RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 MYH13Q9UKX3 1938 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 SBF1O95248 1867 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 IRS2Q9Y4H2 1338 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 IFIT2P09913 472 aaKnown RBP11.72□□□□□ -0.53
RFFL-210ENST00000582308 SLC5A1P13866 664 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 ATP2B4P23634 1241 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 KLRK1P26718 216 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 KCNJ4P48050 445 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 DPP8Q6V1X1 898 aaPredicted RBP11.72□□□□□ -0.53
RFFL-210ENST00000582308 XAGE2Q96GT9 111 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 DBNDD2Q9BQY9 259 aa11.72□□□□□ -0.53
RFFL-210ENST00000582308 RTFDC1Q9BY42 306 aaPredicted RBP11.72□□□□□ -0.53
RFFL-210ENST00000582308 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
RFFL-210ENST00000582308 IFIT1P09914 478 aaKnown RBP11.71□□□□□ -0.53
RFFL-210ENST00000582308 GRIPAP1Q4V328 841 aa11.71□□□□□ -0.53
RFFL-210ENST00000582308 SOGA3Q5TF21 947 aa11.71□□□□□ -0.53
RFFL-210ENST00000582308 C15orf52Q6ZUT6 534 aaKnown RBP11.71□□□□□ -0.53
RFFL-210ENST00000582308 TXNRD3Q86VQ6 643 aa11.71□□□□□ -0.53
RFFL-210ENST00000582308 PLEKHM2Q8IWE5 1019 aa11.71□□□□□ -0.53
RFFL-210ENST00000582308 RTKN2Q8IZC4 609 aa11.71□□□□□ -0.53
RFFL-210ENST00000582308 MYO5AQ9Y4I1 1855 aaKnown RBP11.7□□□□□ -0.54
RFFL-210ENST00000582308 YBX3P16989 372 aaKnown RBP eCLIP11.7□□□□□ -0.54
RFFL-210ENST00000582308 FBXO33Q7Z6M2 555 aa11.7□□□□□ -0.54
RFFL-210ENST00000582308 FAM84BQ96KN1 310 aaPredicted RBP11.7□□□□□ -0.54
RFFL-210ENST00000582308 STAP2Q9UGK3 403 aa11.7□□□□□ -0.54
RFFL-210ENST00000582308 AK9Q5TCS8 1911 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 DICER1Q9UPY3 1922 aaKnown RBP11.69□□□□□ -0.54
RFFL-210ENST00000582308 NFKBIEO00221 500 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 MX1P20591 662 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 PHKA1P46020 1223 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 GYG1P46976 350 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 BCAMP50895 628 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 PDE1AP54750 535 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 PSMD1Q99460 953 aa11.69□□□□□ -0.54
RFFL-210ENST00000582308 SCN9AQ15858 1988 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 RGS3P49796 1198 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
RFFL-210ENST00000582308 WASHC4Q2M389 1173 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 GORABQ5T7V8 394 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 CCDC102BQ68D86 513 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 SUPT20HQ8NEM7 779 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 ZNF277Q9NRM2 450 aaPredicted RBP11.68□□□□□ -0.54
RFFL-210ENST00000582308 ECHDC1Q9NTX5 307 aa11.68□□□□□ -0.54
RFFL-210ENST00000582308 HIBADHP31937 336 aaKnown RBP11.67□□□□□ -0.54
RFFL-210ENST00000582308 PRELPP51888 382 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 PELP1Q8IZL8 1130 aaKnown RBP11.67□□□□□ -0.54
RFFL-210ENST00000582308 PI4K2BQ8TCG2 481 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 EYA3Q99504 573 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 ZC3H12CQ9C0D7 883 aaKnown RBP11.67□□□□□ -0.54
RFFL-210ENST00000582308 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 OSBPL3Q9H4L5 887 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 PSME4Q14997 1843 aa11.67□□□□□ -0.54
RFFL-210ENST00000582308 TTC41PQ6P2S7 1318 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 COL4A5P29400 1685 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 ZNF646O15015 1829 aaPredicted RBP11.66□□□□□ -0.54
RFFL-210ENST00000582308 ATP5JP18859 108 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 ARID4AP29374 1257 aaPredicted RBP11.66□□□□□ -0.54
RFFL-210ENST00000582308 RASSF7Q02833 373 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 KIAA2012Q0VF49 1180 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 SCARF1Q14162 830 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 AOC3Q16853 763 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 DOK7Q18PE1 504 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 CAVIN4Q5BKX8 364 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 CCDC158Q5M9N0 1113 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
RFFL-210ENST00000582308 ZNF512BQ96KM6 892 aaPredicted RBP11.66□□□□□ -0.54
RFFL-210ENST00000582308 AOX1Q06278 1338 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 MYH7P12883 1935 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 PPIP5K2O43314 1243 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 IL1R1P14778 569 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 IARSP41252 1262 aaKnown RBP11.65□□□□□ -0.54
RFFL-210ENST00000582308 MCAMP43121 646 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 ZNF804AQ7Z570 1209 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 TDRD7Q8NHU6 1098 aaKnown RBP11.65□□□□□ -0.54
RFFL-210ENST00000582308 VPS33BQ9H267 617 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 BOLA2Q9H3K6 86 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 CD209Q9NNX6 404 aa11.65□□□□□ -0.54
RFFL-210ENST00000582308 IQSEC3Q9UPP2 1182 aaPredicted RBP11.65□□□□□ -0.54
RFFL-210ENST00000582308 COL1A1P02452 1464 aaPredicted RBP11.64□□□□□ -0.55
RFFL-210ENST00000582308 GLRX3O76003 335 aaKnown RBP11.64□□□□□ -0.55
RFFL-210ENST00000582308 RASGRF1Q13972 1273 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 GPR162Q16538 588 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 TTC22Q5TAA0 569 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 LARGE2Q8N3Y3 721 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.64□□□□□ -0.55
RFFL-210ENST00000582308 HAUS7Q99871 368 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 COA1Q9GZY4 146 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 DBNDD1Q9H9R9 158 aa11.64□□□□□ -0.55
RFFL-210ENST00000582308 SNRKQ9NRH2 765 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms