RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 MROH5Q6ZUA9 1318 aa25.8■■□□□ 1.72
PPP4R1-221ENST00000582240 FBXW7Q969H0 707 aa25.79■■□□□ 1.72
PPP4R1-221ENST00000582240 EPHX2P34913 555 aa25.78■■□□□ 1.72
PPP4R1-221ENST00000582240 MVPQ14764 893 aaKnown RBP25.78■■□□□ 1.72
PPP4R1-221ENST00000582240 EAPPQ56P03 285 aaPredicted RBP25.78■■□□□ 1.72
PPP4R1-221ENST00000582240 MXD3Q9BW11 206 aa25.78■■□□□ 1.72
PPP4R1-221ENST00000582240 IQCA1LA6NCM1 817 aa25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 LMOD1P29536 600 aaPredicted RBP25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 MTX1Q13505 466 aa25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 UBE4AQ14139 1066 aa25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 VGLL2Q8N8G2 317 aa25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 COA1Q9GZY4 146 aa25.77■■□□□ 1.72
PPP4R1-221ENST00000582240 PDE8BO95263 885 aa25.76■■□□□ 1.71
PPP4R1-221ENST00000582240 GYG1P46976 350 aa25.76■■□□□ 1.71
PPP4R1-221ENST00000582240 PODNQ7Z5L7 613 aa25.76■■□□□ 1.71
PPP4R1-221ENST00000582240 CD209Q9NNX6 404 aa25.76■■□□□ 1.71
PPP4R1-221ENST00000582240 COPRSQ9NQ92 184 aa25.76■■□□□ 1.71
PPP4R1-221ENST00000582240 GPRC5DQ9NZD1 345 aa25.76■■□□□ 1.71
PPP4R1-221ENST00000582240 A0A1B0GUL6 1792 aa25.75■■□□□ 1.71
PPP4R1-221ENST00000582240 VIL1P09327 827 aaKnown RBP25.75■■□□□ 1.71
PPP4R1-221ENST00000582240 ATP8B2P98198 1209 aa25.75■■□□□ 1.71
PPP4R1-221ENST00000582240 C15orf52Q6ZUT6 534 aaKnown RBP25.75■■□□□ 1.71
PPP4R1-221ENST00000582240 RBM46Q8TBY0 533 aaKnown RBP25.75■■□□□ 1.71
PPP4R1-221ENST00000582240 USP17L3A6NCW0 530 aa25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 USP17L4A6NCW7 530 aa25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 USP17L1Q7RTZ2 530 aa25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 CNOT7Q9UIV1 285 aaKnown RBP25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 JAG2Q9Y219 1238 aa25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 CLEC11AQ9Y240 323 aa25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 SCN9AQ15858 1988 aa25.74■■□□□ 1.71
PPP4R1-221ENST00000582240 CIAO1O76071 339 aa25.73■■□□□ 1.71
PPP4R1-221ENST00000582240 FAM84BQ96KN1 310 aaPredicted RBP25.73■■□□□ 1.71
PPP4R1-221ENST00000582240 GTF2IP78347 998 aa25.72■■□□□ 1.71
PPP4R1-221ENST00000582240 PDE3AQ14432 1141 aa25.72■■□□□ 1.71
PPP4R1-221ENST00000582240 RSBN1LQ6PCB5 846 aaPredicted RBP25.72■■□□□ 1.71
PPP4R1-221ENST00000582240 ZNF804AQ7Z570 1209 aa25.72■■□□□ 1.71
PPP4R1-221ENST00000582240 MICALL2Q8IY33 904 aa25.72■■□□□ 1.71
PPP4R1-221ENST00000582240 CEP126Q9P2H0 1117 aa25.72■■□□□ 1.71
PPP4R1-221ENST00000582240 FGFR2P21802 821 aa25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 IL15P40933 162 aaPredicted RBP25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 POLA2Q14181 598 aa25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 RBM26Q5T8P6 1007 aaKnown RBP25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 DDX19BQ9UMR2 479 aa25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 IQSEC3Q9UPP2 1182 aaPredicted RBP25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.71■■□□□ 1.71
PPP4R1-221ENST00000582240 HIBADHP31937 336 aaKnown RBP25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 RRP1P56182 461 aaKnown RBP25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 DACT2Q5SW24 774 aa25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 TTLL5Q6EMB2 1281 aa25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 CEP85Q6P2H3 762 aa25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 SAMD7Q7Z3H4 446 aa25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 TRPM4Q8TD43 1214 aa25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 FBXO3Q9UK99 471 aa25.7■■□□□ 1.7
PPP4R1-221ENST00000582240 BCAMP50895 628 aa25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 TFCP2Q12800 502 aa25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 PUM3Q15397 648 aaKnown RBP25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 SMC1BQ8NDV3 1235 aa25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 SSH3Q8TE77 659 aa25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 DPF2Q92785 391 aa25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 ADARB2Q9NS39 739 aaKnown RBP25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 ZBTB40Q9NUA8 1239 aa25.69■■□□□ 1.7
PPP4R1-221ENST00000582240 SCN4AP35499 1836 aa25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 H7C1D1 291 aa25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 EGFRP00533 1210 aa25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 IL1R1P14778 569 aa25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 HIRAP54198 1017 aaPredicted RBP25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 G3BP1Q13283 466 aaKnown RBP eCLIP25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 TBC1D10BQ4KMP7 808 aaPredicted RBP25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 CHADLQ6NUI6 762 aa25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 FBXO33Q7Z6M2 555 aa25.68■■□□□ 1.7
PPP4R1-221ENST00000582240 IFIT1P09914 478 aaKnown RBP25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 RPS12P25398 132 aaKnown RBP25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 ATP2B3Q16720 1220 aa25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 STRIP1Q5VSL9 837 aa25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 PNMA8AQ86V59 439 aaPredicted RBP25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 LDHDQ86WU2 507 aa25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 GMLQ99445 158 aa25.67■■□□□ 1.7
PPP4R1-221ENST00000582240 SLC5A1P13866 664 aa25.66■■□□□ 1.7
PPP4R1-221ENST00000582240 MAP1SQ66K74 1059 aaPredicted RBP25.66■■□□□ 1.7
PPP4R1-221ENST00000582240 TDRD7Q8NHU6 1098 aaKnown RBP25.66■■□□□ 1.7
PPP4R1-221ENST00000582240 LPIN2Q92539 896 aa25.66■■□□□ 1.7
PPP4R1-221ENST00000582240 SURF6O75683 361 aaKnown RBP25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 ADORA1P30542 326 aa25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 TIMM10P62072 90 aa25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 FSTL1Q12841 308 aa25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 USP50Q70EL3 339 aaPredicted RBP25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 VPS37DQ86XT2 251 aa25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 CERS5Q8N5B7 392 aa25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 AGBL3Q8NEM8 1001 aa25.65■■□□□ 1.7
PPP4R1-221ENST00000582240 SASH1O94885 1247 aa25.64■■□□□ 1.7
PPP4R1-221ENST00000582240 CHAF1AQ13111 956 aaPredicted RBP25.64■■□□□ 1.7
PPP4R1-221ENST00000582240 CAVIN4Q5BKX8 364 aa25.64■■□□□ 1.7
PPP4R1-221ENST00000582240 OS9Q13438 667 aaPredicted RBP25.63■■□□□ 1.69
PPP4R1-221ENST00000582240 F8W031 263 aaPredicted RBP25.62■■□□□ 1.69
PPP4R1-221ENST00000582240 USP17L8P0C7I0 530 aa25.62■■□□□ 1.69
PPP4R1-221ENST00000582240 KIAA0825Q8IV33 1275 aa25.62■■□□□ 1.69
PPP4R1-221ENST00000582240 SIRT2Q8IXJ6 389 aa25.62■■□□□ 1.69
PPP4R1-221ENST00000582240 FMR1Q06787 632 aaKnown RBP eCLIP25.61■■□□□ 1.692e-6■■■■□ 20.3
PPP4R1-221ENST00000582240 NEUROD6Q96NK8 337 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms