RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TTLL11Q8NHH1 800 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 MINPP1Q9UNW1 487 aa13.21□□□□□ -0.29
GGA3-210ENST00000580799 SLC34A2O95436 690 aa13.2□□□□□ -0.3
GGA3-210ENST00000580799 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
GGA3-210ENST00000580799 RASAL3Q86YV0 1011 aa13.2□□□□□ -0.3
GGA3-210ENST00000580799 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 GREM2Q9H772 168 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 LEMD3Q9Y2U8 911 aa13.19□□□□□ -0.3
GGA3-210ENST00000580799 NEURL1BA8MQ27 555 aa13.18□□□□□ -0.3
GGA3-210ENST00000580799 NF2P35240 595 aa13.18□□□□□ -0.3
GGA3-210ENST00000580799 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
GGA3-210ENST00000580799 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
GGA3-210ENST00000580799 WTIPA6NIX2 430 aaPredicted RBP13.17□□□□□ -0.3
GGA3-210ENST00000580799 H7C1W4 665 aa13.17□□□□□ -0.3
GGA3-210ENST00000580799 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
GGA3-210ENST00000580799 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
GGA3-210ENST00000580799 NBPF9Q3BBW0 867 aa13.17□□□□□ -0.3
GGA3-210ENST00000580799 CTU1Q7Z7A3 348 aaKnown RBP13.17□□□□□ -0.3
GGA3-210ENST00000580799 TSR2Q969E8 191 aaKnown RBP13.17□□□□□ -0.3
GGA3-210ENST00000580799 PLA2G12BQ9BX93 195 aa13.17□□□□□ -0.3
GGA3-210ENST00000580799 ANKRD2Q9GZV1 360 aa13.17□□□□□ -0.3
GGA3-210ENST00000580799 IL16Q14005 1332 aa13.16□□□□□ -0.3
GGA3-210ENST00000580799 WNT10BO00744 389 aa13.16□□□□□ -0.3
GGA3-210ENST00000580799 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
GGA3-210ENST00000580799 MYH16Q9H6N6 1097 aa13.16□□□□□ -0.3
GGA3-210ENST00000580799 ZNF804BA4D1E1 1349 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 CACNA1FO60840 1977 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 UBE2Q2LH0YL09 131 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 ITGA6P23229 1130 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 GCKRQ14397 625 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
GGA3-210ENST00000580799 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
GGA3-210ENST00000580799 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
GGA3-210ENST00000580799 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 FBXW7Q969H0 707 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 MPHOSPH8Q99549 860 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
GGA3-210ENST00000580799 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
GGA3-210ENST00000580799 CSF1RP07333 972 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 TM4SF4P48230 202 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 FLIIQ13045 1269 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
GGA3-210ENST00000580799 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
GGA3-210ENST00000580799 TTLL5Q6EMB2 1281 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 MOB2Q70IA6 237 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 G2E3Q7L622 706 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 TXNRD3Q86VQ6 643 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 LINS1Q8NG48 757 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
GGA3-210ENST00000580799 TNRC18O15417 2968 aaPredicted RBP13.13□□□□□ -0.31
GGA3-210ENST00000580799 KCNJ4P48050 445 aa13.13□□□□□ -0.31
GGA3-210ENST00000580799 SREBF2Q12772 1141 aa13.13□□□□□ -0.31
GGA3-210ENST00000580799 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
GGA3-210ENST00000580799 PRAMEF18Q5VWM3 479 aa13.13□□□□□ -0.31
GGA3-210ENST00000580799 ARMC9Q7Z3E5 817 aa13.13□□□□□ -0.31
GGA3-210ENST00000580799 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
GGA3-210ENST00000580799 SCAF8Q9UPN6 1271 aaKnown RBP13.13□□□□□ -0.31
GGA3-210ENST00000580799 ECM29Q5VYK3 1845 aa13.12□□□□□ -0.31
GGA3-210ENST00000580799 SASH1O94885 1247 aa13.12□□□□□ -0.31
GGA3-210ENST00000580799 CASP7P55210 303 aa13.12□□□□□ -0.31
GGA3-210ENST00000580799 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
GGA3-210ENST00000580799 ZBED3Q96IU2 234 aaPredicted RBP13.12□□□□□ -0.31
GGA3-210ENST00000580799 CFHR5Q9BXR6 569 aa13.12□□□□□ -0.31
GGA3-210ENST00000580799 A0A1B0GUL6 1792 aa13.12□□□□□ -0.31
GGA3-210ENST00000580799 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 TBC1D8O95759 1140 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 KLRK1P26718 216 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 SOX10P56693 466 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 GTF2IP78347 998 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 CHRNDQ07001 517 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
GGA3-210ENST00000580799 ZNF296Q8WUU4 475 aaPredicted RBP13.11□□□□□ -0.31
GGA3-210ENST00000580799 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 HPS5Q9UPZ3 1129 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 LAMB1P07942 1786 aa13.11□□□□□ -0.31
GGA3-210ENST00000580799 GPR25O00155 361 aa13.1□□□□□ -0.31
GGA3-210ENST00000580799 PTPN12Q05209 780 aaKnown RBP13.1□□□□□ -0.31
GGA3-210ENST00000580799 DLGAP5Q15398 846 aa13.1□□□□□ -0.31
GGA3-210ENST00000580799 LDLRAD1Q5T700 205 aa13.1□□□□□ -0.31
GGA3-210ENST00000580799 MTMR14Q8NCE2 650 aa13.1□□□□□ -0.31
GGA3-210ENST00000580799 PPP2R3BQ9Y5P8 575 aa13.1□□□□□ -0.31
GGA3-210ENST00000580799 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
GGA3-210ENST00000580799 ALDH1A1P00352 501 aa13.09□□□□□ -0.31
GGA3-210ENST00000580799 INHBEP58166 350 aa13.09□□□□□ -0.31
GGA3-210ENST00000580799 IFIT5Q13325 482 aaKnown RBP13.09□□□□□ -0.31
GGA3-210ENST00000580799 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
GGA3-210ENST00000580799 DEFB129Q9H1M3 183 aa13.09□□□□□ -0.31
GGA3-210ENST00000580799 IRS2Q9Y4H2 1338 aa13.09□□□□□ -0.31
GGA3-210ENST00000580799 UNCXA6NJT0 531 aa13.08□□□□□ -0.32
GGA3-210ENST00000580799 MYO1BO43795 1136 aa13.08□□□□□ -0.32
GGA3-210ENST00000580799 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
GGA3-210ENST00000580799 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
GGA3-210ENST00000580799 CCDC184Q52MB2 194 aa13.08□□□□□ -0.32
GGA3-210ENST00000580799 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
GGA3-210ENST00000580799 WDR63Q8IWG1 891 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms