RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 TARSP26639 723 aaKnown RBP8.39□□□□□ -1.07
COPS3-216ENST00000579716 DPH6Q7L8W6 267 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 FAM35AQ86V20 835 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 CEP120Q8N960 986 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 CXorf38Q8TB03 319 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 CHMP7Q8WUX9 453 aaPredicted RBP8.39□□□□□ -1.07
COPS3-216ENST00000579716 EVI5LQ96CN4 794 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 USP21Q9UK80 565 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 COMMD10Q9Y6G5 202 aa8.39□□□□□ -1.07
COPS3-216ENST00000579716 hCG_2014768A0A024R1R8 64 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 MAP3K6O95382 1288 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 CPB1P15086 417 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 RTN1Q16799 776 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 NAALADL2Q58DX5 795 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 TRPM4Q8TD43 1214 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 TRIM44Q96DX7 344 aaPredicted RBP8.38□□□□□ -1.07
COPS3-216ENST00000579716 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 CHMP3Q9Y3E7 222 aa8.38□□□□□ -1.07
COPS3-216ENST00000579716 SBNO2Q9Y2G9 1366 aa8.37□□□□□ -1.07
COPS3-216ENST00000579716 PNISRQ8TF01 805 aaKnown RBP8.37□□□□□ -1.07
COPS3-216ENST00000579716 KLK14Q9P0G3 267 aa8.37□□□□□ -1.07
COPS3-216ENST00000579716 TFIP11Q9UBB9 837 aaKnown RBP8.37□□□□□ -1.07
COPS3-216ENST00000579716 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.37□□□□□ -1.07
COPS3-216ENST00000579716 GOLIM4O00461 696 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 ZNF16P17020 682 aaPredicted RBP8.36□□□□□ -1.07
COPS3-216ENST00000579716 RASA1P20936 1047 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 IBSPP21815 317 aaPredicted RBP8.36□□□□□ -1.07
COPS3-216ENST00000579716 PAX3P23760 479 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 MMP14P50281 582 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 CRTC2Q53ET0 693 aaPredicted RBP8.36□□□□□ -1.07
COPS3-216ENST00000579716 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
COPS3-216ENST00000579716 CCAR1Q8IX12 1150 aaKnown RBP8.36□□□□□ -1.07
COPS3-216ENST00000579716 TTC9Q92623 222 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 PMM1Q92871 262 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 FRRS1LQ9P0K9 344 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 RNF112Q9ULX5 631 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 NUB1Q9Y5A7 615 aa8.36□□□□□ -1.07
COPS3-216ENST00000579716 DLL1O00548 723 aa8.35□□□□□ -1.07
COPS3-216ENST00000579716 OPLAHO14841 1288 aa8.35□□□□□ -1.07
COPS3-216ENST00000579716 PARNO95453 639 aaKnown RBP8.35□□□□□ -1.07
COPS3-216ENST00000579716 SEC13P55735 322 aa8.35□□□□□ -1.07
COPS3-216ENST00000579716 MLLT1Q03111 559 aaPredicted RBP8.35□□□□□ -1.07
COPS3-216ENST00000579716 PTK7Q13308 1070 aa8.35□□□□□ -1.07
COPS3-216ENST00000579716 SETDB1Q15047 1291 aa8.35□□□□□ -1.07
COPS3-216ENST00000579716 DHX32Q7L7V1 743 aaKnown RBP8.35□□□□□ -1.07
COPS3-216ENST00000579716 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
COPS3-216ENST00000579716 NOP58Q9Y2X3 529 aaKnown RBP8.35□□□□□ -1.07
COPS3-216ENST00000579716 U2SURPO15042 1029 aaKnown RBP8.34□□□□□ -1.07
COPS3-216ENST00000579716 SASH3O75995 380 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 KIF4AO95239 1232 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 HSP90AA1P07900 732 aaKnown RBP8.34□□□□□ -1.07
COPS3-216ENST00000579716 IDH3AP50213 366 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 IGF2-ASQ6U949 168 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 KRT25Q7Z3Z0 450 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 DZIP1LQ8IYY4 767 aaKnown RBP8.34□□□□□ -1.07
COPS3-216ENST00000579716 PBXIP1Q96AQ6 731 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 QTRT2Q9H974 415 aaKnown RBP8.34□□□□□ -1.07
COPS3-216ENST00000579716 FAN1Q9Y2M0 1017 aa8.34□□□□□ -1.07
COPS3-216ENST00000579716 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
COPS3-216ENST00000579716 WDHD1O75717 1129 aaPredicted RBP8.33□□□□□ -1.08
COPS3-216ENST00000579716 ALX3O95076 343 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 COPB2P35606 906 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 PTPROQ16827 1216 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 CCDC96Q2M329 555 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 PRR23CQ6ZRP0 262 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 AMOTL1Q8IY63 956 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.33□□□□□ -1.08
COPS3-216ENST00000579716 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 PNMA5Q96PV4 448 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 USP20Q9Y2K6 914 aa8.33□□□□□ -1.08
COPS3-216ENST00000579716 TLDC2A0PJX2 215 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 IGFBP4P22692 258 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 DPYDQ12882 1025 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 HDAC1Q13547 482 aaPredicted RBP8.32□□□□□ -1.08
COPS3-216ENST00000579716 HIF1AQ16665 826 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 HFE2Q6ZVN8 426 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 CALR3Q96L12 384 aaKnown RBP8.32□□□□□ -1.08
COPS3-216ENST00000579716 TSPAN18Q96SJ8 248 aa8.32□□□□□ -1.08
COPS3-216ENST00000579716 GPLD1P80108 840 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 C4orf46Q504U0 113 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 ZNF280DQ6N043 979 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 KCNB2Q92953 911 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 SENP7Q9BQF6 1050 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 BCL2L13Q9BXK5 485 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 CHPF2Q9P2E5 772 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 FEZ2Q9UHY8 353 aaPredicted RBP8.31□□□□□ -1.08
COPS3-216ENST00000579716 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
COPS3-216ENST00000579716 EPB41L2O43491 1005 aaKnown RBP8.3□□□□□ -1.08
COPS3-216ENST00000579716 MICAL2O94851 1124 aa8.3□□□□□ -1.08
COPS3-216ENST00000579716 MED26O95402 600 aa8.3□□□□□ -1.08
COPS3-216ENST00000579716 DGKZQ13574 1117 aa8.3□□□□□ -1.08
COPS3-216ENST00000579716 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
COPS3-216ENST00000579716 WFDC8Q8IUA0 241 aa8.3□□□□□ -1.08
COPS3-216ENST00000579716 HINFPQ9BQA5 517 aa8.3□□□□□ -1.08
COPS3-216ENST00000579716 SMG9Q9H0W8 520 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms