RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 MYL6BP14649 208 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 FXR1P51114 621 aaKnown RBP eCLIP8.25□□□□□ -1.09
TVP23B-210ENST00000582288 ZNF280AP59817 542 aaPredicted RBP8.25□□□□□ -1.09
TVP23B-210ENST00000582288 SREBF2Q12772 1141 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 DCTN1Q14203 1278 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 LRP10Q7Z4F1 713 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 GGA3Q9NZ52 723 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 HCSTQ9UBK5 93 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 SH3TC1Q8TE82 1336 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 LAMB2P55268 1798 aa8.25□□□□□ -1.09
TVP23B-210ENST00000582288 RTL9Q8NET4 1388 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 FKTNO75072 461 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 TBC1D8O95759 1140 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 ALDH1A1P00352 501 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 NLRP10Q86W26 655 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 AGBL3Q8NEM8 1001 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
TVP23B-210ENST00000582288 CENPFP49454 3210 aa8.24□□□□□ -1.09
TVP23B-210ENST00000582288 RBBP6Q7Z6E9 1792 aaKnown RBP8.24□□□□□ -1.09
TVP23B-210ENST00000582288 ECE2O60344 883 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 U2AF1L5P0DN76 240 aaPredicted RBP8.23□□□□□ -1.09
TVP23B-210ENST00000582288 MMP14P50281 582 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 INHBEP58166 350 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 U2AF1Q01081 240 aaKnown RBP eCLIP8.23□□□□□ -1.09
TVP23B-210ENST00000582288 TCIRG1Q13488 830 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 PDIA6Q15084 440 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 SF3B3Q15393 1217 aaKnown RBP8.23□□□□□ -1.09
TVP23B-210ENST00000582288 RBM26Q5T8P6 1007 aaKnown RBP8.23□□□□□ -1.09
TVP23B-210ENST00000582288 DBNDD1Q9H9R9 158 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 BABAM1Q9NWV8 329 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 MIS18AQ9NYP9 233 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 BRCA2P51587 3418 aa8.23□□□□□ -1.09
TVP23B-210ENST00000582288 POLR2AP24928 1970 aaKnown RBP8.22□□□□□ -1.09
TVP23B-210ENST00000582288 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
TVP23B-210ENST00000582288 NEFMP07197 916 aa8.22□□□□□ -1.09
TVP23B-210ENST00000582288 HCLS1P14317 486 aaPredicted RBP8.22□□□□□ -1.09
TVP23B-210ENST00000582288 SCARF1Q14162 830 aa8.22□□□□□ -1.09
TVP23B-210ENST00000582288 ANGEL2Q5VTE6 544 aaKnown RBP8.22□□□□□ -1.09
TVP23B-210ENST00000582288 TBC1D16Q8TBP0 767 aa8.22□□□□□ -1.09
TVP23B-210ENST00000582288 ZC3H12CQ9C0D7 883 aaKnown RBP8.22□□□□□ -1.09
TVP23B-210ENST00000582288 POLLQ9UGP5 575 aa8.22□□□□□ -1.09
TVP23B-210ENST00000582288 TRMT112Q9UI30 125 aaKnown RBP8.22□□□□□ -1.09
TVP23B-210ENST00000582288 GPSM2P81274 684 aa8.21□□□□□ -1.1
TVP23B-210ENST00000582288 RSBN1LQ6PCB5 846 aaPredicted RBP8.21□□□□□ -1.1
TVP23B-210ENST00000582288 ARMC5Q96C12 935 aa8.21□□□□□ -1.1
TVP23B-210ENST00000582288 GMLQ99445 158 aa8.21□□□□□ -1.1
TVP23B-210ENST00000582288 MYOZ2Q9NPC6 264 aa8.21□□□□□ -1.1
TVP23B-210ENST00000582288 KCNQ5Q9NR82 932 aa8.21□□□□□ -1.1
TVP23B-210ENST00000582288 UNCXA6NJT0 531 aa8.2□□□□□ -1.1
TVP23B-210ENST00000582288 UBE2Q2LH0YL09 131 aa8.2□□□□□ -1.1
TVP23B-210ENST00000582288 USP17L8P0C7I0 530 aa8.2□□□□□ -1.1
TVP23B-210ENST00000582288 HSP90B1P14625 803 aaKnown RBP8.2□□□□□ -1.1
TVP23B-210ENST00000582288 NF2P35240 595 aa8.2□□□□□ -1.1
TVP23B-210ENST00000582288 PSEN1P49768 467 aa8.2□□□□□ -1.1
TVP23B-210ENST00000582288 RPS8P62241 208 aaKnown RBP8.2□□□□□ -1.1
TVP23B-210ENST00000582288 LSM11P83369 360 aaKnown RBP eCLIP8.2□□□□□ -1.1
TVP23B-210ENST00000582288 CELF1Q92879 486 aaKnown RBP8.2□□□□□ -1.1
TVP23B-210ENST00000582288 ASTN2O75129 1339 aaPredicted RBP8.2□□□□□ -1.1
TVP23B-210ENST00000582288 MANSC4A6NHS7 340 aaPredicted RBP8.19□□□□□ -1.1
TVP23B-210ENST00000582288 TRIM26Q12899 539 aaPredicted RBP8.19□□□□□ -1.1
TVP23B-210ENST00000582288 LDLRAD1Q5T700 205 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 COPS6Q7L5N1 327 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 OTOP1Q7RTM1 612 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 ARMC9Q7Z3E5 817 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 PODNQ7Z5L7 613 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 ERO1AQ96HE7 468 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 PNNQ9H307 717 aaKnown RBP8.19□□□□□ -1.1
TVP23B-210ENST00000582288 PTPN22Q9Y2R2 807 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 LAMB1P07942 1786 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 PSME4Q14997 1843 aa8.19□□□□□ -1.1
TVP23B-210ENST00000582288 USP17L3A6NCW0 530 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 USP17L4A6NCW7 530 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 ZBTB48P10074 688 aaPredicted RBP8.18□□□□□ -1.1
TVP23B-210ENST00000582288 PPP2R1AP30153 589 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 TRIM28Q13263 835 aaKnown RBP8.18□□□□□ -1.1
TVP23B-210ENST00000582288 NFE2L2Q16236 605 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 USP17L1Q7RTZ2 530 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 PLEKHF1Q96S99 279 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 THUMPD2Q9BTF0 503 aaKnown RBP8.18□□□□□ -1.1
TVP23B-210ENST00000582288 GGA1Q9UJY5 639 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 TRIM17Q9Y577 477 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 MYO3BQ8WXR4 1341 aa8.18□□□□□ -1.1
TVP23B-210ENST00000582288 COL1A1P02452 1464 aaPredicted RBP8.18□□□□□ -1.1
TVP23B-210ENST00000582288 DLG5Q8TDM6 1919 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 SCN9AQ15858 1988 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 SZT2Q5T011 3432 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 UFL1O94874 794 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 TTLL12Q14166 644 aaPredicted RBP8.17□□□□□ -1.1
TVP23B-210ENST00000582288 MAP3K11Q16584 847 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 PROSER3Q2NL68 480 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 GPR153Q6NV75 609 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 MOB2Q70IA6 237 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 OGFOD1Q8N543 542 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 PLBD2Q8NHP8 589 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 XAGE3Q8WTP9 111 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 ISCA1Q9BUE6 129 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 R3HDMLQ9H3Y0 253 aa8.17□□□□□ -1.1
TVP23B-210ENST00000582288 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms