RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 ERC1Q8IUD2 1116 aa18.67■□□□□ 0.58
MKS1-210ENST00000581180 LARGE2Q8N3Y3 721 aa18.67■□□□□ 0.58
MKS1-210ENST00000581180 GPR108Q9NPR9 543 aa18.67■□□□□ 0.58
MKS1-210ENST00000581180 RNF181Q9P0P0 153 aa18.67■□□□□ 0.58
MKS1-210ENST00000581180 MYH13Q9UKX3 1938 aa18.66■□□□□ 0.58
MKS1-210ENST00000581180 ZNF609O15014 1411 aa18.66■□□□□ 0.58
MKS1-210ENST00000581180 ZNF646O15015 1829 aaPredicted RBP18.66■□□□□ 0.58
MKS1-210ENST00000581180 NEFLP07196 543 aa18.66■□□□□ 0.58
MKS1-210ENST00000581180 ATP2B3Q16720 1220 aa18.66■□□□□ 0.58
MKS1-210ENST00000581180 RHPN1Q8TCX5 695 aa18.66■□□□□ 0.58
MKS1-210ENST00000581180 LPIN2Q92539 896 aa18.66■□□□□ 0.58
MKS1-210ENST00000581180 IGHDP01880 384 aa18.65■□□□□ 0.58
MKS1-210ENST00000581180 KIF1BPQ96EK5 621 aa18.65■□□□□ 0.58
MKS1-210ENST00000581180 AKAP2Q9Y2D5 859 aa18.65■□□□□ 0.58
MKS1-210ENST00000581180 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
MKS1-210ENST00000581180 SLC5A1P13866 664 aa18.64■□□□□ 0.57
MKS1-210ENST00000581180 TIMM10P62072 90 aa18.64■□□□□ 0.57
MKS1-210ENST00000581180 TNNI3KQ59H18 835 aa18.64■□□□□ 0.57
MKS1-210ENST00000581180 FAM84BQ96KN1 310 aaPredicted RBP18.64■□□□□ 0.57
MKS1-210ENST00000581180 RWDD1Q9H446 243 aaPredicted RBP18.64■□□□□ 0.57
MKS1-210ENST00000581180 FPGT-TNNI3KV9GXZ4 949 aa18.64■□□□□ 0.57
MKS1-210ENST00000581180 A0A1B0GUL7 405 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 FZD9O00144 591 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 DOK7Q18PE1 504 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 FBXO33Q7Z6M2 555 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 NIM1KQ8IY84 436 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 JDP2Q8WYK2 163 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 DBNDD1Q9H9R9 158 aa18.63■□□□□ 0.57
MKS1-210ENST00000581180 ZC3H4Q9UPT8 1303 aaKnown RBP18.63■□□□□ 0.57
MKS1-210ENST00000581180 YDJCA8MPS7 323 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 APBB1O00213 710 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 ECE2O60344 883 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 ADORA1P30542 326 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 GYG1P46976 350 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 SMC5Q8IY18 1101 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 EAF2Q96CJ1 260 aaPredicted RBP18.62■□□□□ 0.57
MKS1-210ENST00000581180 GCC1Q96CN9 775 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 COA1Q9GZY4 146 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 AKAP11Q9UKA4 1901 aa18.62■□□□□ 0.57
MKS1-210ENST00000581180 XAGE2Q96GT9 111 aa18.61■□□□□ 0.57
MKS1-210ENST00000581180 LRRCC1Q9C099 1032 aa18.61■□□□□ 0.57
MKS1-210ENST00000581180 CD209Q9NNX6 404 aa18.61■□□□□ 0.57
MKS1-210ENST00000581180 IL1RAPL2Q9NP60 686 aa18.61■□□□□ 0.57
MKS1-210ENST00000581180 IL1R1P14778 569 aa18.6■□□□□ 0.57
MKS1-210ENST00000581180 HIBADHP31937 336 aaKnown RBP18.6■□□□□ 0.57
MKS1-210ENST00000581180 BCAMP50895 628 aa18.6■□□□□ 0.57
MKS1-210ENST00000581180 ZNF804AQ7Z570 1209 aa18.6■□□□□ 0.57
MKS1-210ENST00000581180 PODNQ7Z5L7 613 aa18.6■□□□□ 0.57
MKS1-210ENST00000581180 ZBTB22O15209 634 aa18.59■□□□□ 0.57
MKS1-210ENST00000581180 SMARCA5O60264 1052 aaPredicted RBP18.59■□□□□ 0.57
MKS1-210ENST00000581180 CAVIN4Q5BKX8 364 aa18.59■□□□□ 0.57
MKS1-210ENST00000581180 ERICH6BQ5W0A0 696 aa18.59■□□□□ 0.57
MKS1-210ENST00000581180 CLASRPQ8N2M8 674 aaKnown RBP18.59■□□□□ 0.57
MKS1-210ENST00000581180 TDRD7Q8NHU6 1098 aaKnown RBP18.59■□□□□ 0.57
MKS1-210ENST00000581180 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
MKS1-210ENST00000581180 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
MKS1-210ENST00000581180 KCNQ5Q9NR82 932 aa18.59■□□□□ 0.57
MKS1-210ENST00000581180 ZNF541Q9H0D2 1346 aa18.58■□□□□ 0.57
MKS1-210ENST00000581180 G3V3G9 751 aa18.58■□□□□ 0.56
MKS1-210ENST00000581180 CXCL9Q07325 125 aa18.58■□□□□ 0.56
MKS1-210ENST00000581180 DCAF8Q5TAQ9 597 aa18.58■□□□□ 0.56
MKS1-210ENST00000581180 AACSQ86V21 672 aa18.58■□□□□ 0.56
MKS1-210ENST00000581180 CCDC8Q9H0W5 538 aaPredicted RBP18.58■□□□□ 0.56
MKS1-210ENST00000581180 DBNLQ9UJU6 430 aaKnown RBP18.58■□□□□ 0.56
MKS1-210ENST00000581180 PHKA1P46020 1223 aa18.57■□□□□ 0.56
MKS1-210ENST00000581180 EIF6P56537 245 aaKnown RBP18.57■□□□□ 0.56
MKS1-210ENST00000581180 CCDC102BQ68D86 513 aa18.57■□□□□ 0.56
MKS1-210ENST00000581180 TLR7Q9NYK1 1049 aaKnown RBP18.57■□□□□ 0.56
MKS1-210ENST00000581180 VPS37DQ86XT2 251 aa18.56■□□□□ 0.56
MKS1-210ENST00000581180 RAD17O75943 681 aa18.55■□□□□ 0.56
MKS1-210ENST00000581180 ANKRD45Q5TZF3 282 aa18.55■□□□□ 0.56
MKS1-210ENST00000581180 CIAPIN1Q6FI81 312 aa18.55■□□□□ 0.56
MKS1-210ENST00000581180 MYO5AQ9Y4I1 1855 aaKnown RBP18.54■□□□□ 0.56
MKS1-210ENST00000581180 FAM205AQ6ZU69 1335 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 KDM2BQ8NHM5 1336 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 COL1A1P02452 1464 aaPredicted RBP18.54■□□□□ 0.56
MKS1-210ENST00000581180 USP17L3A6NCW0 530 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 USP17L4A6NCW7 530 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 GLTPD2A6NH11 291 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 PSMD14O00487 310 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 VIL1P09327 827 aaKnown RBP18.54■□□□□ 0.56
MKS1-210ENST00000581180 ARID4AP29374 1257 aaPredicted RBP18.54■□□□□ 0.56
MKS1-210ENST00000581180 STRIP1Q5VSL9 837 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 USP17L1Q7RTZ2 530 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 IQSEC3Q9UPP2 1182 aaPredicted RBP18.54■□□□□ 0.56
MKS1-210ENST00000581180 WDR90Q96KV7 1748 aa18.54■□□□□ 0.56
MKS1-210ENST00000581180 IFIT2P09913 472 aaKnown RBP18.53■□□□□ 0.56
MKS1-210ENST00000581180 GTF2IP78347 998 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 TNIP1Q15025 636 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 DACT2Q5SW24 774 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 GORABQ5T7V8 394 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 TTLL5Q6EMB2 1281 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 GPC2Q8N158 579 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 ZNF512BQ96KM6 892 aaPredicted RBP18.53■□□□□ 0.56
MKS1-210ENST00000581180 GNL3LQ9NVN8 582 aaKnown RBP18.53■□□□□ 0.56
MKS1-210ENST00000581180 SCN4AP35499 1836 aa18.53■□□□□ 0.56
MKS1-210ENST00000581180 SEMA3EO15041 775 aa18.52■□□□□ 0.56
MKS1-210ENST00000581180 DDNO94850 711 aaPredicted RBP18.52■□□□□ 0.56
MKS1-210ENST00000581180 NUCB1Q02818 461 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms