 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 PLEKHD1A6NEE1 506 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 H7C1W4 665 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 EIF3HO15372 352 aaKnown RBP eCLIP10.74□□□□□ -0.69
SKA2-207ENST00000583380 RTN3O95197 1032 aaPredicted RBP10.74□□□□□ -0.69
SKA2-207ENST00000583380 FERP16591 822 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 ATP5JP18859 108 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 PSMA5P28066 241 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 LIG3P49916 1009 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 DYNC1I2Q13409 638 aaKnown RBP10.74□□□□□ -0.69
SKA2-207ENST00000583380 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 STAP2Q9UGK3 403 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 CORO1CQ9ULV4 474 aaPredicted RBP10.74□□□□□ -0.69
SKA2-207ENST00000583380 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
SKA2-207ENST00000583380 NUB1Q9Y5A7 615 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 CAPN7Q9Y6W3 813 aa10.74□□□□□ -0.69
SKA2-207ENST00000583380 CTAGE15A4D2H0 777 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 KIF5CO60282 957 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 SEC31AO94979 1220 aaKnown RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 CTAGE8P0CG41 777 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 EPB41P11171 864 aaKnown RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 FNTAP49354 379 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 SKOR1P84550 965 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 DNM1Q05193 864 aaKnown RBP10.73□□□□□ -0.69
SKA2-207ENST00000583380 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 CCDC40Q4G0X9 1142 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 EMC10Q5UCC4 262 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 CTAGE6Q86UF2 777 aa10.73□□□□□ -0.69
SKA2-207ENST00000583380 CTAGE4Q8IX94 777 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms