RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 GREM2Q9H772 168 aa20.84■□□□□ 0.93
SREBF1-221ENST00000583080 UBE2Q2LH0YL09 131 aa20.83■□□□□ 0.93
SREBF1-221ENST00000583080 CALD1Q05682 793 aaKnown RBP20.83■□□□□ 0.93
SREBF1-221ENST00000583080 DACT2Q5SW24 774 aa20.83■□□□□ 0.93
SREBF1-221ENST00000583080 TTLL11Q8NHH1 800 aa20.83■□□□□ 0.93
SREBF1-221ENST00000583080 PRKRIP1Q9H875 184 aaPredicted RBP20.83■□□□□ 0.93
SREBF1-221ENST00000583080 MINPP1Q9UNW1 487 aa20.83■□□□□ 0.93
SREBF1-221ENST00000583080 CCDC30Q5VVM6 783 aa20.82■□□□□ 0.92
SREBF1-221ENST00000583080 FBXW7Q969H0 707 aa20.82■□□□□ 0.92
SREBF1-221ENST00000583080 PI4KAP2A4QPH2 592 aa20.81■□□□□ 0.92
SREBF1-221ENST00000583080 CWF19L2Q2TBE0 894 aaKnown RBP20.81■□□□□ 0.92
SREBF1-221ENST00000583080 KSR2Q6VAB6 950 aa20.81■□□□□ 0.92
SREBF1-221ENST00000583080 TXNRD3Q86VQ6 643 aa20.81■□□□□ 0.92
SREBF1-221ENST00000583080 REM2Q8IYK8 340 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-221ENST00000583080 PI4KAP1Q8N8J0 262 aa20.81■□□□□ 0.92
SREBF1-221ENST00000583080 BSDC1Q9NW68 430 aaPredicted RBP20.81■□□□□ 0.92
SREBF1-221ENST00000583080 SASH1O94885 1247 aa20.8■□□□□ 0.92
SREBF1-221ENST00000583080 KLRK1P26718 216 aa20.8■□□□□ 0.92
SREBF1-221ENST00000583080 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
SREBF1-221ENST00000583080 TSR2Q969E8 191 aaKnown RBP20.8■□□□□ 0.92
SREBF1-221ENST00000583080 WNT10BO00744 389 aa20.79■□□□□ 0.92
SREBF1-221ENST00000583080 TBC1D8O95759 1140 aa20.79■□□□□ 0.92
SREBF1-221ENST00000583080 MKRN3Q13064 507 aaKnown RBP20.79■□□□□ 0.92
SREBF1-221ENST00000583080 TTLL12Q14166 644 aaPredicted RBP20.79■□□□□ 0.92
SREBF1-221ENST00000583080 NEURL1BA8MQ27 555 aa20.78■□□□□ 0.92
SREBF1-221ENST00000583080 UBE3BQ7Z3V4 1068 aa20.78■□□□□ 0.92
SREBF1-221ENST00000583080 ZNF296Q8WUU4 475 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-221ENST00000583080 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
SREBF1-221ENST00000583080 STRIP1Q5VSL9 837 aa20.77■□□□□ 0.92
SREBF1-221ENST00000583080 G2E3Q7L622 706 aa20.77■□□□□ 0.92
SREBF1-221ENST00000583080 COA1Q9GZY4 146 aa20.77■□□□□ 0.92
SREBF1-221ENST00000583080 MYO3BQ8WXR4 1341 aa20.77■□□□□ 0.91
SREBF1-221ENST00000583080 NEXNQ0ZGT2 675 aa20.76■□□□□ 0.91
SREBF1-221ENST00000583080 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
SREBF1-221ENST00000583080 H7C1W4 665 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 IGHMBP2P38935 993 aaKnown RBP20.74■□□□□ 0.91
SREBF1-221ENST00000583080 PTPN12Q05209 780 aaKnown RBP20.74■□□□□ 0.91
SREBF1-221ENST00000583080 PRKG1Q13976 671 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 KIAA0825Q8IV33 1275 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 STK31Q9BXU1 1019 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 HDAC9Q9UKV0 1011 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 LEMD3Q9Y2U8 911 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 ZNF804BA4D1E1 1349 aa20.74■□□□□ 0.91
SREBF1-221ENST00000583080 ITGA6P23229 1130 aa20.73■□□□□ 0.91
SREBF1-221ENST00000583080 NF2P35240 595 aa20.73■□□□□ 0.91
SREBF1-221ENST00000583080 TM4SF4P48230 202 aa20.73■□□□□ 0.91
SREBF1-221ENST00000583080 ZBED3Q96IU2 234 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-221ENST00000583080 CHMP4AQ9BY43 222 aa20.73■□□□□ 0.91
SREBF1-221ENST00000583080 FZD1Q9UP38 647 aa20.73■□□□□ 0.91
SREBF1-221ENST00000583080 A0A1B0GUL6 1792 aa20.72■□□□□ 0.91
SREBF1-221ENST00000583080 GPR25O00155 361 aa20.72■□□□□ 0.91
SREBF1-221ENST00000583080 CASP7P55210 303 aa20.72■□□□□ 0.91
SREBF1-221ENST00000583080 TTLL5Q6EMB2 1281 aa20.72■□□□□ 0.91
SREBF1-221ENST00000583080 PLA2G12BQ9BX93 195 aa20.72■□□□□ 0.91
SREBF1-221ENST00000583080 R3HDMLQ9H3Y0 253 aa20.72■□□□□ 0.91
SREBF1-221ENST00000583080 GTF2IP78347 998 aa20.71■□□□□ 0.91
SREBF1-221ENST00000583080 GCKRQ14397 625 aa20.71■□□□□ 0.91
SREBF1-221ENST00000583080 TWISTNBQ3B726 338 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-221ENST00000583080 APOBEC3FQ8IUX4 373 aaKnown RBP20.71■□□□□ 0.91
SREBF1-221ENST00000583080 SSC5DA1L4H1 1573 aa20.71■□□□□ 0.91
SREBF1-221ENST00000583080 SNAP23O00161 211 aa20.7■□□□□ 0.9
SREBF1-221ENST00000583080 PKN2Q16513 984 aaKnown RBP20.7■□□□□ 0.9
SREBF1-221ENST00000583080 ANKRD2Q9GZV1 360 aa20.7■□□□□ 0.9
SREBF1-221ENST00000583080 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 CHRNDQ07001 517 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 SREBF2Q12772 1141 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 CCDC184Q52MB2 194 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 NOM1Q5C9Z4 860 aaKnown RBP20.69■□□□□ 0.9
SREBF1-221ENST00000583080 LDLRAD1Q5T700 205 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 ARMC9Q7Z3E5 817 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 CERS5Q8N5B7 392 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 MPHOSPH8Q99549 860 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 ANGEL1Q9UNK9 670 aaKnown RBP20.69■□□□□ 0.9
SREBF1-221ENST00000583080 PCDHAC2Q9Y5I4 1007 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 IRS2Q9Y4H2 1338 aa20.69■□□□□ 0.9
SREBF1-221ENST00000583080 COL1A1P02452 1464 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-221ENST00000583080 CSF1RP07333 972 aa20.68■□□□□ 0.9
SREBF1-221ENST00000583080 KCNJ4P48050 445 aa20.68■□□□□ 0.9
SREBF1-221ENST00000583080 FLIIQ13045 1269 aa20.68■□□□□ 0.9
SREBF1-221ENST00000583080 PRPF38BQ5VTL8 546 aaKnown RBP20.68■□□□□ 0.9
SREBF1-221ENST00000583080 SPRYD7Q5W111 196 aa20.68■□□□□ 0.9
SREBF1-221ENST00000583080 CD209Q9NNX6 404 aa20.68■□□□□ 0.9
SREBF1-221ENST00000583080 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
SREBF1-221ENST00000583080 MMP14P50281 582 aa20.67■□□□□ 0.9
SREBF1-221ENST00000583080 FBXO46Q6PJ61 603 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-221ENST00000583080 WWC1Q8IX03 1113 aa20.67■□□□□ 0.9
SREBF1-221ENST00000583080 CFHR5Q9BXR6 569 aa20.67■□□□□ 0.9
SREBF1-221ENST00000583080 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-221ENST00000583080 FKTNO75072 461 aa20.66■□□□□ 0.9
SREBF1-221ENST00000583080 TAF5LO75529 589 aa20.66■□□□□ 0.9
SREBF1-221ENST00000583080 DNAAF4Q8WXU2 420 aa20.66■□□□□ 0.9
SREBF1-221ENST00000583080 DEFB129Q9H1M3 183 aa20.66■□□□□ 0.9
SREBF1-221ENST00000583080 AOX1Q06278 1338 aa20.66■□□□□ 0.9
SREBF1-221ENST00000583080 LAMB1P07942 1786 aa20.65■□□□□ 0.9
SREBF1-221ENST00000583080 FKBP5Q13451 457 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-221ENST00000583080 DLGAP5Q15398 846 aa20.65■□□□□ 0.9
SREBF1-221ENST00000583080 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
SREBF1-221ENST00000583080 HELBQ8NG08 1087 aaPredicted RBP20.65■□□□□ 0.9
SREBF1-221ENST00000583080 CLMNQ96JQ2 1002 aa20.65■□□□□ 0.9
SREBF1-221ENST00000583080 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms