RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 INTS5Q6P9B9 1019 aaKnown RBP12.06□□□□□ -0.48
SNX11-206ENST00000580219 C2CD5Q86YS7 1000 aa12.06□□□□□ -0.48
SNX11-206ENST00000580219 HHIPL1Q96JK4 782 aa12.06□□□□□ -0.48
SNX11-206ENST00000580219 ZBTB1Q9Y2K1 713 aa12.06□□□□□ -0.48
SNX11-206ENST00000580219 ANKRD31Q8N7Z5 1873 aa12.06□□□□□ -0.48
SNX11-206ENST00000580219 SRGAP3O43295 1099 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 CDC45O75419 566 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 RPS6KA4O75676 772 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 SEC24BO95487 1268 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 IGKV5-2P06315 115 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
SNX11-206ENST00000580219 NOGQ13253 232 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 GCKRQ14397 625 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 KIF1BPQ96EK5 621 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 EXOC6BQ9Y2D4 811 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 SALL3Q9BXA9 1300 aa12.05□□□□□ -0.48
SNX11-206ENST00000580219 USP42Q9H9J4 1324 aaKnown RBP12.05□□□□□ -0.48
SNX11-206ENST00000580219 TRPA1O75762 1119 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
SNX11-206ENST00000580219 PKN2Q16513 984 aaKnown RBP12.04□□□□□ -0.48
SNX11-206ENST00000580219 CWF19L2Q2TBE0 894 aaKnown RBP12.04□□□□□ -0.48
SNX11-206ENST00000580219 LHX8Q68G74 356 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 ERC1Q8IUD2 1116 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 STAP2Q9UGK3 403 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 ARFGEF2Q9Y6D5 1785 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
SNX11-206ENST00000580219 KIAA0100Q14667 2235 aaKnown RBP12.03□□□□□ -0.48
SNX11-206ENST00000580219 H0YIN7 160 aa12.03□□□□□ -0.48
SNX11-206ENST00000580219 CELF2O95319 508 aaKnown RBP12.03□□□□□ -0.48
SNX11-206ENST00000580219 C7P10643 843 aa12.03□□□□□ -0.48
SNX11-206ENST00000580219 IL6STP40189 918 aaPredicted RBP12.03□□□□□ -0.48
SNX11-206ENST00000580219 PDE1AP54750 535 aa12.03□□□□□ -0.48
SNX11-206ENST00000580219 MYD88Q99836 296 aa12.03□□□□□ -0.48
SNX11-206ENST00000580219 MUC3AQ02505 3323 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 SMARCA5O60264 1052 aaPredicted RBP12.02□□□□□ -0.49
SNX11-206ENST00000580219 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
SNX11-206ENST00000580219 TM4SF1P30408 202 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
SNX11-206ENST00000580219 CASC1Q6TDU7 716 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 BICDL1Q6ZP65 573 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 OTUD5Q96G74 571 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 SUCLG2Q96I99 432 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 PRDM6Q9NQX0 595 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 RNF186Q9NXI6 227 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 METRNQ9UJH8 293 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 CARMIL3Q8ND23 1372 aa12.02□□□□□ -0.49
SNX11-206ENST00000580219 BCORQ6W2J9 1755 aa12.01□□□□□ -0.49
SNX11-206ENST00000580219 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
SNX11-206ENST00000580219 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
SNX11-206ENST00000580219 MX1P20591 662 aa12.01□□□□□ -0.49
SNX11-206ENST00000580219 RBM25P49756 843 aaKnown RBP12.01□□□□□ -0.49
SNX11-206ENST00000580219 TBC1D9Q6ZT07 1266 aa12.01□□□□□ -0.49
SNX11-206ENST00000580219 RHPN1Q8TCX5 695 aa12.01□□□□□ -0.49
SNX11-206ENST00000580219 ZNF622Q969S3 477 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNX11-206ENST00000580219 C22orf23Q9BZE7 217 aa12.01□□□□□ -0.49
SNX11-206ENST00000580219 POTEFA5A3E0 1075 aa12□□□□□ -0.49
SNX11-206ENST00000580219 APBB1O00213 710 aa12□□□□□ -0.49
SNX11-206ENST00000580219 PSEN1P49768 467 aa12□□□□□ -0.49
SNX11-206ENST00000580219 MFAP1P55081 439 aaKnown RBP12□□□□□ -0.49
SNX11-206ENST00000580219 TRIM28Q13263 835 aaKnown RBP12□□□□□ -0.49
SNX11-206ENST00000580219 BECN1Q14457 450 aa12□□□□□ -0.49
SNX11-206ENST00000580219 RABL6Q3YEC7 729 aaPredicted RBP12□□□□□ -0.49
SNX11-206ENST00000580219 CCDC191Q8NCU4 936 aa12□□□□□ -0.49
SNX11-206ENST00000580219 OTUD7AQ8TE49 926 aaPredicted RBP12□□□□□ -0.49
SNX11-206ENST00000580219 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
SNX11-206ENST00000580219 KAZALD1Q96I82 304 aa12□□□□□ -0.49
SNX11-206ENST00000580219 BICC1Q9H694 974 aaKnown RBP12□□□□□ -0.49
SNX11-206ENST00000580219 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
SNX11-206ENST00000580219 ZNF330Q9Y3S2 320 aaPredicted RBP12□□□□□ -0.49
SNX11-206ENST00000580219 H7C1W4 665 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 SDSP20132 328 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 COL9A1P20849 921 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 TTLL7Q6ZT98 887 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 CWC25Q9NXE8 425 aaPredicted RBP11.99□□□□□ -0.49
SNX11-206ENST00000580219 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 EYSQ5T1H1 3165 aa11.99□□□□□ -0.49
SNX11-206ENST00000580219 TTC41PQ6P2S7 1318 aa11.98□□□□□ -0.49
SNX11-206ENST00000580219 A0A087WZG4 1122 aa11.98□□□□□ -0.49
SNX11-206ENST00000580219 CASP7P55210 303 aa11.98□□□□□ -0.49
SNX11-206ENST00000580219 KIF6Q6ZMV9 814 aa11.98□□□□□ -0.49
SNX11-206ENST00000580219 DZIP3Q86Y13 1208 aaKnown RBP11.98□□□□□ -0.49
SNX11-206ENST00000580219 CLASRPQ8N2M8 674 aaKnown RBP11.98□□□□□ -0.49
SNX11-206ENST00000580219 HDAC9Q9UKV0 1011 aa11.98□□□□□ -0.49
SNX11-206ENST00000580219 CACNA1AO00555 2505 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 MAP3K15Q6ZN16 1313 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
SNX11-206ENST00000580219 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
SNX11-206ENST00000580219 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 FBXO46Q6PJ61 603 aaPredicted RBP11.97□□□□□ -0.49
SNX11-206ENST00000580219 GPATCH3Q96I76 525 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 ISCA1Q9BUE6 129 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 ZNF408Q9H9D4 720 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 COPRSQ9NQ92 184 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
SNX11-206ENST00000580219 TBC1D2BQ9UPU7 963 aa11.97□□□□□ -0.49
SNX11-206ENST00000580219 H0YGN5 161 aa11.96□□□□□ -0.49
SNX11-206ENST00000580219 EPB41L2O43491 1005 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms