RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 EIF6P56537 245 aaKnown RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 MVPQ14764 893 aaKnown RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 NEUROD2Q15784 382 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 ZNF530Q6P9A1 599 aaPredicted RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 DZIP1LQ8IYY4 767 aaKnown RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 TRPM4Q8TD43 1214 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 ARHGAP45Q92619 1136 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 COL25A1Q9BXS0 654 aaPredicted RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 ADARB2Q9NS39 739 aaKnown RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 GPRC5DQ9NZD1 345 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 HDAC9Q9UKV0 1011 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 DDX19BQ9UMR2 479 aa8.28□□□□□ -1.08
NDEL1-216ENST00000583066 RRP7AQ9Y3A4 280 aaKnown RBP8.28□□□□□ -1.08
NDEL1-216ENST00000583066 GRXCR2A6NFK2 248 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 ARHGAP33O14559 1287 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 EIF5BO60841 1220 aaKnown RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 TBC1D8O95759 1140 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 HSP90AB1P08238 724 aaKnown RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 SLC10A3P09131 477 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 EN2P19622 333 aaPredicted RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 PSEN2P49810 448 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 RIPK4P57078 832 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 SLC39A6Q13433 755 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 HDAC1Q13547 482 aaPredicted RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 NFE2L2Q16236 605 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 USP48Q86UV5 1035 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 FTSJ3Q8IY81 847 aaKnown RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 RTKN2Q8IZC4 609 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 JDP2Q8WYK2 163 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 FRAT1Q92837 279 aaPredicted RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 RBM27Q9P2N5 1060 aaKnown RBP8.27□□□□□ -1.09
NDEL1-216ENST00000583066 PGAP2Q9UHJ9 254 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 LAMB4A4D0S4 1761 aa8.27□□□□□ -1.09
NDEL1-216ENST00000583066 NPR1P16066 1061 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 OSBPP22059 807 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 ZNF157P51786 506 aaPredicted RBP8.26□□□□□ -1.09
NDEL1-216ENST00000583066 EIF5P55010 431 aaKnown RBP8.26□□□□□ -1.09
NDEL1-216ENST00000583066 GNAI1P63096 354 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 ST5P78524 1137 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 NBR1Q14596 966 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 C8orf34Q49A92 452 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 ATF7IPQ6VMQ6 1270 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 PANK1Q8TE04 598 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 FBXW7Q969H0 707 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 UPF2Q9HAU5 1272 aaKnown RBP8.26□□□□□ -1.09
NDEL1-216ENST00000583066 SMC4Q9NTJ3 1288 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 IFT57Q9NWB7 429 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 TBC1D2BQ9UPU7 963 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 COG6Q9Y2V7 657 aa8.26□□□□□ -1.09
NDEL1-216ENST00000583066 NPHP1O15259 732 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 IL13P35225 146 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 GMPSP49915 693 aaPredicted RBP8.25□□□□□ -1.09
NDEL1-216ENST00000583066 DMRTA1Q5VZB9 504 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 PSMD1Q99460 953 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 R3HDMLQ9H3Y0 253 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 GBA2Q9HCG7 927 aaPredicted RBP8.25□□□□□ -1.09
NDEL1-216ENST00000583066 LAMA3Q16787 3333 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 MRC1P22897 1456 aa8.25□□□□□ -1.09
NDEL1-216ENST00000583066 TESPA1A2RU30 521 aaPredicted RBP8.24□□□□□ -1.09
NDEL1-216ENST00000583066 SOX1O00570 391 aaPredicted RBP8.24□□□□□ -1.09
NDEL1-216ENST00000583066 IGHDP01880 384 aa8.24□□□□□ -1.09
NDEL1-216ENST00000583066 EXOSC9Q06265 439 aaKnown RBP8.24□□□□□ -1.09
NDEL1-216ENST00000583066 EIF4A2Q14240 407 aaKnown RBP8.24□□□□□ -1.09
NDEL1-216ENST00000583066 CDC37L1Q7L3B6 337 aa8.24□□□□□ -1.09
NDEL1-216ENST00000583066 RASAL3Q86YV0 1011 aa8.24□□□□□ -1.09
NDEL1-216ENST00000583066 LARGE2Q8N3Y3 721 aa8.24□□□□□ -1.09
NDEL1-216ENST00000583066 ZNF330Q9Y3S2 320 aaPredicted RBP8.24□□□□□ -1.09
NDEL1-216ENST00000583066 KLRG2A4D1S0 409 aaPredicted RBP8.23□□□□□ -1.09
NDEL1-216ENST00000583066 ADM5C9JUS6 153 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 GPR25O00155 361 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 CAMTA2O94983 1202 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 PTPREP23469 700 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 PRKAR2BP31323 418 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 LSM11P83369 360 aaKnown RBP eCLIP8.23□□□□□ -1.09
NDEL1-216ENST00000583066 CXCL9Q07325 125 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 BECN1Q14457 450 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 C6orf132Q5T0Z8 1188 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 NPM2Q86SE8 214 aaKnown RBP8.23□□□□□ -1.09
NDEL1-216ENST00000583066 MPNDQ8N594 471 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 SSH1Q8WYL5 1049 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 KCNK17Q96T54 332 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 SPTBN5Q9NRC6 3674 aaKnown RBP8.23□□□□□ -1.09
NDEL1-216ENST00000583066 VCANP13611 3396 aa8.23□□□□□ -1.09
NDEL1-216ENST00000583066 EGFRP00533 1210 aa8.22□□□□□ -1.09
NDEL1-216ENST00000583066 ZNF853P0CG23 659 aa8.22□□□□□ -1.09
NDEL1-216ENST00000583066 TRIM27P14373 513 aa8.22□□□□□ -1.09
NDEL1-216ENST00000583066 PLEKHO1Q53GL0 409 aaPredicted RBP8.22□□□□□ -1.09
NDEL1-216ENST00000583066 AEBP1Q8IUX7 1158 aa8.22□□□□□ -1.09
NDEL1-216ENST00000583066 NIM1KQ8IY84 436 aa8.22□□□□□ -1.09
NDEL1-216ENST00000583066 LRCH3Q96II8 777 aa8.22□□□□□ -1.09
NDEL1-216ENST00000583066 KDM3BQ7LBC6 1761 aa8.21□□□□□ -1.1
NDEL1-216ENST00000583066 A0A087WZG4 1122 aa8.21□□□□□ -1.1
NDEL1-216ENST00000583066 RLBP1P12271 317 aa8.21□□□□□ -1.1
NDEL1-216ENST00000583066 COL9A1P20849 921 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms