RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 FOXD4L6Q3SYB3 417 aaPredicted RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 FOXD4L3Q6VB84 417 aaPredicted RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 UTP14AQ9BVJ6 771 aaKnown RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 COL15A1P39059 1388 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 PFKFB2O60825 505 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 ERLIN1O75477 346 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 CCDC148Q8NFR7 591 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 KIF18AQ8NI77 898 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 NAP1L4Q99733 375 aaKnown RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 TRIM34Q9BYJ4 488 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 IMPACTQ9P2X3 320 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 KDM4AO75164 1064 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 ADCY5O95622 1261 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 SERPINC1P01008 464 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 SOGA3Q5TF21 947 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 FSIP1Q8NA03 581 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 TNS3Q68CZ2 1445 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 BAG3O95817 575 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 PLCG2P16885 1265 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 CALML3P27482 149 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 XPCQ01831 940 aaPredicted RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 TFCP2Q12800 502 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 STK3Q13188 491 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 TRIM28Q13263 835 aaKnown RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 Q6ZUG5 572 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 FAM177A1Q8N128 213 aaPredicted RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 IQCDQ96DY2 449 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 CGNQ9P2M7 1197 aaKnown RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 ERVV-1B6SEH8 477 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 SEMA3EO15041 775 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 ZBTB43O43298 467 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 CREBRFQ8IUR6 639 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 CCAR1Q8IX12 1150 aaKnown RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 A0A1W2PQ27 194 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 A0A1W2PQ64 194 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 A0A1W2PQD8 194 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 UBE3CQ15386 1083 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 PUM3Q15397 648 aaKnown RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 CWF19L2Q2TBE0 894 aaKnown RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 OTUD7AQ8TE49 926 aaPredicted RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 GTF3C6Q969F1 213 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 CRNKL1Q9BZJ0 848 aaKnown RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 RAI14Q9P0K7 980 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 CEP170BQ9Y4F5 1589 aaPredicted RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 LPIN2Q92539 896 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 TMEM94Q12767 1356 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 IFIT3O14879 490 aaKnown RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 TAF3Q5VWG9 929 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 ZNF496Q96IT1 587 aaPredicted RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 CLIP2Q9UDT6 1046 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 HEG1Q9ULI3 1381 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 JAKMIP3Q5VZ66 844 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 FILIP1Q7Z7B0 1213 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 FAM114A1Q8IWE2 563 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 ZBTB3Q9H5J0 574 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 BMP2KQ9NSY1 1161 aaPredicted RBP6.76□□□□□ -1.33
RTTN-209ENST00000583043 DENND2AQ9ULE3 1009 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 CDHR2Q9BYE9 1310 aa6.76□□□□□ -1.33
RTTN-209ENST00000583043 RGL2O15211 777 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 AMPD3Q01432 767 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 PTPN14Q15678 1187 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 TMEM67Q5HYA8 995 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 PRC1O43663 620 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 PRIM1P49642 420 aaKnown RBP6.75□□□□□ -1.33
RTTN-209ENST00000583043 TYRO3Q06418 890 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 ORAI2Q96SN7 254 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 PPP1R1BQ9UD71 204 aaPredicted RBP6.75□□□□□ -1.33
RTTN-209ENST00000583043 UQCRHLA0A096LP55 91 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 KLF18A0A0U1RQI7 1052 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 SPTLC2O15270 562 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 PTCD1O75127 700 aaKnown RBP6.75□□□□□ -1.33
RTTN-209ENST00000583043 UQCRHP07919 91 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 EHBP1Q8NDI1 1231 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 CNPY2Q9Y2B0 182 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 THRAP3Q9Y2W1 955 aaKnown RBP6.75□□□□□ -1.33
RTTN-209ENST00000583043 PTPDC1A2A3K4 754 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 CCDC66A2RUB6 948 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 CDR1P51861 262 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 FAM193AP78312 1265 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 WTAPQ15007 396 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 TSPOAP1O95153 1857 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 H7C1W4 665 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
RTTN-209ENST00000583043 SEMA3FQ13275 785 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 ANKRD18AQ8IVF6 992 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 GLT8D2Q9H1C3 349 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 SPATA31A3Q5VYP0 1347 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 CPDO75976 1380 aa6.75□□□□□ -1.33
RTTN-209ENST00000583043 ZPR1O75312 459 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 CDC25BP30305 580 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 LZTS2Q9BRK4 669 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 STK24Q9Y6E0 443 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 C1orf167Q5SNV9 1468 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 IRS4O14654 1257 aaPredicted RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 ZMYM1Q5SVZ6 1142 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 MYO6Q9UM54 1294 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms