RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 PSMD1Q99460 953 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 OSBPL3Q9H4L5 887 aa17.04■□□□□ 0.32
CSNK1D-209ENST00000578904 LTBP3Q9NS15 1303 aa17.03■□□□□ 0.32
CSNK1D-209ENST00000578904 TFCP2Q12800 502 aa17.03■□□□□ 0.32
CSNK1D-209ENST00000578904 TBC1D16Q8TBP0 767 aa17.03■□□□□ 0.32
CSNK1D-209ENST00000578904 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
CSNK1D-209ENST00000578904 AK9Q5TCS8 1911 aa17.03■□□□□ 0.32
CSNK1D-209ENST00000578904 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 PDE8BO95263 885 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 PDE1AP54750 535 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 VGLL2Q8N8G2 317 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 EYA3Q99504 573 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 ZNF277Q9NRM2 450 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 STAP2Q9UGK3 403 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 POLLQ9UGP5 575 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
CSNK1D-209ENST00000578904 PUM3Q15397 648 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-209ENST00000578904 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
CSNK1D-209ENST00000578904 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-209ENST00000578904 GPR101Q96P66 508 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-209ENST00000578904 SNAP23O00161 211 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 ZNF609O15014 1411 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 PPIP5K2O43314 1243 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
CSNK1D-209ENST00000578904 UBE4AQ14139 1066 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 ATP2B3Q16720 1220 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 MED23Q9ULK4 1368 aa17■□□□□ 0.31
CSNK1D-209ENST00000578904 SLC5A1P13866 664 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 AOC3Q16853 763 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 TTC22Q5TAA0 569 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 SKAP1Q86WV1 359 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
CSNK1D-209ENST00000578904 WTIPA6NIX2 430 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 RIMBP2O15034 1052 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 LMNB1P20700 586 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 KIAA2012Q0VF49 1180 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 CCDC158Q5M9N0 1113 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 CASC1Q6TDU7 716 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 LARGE2Q8N3Y3 721 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 LPIN2Q92539 896 aa16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-209ENST00000578904 SALL3Q9BXA9 1300 aa16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 ARAP2Q8WZ64 1704 aa16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 A0A1B0GUL7 405 aa16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 FGFR2P21802 821 aa16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 KLRK1P26718 216 aa16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 CCDC8Q9H0W5 538 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-209ENST00000578904 G3V3G9 751 aa16.96■□□□□ 0.31
CSNK1D-209ENST00000578904 PRELPP51888 382 aa16.96■□□□□ 0.31
CSNK1D-209ENST00000578904 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
CSNK1D-209ENST00000578904 RNF181Q9P0P0 153 aa16.96■□□□□ 0.31
CSNK1D-209ENST00000578904 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.3
CSNK1D-209ENST00000578904 C9orf131Q5VYM1 1079 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 ZNF804AQ7Z570 1209 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 TXNRD3Q86VQ6 643 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 NIM1KQ8IY84 436 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 OTUD7AQ8TE49 926 aaPredicted RBP16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 SBF1O95248 1867 aa16.95■□□□□ 0.3
CSNK1D-209ENST00000578904 COL4A5P29400 1685 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 TIMM10P62072 90 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 DOK7Q18PE1 504 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 DBNDD1Q9H9R9 158 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 CCDC88AQ3V6T2 1871 aa16.94■□□□□ 0.3
CSNK1D-209ENST00000578904 ATP5JP18859 108 aa16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 ADORA1P30542 326 aa16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 GYG1P46976 350 aa16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 XAGE2Q96GT9 111 aa16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-209ENST00000578904 DICER1Q9UPY3 1922 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 ECE2O60344 883 aa16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 CDC45O75419 566 aa16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 UQCRFS1P1P0C7P4 283 aa16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 PI4K2BQ8TCG2 481 aa16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 DBNDD2Q9BQY9 259 aa16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 COA1Q9GZY4 146 aa16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 GNL3LQ9NVN8 582 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-209ENST00000578904 LRRFIP1Q32MZ4 808 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-209ENST00000578904 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
CSNK1D-209ENST00000578904 RILPL2Q969X0 211 aa16.91■□□□□ 0.3
CSNK1D-209ENST00000578904 EVI5LQ96CN4 794 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms