RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 CASP7P55210 303 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 ZNF280AP59817 542 aaPredicted RBP11.43□□□□□ -0.58
GGA3-207ENST00000578896 RGMBQ6NW40 437 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 MOB2Q70IA6 237 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 SULF1Q8IWU6 871 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 C2orf69Q8N8R5 385 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 AGBL3Q8NEM8 1001 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 HHIPL1Q96JK4 782 aa11.43□□□□□ -0.58
GGA3-207ENST00000578896 IL16Q14005 1332 aa11.42□□□□□ -0.58
GGA3-207ENST00000578896 CACNA1FO60840 1977 aa11.42□□□□□ -0.58
GGA3-207ENST00000578896 ZNF316A6NFI3 1004 aaPredicted RBP11.42□□□□□ -0.58
GGA3-207ENST00000578896 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
GGA3-207ENST00000578896 FAM155AB1AL88 458 aaPredicted RBP11.42□□□□□ -0.58
GGA3-207ENST00000578896 IGHMBP2P38935 993 aaKnown RBP11.42□□□□□ -0.58
GGA3-207ENST00000578896 ZNF157P51786 506 aaPredicted RBP11.42□□□□□ -0.58
GGA3-207ENST00000578896 KIF23Q02241 960 aaPredicted RBP11.42□□□□□ -0.58
GGA3-207ENST00000578896 NBPF9Q3BBW0 867 aa11.42□□□□□ -0.58
GGA3-207ENST00000578896 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
GGA3-207ENST00000578896 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
GGA3-207ENST00000578896 MYOZ2Q9NPC6 264 aa11.42□□□□□ -0.58
GGA3-207ENST00000578896 TAF5LO75529 589 aa11.41□□□□□ -0.58
GGA3-207ENST00000578896 BRPF1P55201 1214 aaPredicted RBP11.41□□□□□ -0.58
GGA3-207ENST00000578896 NOGQ13253 232 aa11.41□□□□□ -0.58
GGA3-207ENST00000578896 DACT2Q5SW24 774 aa11.41□□□□□ -0.58
GGA3-207ENST00000578896 PODNQ7Z5L7 613 aa11.41□□□□□ -0.58
GGA3-207ENST00000578896 CHMP3Q9Y3E7 222 aa11.41□□□□□ -0.58
GGA3-207ENST00000578896 MED23Q9ULK4 1368 aa11.41□□□□□ -0.58
GGA3-207ENST00000578896 ZNF804BA4D1E1 1349 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 SASH1O94885 1247 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 CSF1RP07333 972 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 CHRNDQ07001 517 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 EPHA10Q5JZY3 1008 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 WDR63Q8IWG1 891 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 LINS1Q8NG48 757 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 MPHOSPH8Q99549 860 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 PLA2G12BQ9BX93 195 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 MCOLN1Q9GZU1 580 aa11.4□□□□□ -0.58
GGA3-207ENST00000578896 ZNF646O15015 1829 aaPredicted RBP11.39□□□□□ -0.59
GGA3-207ENST00000578896 AKAP11Q9UKA4 1901 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 TRPA1O75762 1119 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 KCNJ4P48050 445 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 GTF2IP78347 998 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 FOXO4P98177 505 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 BEND3Q5T5X7 828 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 TTLL5Q6EMB2 1281 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 ZNF594Q96JF6 807 aaPredicted RBP11.39□□□□□ -0.59
GGA3-207ENST00000578896 COA1Q9GZY4 146 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 MYH16Q9H6N6 1097 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 JAG2Q9Y219 1238 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 LEMD3Q9Y2U8 911 aa11.39□□□□□ -0.59
GGA3-207ENST00000578896 ANKRD18BA2A2Z9 1011 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 WNT10BO00744 389 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 PLIN1O60240 522 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 SLC10A3P09131 477 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 DGKZQ13574 1117 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 PRKG1Q13976 671 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 STRIP1Q5VSL9 837 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 KIAA0825Q8IV33 1275 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 CCDC102AQ96A19 550 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 CSRNP1Q96S65 589 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 ANKRD2Q9GZV1 360 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 RNF186Q9NXI6 227 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.38□□□□□ -0.59
GGA3-207ENST00000578896 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
GGA3-207ENST00000578896 CA12O43570 354 aa11.37□□□□□ -0.59
GGA3-207ENST00000578896 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
GGA3-207ENST00000578896 TTLL12Q14166 644 aaPredicted RBP11.37□□□□□ -0.59
GGA3-207ENST00000578896 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
GGA3-207ENST00000578896 LMBR1LQ6UX01 489 aa11.37□□□□□ -0.59
GGA3-207ENST00000578896 RASAL3Q86YV0 1011 aa11.37□□□□□ -0.59
GGA3-207ENST00000578896 CD209Q9NNX6 404 aa11.37□□□□□ -0.59
GGA3-207ENST00000578896 FZD1Q9UP38 647 aa11.37□□□□□ -0.59
GGA3-207ENST00000578896 ZNF609O15014 1411 aa11.36□□□□□ -0.59
GGA3-207ENST00000578896 F8W031 263 aaPredicted RBP11.36□□□□□ -0.59
GGA3-207ENST00000578896 IFIT5Q13325 482 aaKnown RBP11.36□□□□□ -0.59
GGA3-207ENST00000578896 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
GGA3-207ENST00000578896 OGFOD1Q8N543 542 aa11.36□□□□□ -0.59
GGA3-207ENST00000578896 CERS5Q8N5B7 392 aa11.36□□□□□ -0.59
GGA3-207ENST00000578896 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
GGA3-207ENST00000578896 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
GGA3-207ENST00000578896 PDE4DIPQ5VU43 2346 aa11.35□□□□□ -0.59
GGA3-207ENST00000578896 AOX1Q06278 1338 aa11.35□□□□□ -0.59
GGA3-207ENST00000578896 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
GGA3-207ENST00000578896 A0A1B0GUL6 1792 aa11.34□□□□□ -0.59
GGA3-207ENST00000578896 GRM8O00222 908 aa11.34□□□□□ -0.59
GGA3-207ENST00000578896 TAF7LQ5H9L4 462 aa11.34□□□□□ -0.59
GGA3-207ENST00000578896 SUCLG2Q96I99 432 aa11.34□□□□□ -0.59
GGA3-207ENST00000578896 PUS3Q9BZE2 481 aaKnown RBP11.34□□□□□ -0.59
GGA3-207ENST00000578896 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
GGA3-207ENST00000578896 MYO3BQ8WXR4 1341 aa11.34□□□□□ -0.59
GGA3-207ENST00000578896 PAPPA2Q9BXP8 1791 aa11.33□□□□□ -0.59
GGA3-207ENST00000578896 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
GGA3-207ENST00000578896 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
GGA3-207ENST00000578896 CCDC57Q2TAC2 916 aa11.33□□□□□ -0.6
GGA3-207ENST00000578896 LDHAL6AQ6ZMR3 332 aa11.33□□□□□ -0.6
GGA3-207ENST00000578896 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
GGA3-207ENST00000578896 ZBED3Q96IU2 234 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms