RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 MYBBP1AQ9BQG0 1328 aaKnown RBP12.82□□□□□ -0.36
RFFL-208ENST00000581039 PAPPA2Q9BXP8 1791 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 WTIPA6NIX2 430 aaPredicted RBP12.81□□□□□ -0.36
RFFL-208ENST00000581039 WNT10BO00744 389 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 ZNF853P0CG23 659 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 MMP14P50281 582 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 STRIP1Q5VSL9 837 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 FBXO46Q6PJ61 603 aaPredicted RBP12.81□□□□□ -0.36
RFFL-208ENST00000581039 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 MXD3Q9BW11 206 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 BSDC1Q9NW68 430 aaPredicted RBP12.81□□□□□ -0.36
RFFL-208ENST00000581039 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
RFFL-208ENST00000581039 FKTNO75072 461 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 CCT4P50991 539 aaKnown RBP12.8□□□□□ -0.36
RFFL-208ENST00000581039 CTSWP56202 376 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 GNAI1P63096 354 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
RFFL-208ENST00000581039 CALD1Q05682 793 aaKnown RBP12.8□□□□□ -0.36
RFFL-208ENST00000581039 PRKG1Q13976 671 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 COA1Q9GZY4 146 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 IFT57Q9NWB7 429 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 MED23Q9ULK4 1368 aa12.8□□□□□ -0.36
RFFL-208ENST00000581039 SASH1O94885 1247 aa12.79□□□□□ -0.36
RFFL-208ENST00000581039 ALDH1A1P00352 501 aa12.79□□□□□ -0.36
RFFL-208ENST00000581039 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
RFFL-208ENST00000581039 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
RFFL-208ENST00000581039 TTLL11Q8NHH1 800 aa12.79□□□□□ -0.36
RFFL-208ENST00000581039 MAP3K2Q9Y2U5 619 aa12.79□□□□□ -0.36
RFFL-208ENST00000581039 NEXNQ0ZGT2 675 aa12.78□□□□□ -0.36
RFFL-208ENST00000581039 KSR2Q6VAB6 950 aa12.78□□□□□ -0.36
RFFL-208ENST00000581039 APOBEC3FQ8IUX4 373 aaKnown RBP12.78□□□□□ -0.36
RFFL-208ENST00000581039 C8orf58Q8NAV2 365 aa12.78□□□□□ -0.36
RFFL-208ENST00000581039 CFHR5Q9BXR6 569 aa12.78□□□□□ -0.36
RFFL-208ENST00000581039 GREM2Q9H772 168 aa12.78□□□□□ -0.36
RFFL-208ENST00000581039 ANGEL1Q9UNK9 670 aaKnown RBP12.78□□□□□ -0.36
RFFL-208ENST00000581039 LEMD3Q9Y2U8 911 aa12.78□□□□□ -0.36
RFFL-208ENST00000581039 PI4KAP2A4QPH2 592 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 IGHMBP2P38935 993 aaKnown RBP12.77□□□□□ -0.37
RFFL-208ENST00000581039 INHBEP58166 350 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 DDX10Q13206 875 aaKnown RBP12.77□□□□□ -0.37
RFFL-208ENST00000581039 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 SPRYD7Q5W111 196 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 TXNRD3Q86VQ6 643 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 KIAA0825Q8IV33 1275 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 PI4KAP1Q8N8J0 262 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 SLC10A4Q96EP9 437 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 ANKRD2Q9GZV1 360 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 R3HDMLQ9H3Y0 253 aa12.77□□□□□ -0.37
RFFL-208ENST00000581039 APAF1O14727 1248 aa12.76□□□□□ -0.37
RFFL-208ENST00000581039 IGKV5-2P06315 115 aa12.76□□□□□ -0.37
RFFL-208ENST00000581039 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.76□□□□□ -0.37
RFFL-208ENST00000581039 ZNF804BA4D1E1 1349 aa12.76□□□□□ -0.37
RFFL-208ENST00000581039 MANSC4A6NHS7 340 aaPredicted RBP12.75□□□□□ -0.37
RFFL-208ENST00000581039 KCNJ4P48050 445 aa12.75□□□□□ -0.37
RFFL-208ENST00000581039 GTF2IP78347 998 aa12.75□□□□□ -0.37
RFFL-208ENST00000581039 DLGAP5Q15398 846 aa12.75□□□□□ -0.37
RFFL-208ENST00000581039 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
RFFL-208ENST00000581039 MPHOSPH8Q99549 860 aa12.75□□□□□ -0.37
RFFL-208ENST00000581039 DEFB129Q9H1M3 183 aa12.75□□□□□ -0.37
RFFL-208ENST00000581039 TRIM17Q9Y577 477 aa12.75□□□□□ -0.37
RFFL-208ENST00000581039 H7C1W4 665 aa12.74□□□□□ -0.37
RFFL-208ENST00000581039 PPP1R12BO60237 982 aaPredicted RBP12.74□□□□□ -0.37
RFFL-208ENST00000581039 CWF19L2Q2TBE0 894 aaKnown RBP12.74□□□□□ -0.37
RFFL-208ENST00000581039 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
RFFL-208ENST00000581039 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
RFFL-208ENST00000581039 ZBED3Q96IU2 234 aaPredicted RBP12.74□□□□□ -0.37
RFFL-208ENST00000581039 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
RFFL-208ENST00000581039 FZD1Q9UP38 647 aa12.74□□□□□ -0.37
RFFL-208ENST00000581039 PSME4Q14997 1843 aa12.74□□□□□ -0.37
RFFL-208ENST00000581039 NEURL1BA8MQ27 555 aa12.73□□□□□ -0.37
RFFL-208ENST00000581039 ZBTB48P10074 688 aaPredicted RBP12.73□□□□□ -0.37
RFFL-208ENST00000581039 ITGA6P23229 1130 aa12.73□□□□□ -0.37
RFFL-208ENST00000581039 KLRK1P26718 216 aa12.73□□□□□ -0.37
RFFL-208ENST00000581039 SUPT20HL1Q3ZLR7 823 aa12.73□□□□□ -0.37
RFFL-208ENST00000581039 OTUD7BQ6GQQ9 843 aa12.73□□□□□ -0.37
RFFL-208ENST00000581039 TSPYL6Q8N831 410 aa12.73□□□□□ -0.37
RFFL-208ENST00000581039 UNCXA6NJT0 531 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 MYO1BO43795 1136 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 MAP3K11Q16584 847 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 OTOP1Q7RTM1 612 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 ERO1AQ96HE7 468 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 WNK4Q96J92 1243 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 CD209Q9NNX6 404 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 PPP2R3BQ9Y5P8 575 aa12.72□□□□□ -0.37
RFFL-208ENST00000581039 CHRNDQ07001 517 aa12.71□□□□□ -0.37
RFFL-208ENST00000581039 GCKRQ14397 625 aa12.71□□□□□ -0.37
RFFL-208ENST00000581039 MTMR14Q8NCE2 650 aa12.71□□□□□ -0.37
RFFL-208ENST00000581039 CLMNQ96JQ2 1002 aa12.71□□□□□ -0.37
RFFL-208ENST00000581039 PLA2G12BQ9BX93 195 aa12.71□□□□□ -0.37
RFFL-208ENST00000581039 ANKRD18BA2A2Z9 1011 aa12.7□□□□□ -0.38
RFFL-208ENST00000581039 POTEFA5A3E0 1075 aa12.7□□□□□ -0.38
RFFL-208ENST00000581039 F8W031 263 aaPredicted RBP12.7□□□□□ -0.38
RFFL-208ENST00000581039 IGF2BP3O00425 579 aaKnown RBP eCLIP12.7□□□□□ -0.38
RFFL-208ENST00000581039 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
RFFL-208ENST00000581039 CSF1RP07333 972 aa12.7□□□□□ -0.38
RFFL-208ENST00000581039 IREB2P48200 963 aaKnown RBP12.7□□□□□ -0.38
RFFL-208ENST00000581039 HABP4Q5JVS0 413 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms