RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 G3V3G9 751 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 DCAF8Q5TAQ9 597 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ANKRD45Q5TZF3 282 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ARHGAP27Q6ZUM4 889 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 VGLL2Q8N8G2 317 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 TBC1D16Q8TBP0 767 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 RTFDC1Q9BY42 306 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ZC3H12CQ9C0D7 883 aaKnown RBP13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ZNF609O15014 1411 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 TIAM2Q8IVF5 1701 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 LTBP3Q9NS15 1303 aa13.86□□□□□ -0.19
CDK5RAP3-210ENST00000578733 SASH1O94885 1247 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 IGHDP01880 384 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 IFIT2P09913 472 aaKnown RBP13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 FSTL1Q12841 308 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 TNNI3KQ59H18 835 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 GORABQ5T7V8 394 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 VPS37DQ86XT2 251 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 JMYQ8N9B5 988 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 NEUROD6Q96NK8 337 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 FPGT-TNNI3KV9GXZ4 949 aa13.85□□□□□ -0.19
CDK5RAP3-210ENST00000578733 SNED1Q8TER0 1413 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 OLFM4Q6UX06 510 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 ZNF804AQ7Z570 1209 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 AACSQ86V21 672 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
CDK5RAP3-210ENST00000578733 PPIP5K2O43314 1243 aa13.83□□□□□ -0.2
CDK5RAP3-210ENST00000578733 FGFR2P21802 821 aa13.83□□□□□ -0.2
CDK5RAP3-210ENST00000578733 CCDC158Q5M9N0 1113 aa13.83□□□□□ -0.2
CDK5RAP3-210ENST00000578733 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
CDK5RAP3-210ENST00000578733 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
CDK5RAP3-210ENST00000578733 POLLQ9UGP5 575 aa13.83□□□□□ -0.2
CDK5RAP3-210ENST00000578733 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 IARSP41252 1262 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 C15orf52Q6ZUT6 534 aaKnown RBP13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 JDP2Q8WYK2 163 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 NMRK2Q9NPI5 230 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 KDM2BQ8NHM5 1336 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 MYH7P12883 1935 aa13.82□□□□□ -0.2
CDK5RAP3-210ENST00000578733 NFKBIEO00221 500 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 SMARCA5O60264 1052 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 LMNB1P20700 586 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 HIBADHP31937 336 aaKnown RBP13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 NUCB1Q02818 461 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 COL13A1Q5TAT6 717 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 NIM1KQ8IY84 436 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 XAGE2Q96GT9 111 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 COA1Q9GZY4 146 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
CDK5RAP3-210ENST00000578733 AKAP11Q9UKA4 1901 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 UQCRFS1P1P0C7P4 283 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 PRELPP51888 382 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 TIMM10P62072 90 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 AOC3Q16853 763 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 TTC39AQ5SRH9 613 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 TNS4Q8IZW8 715 aa13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 EAF2Q96CJ1 260 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 CCDC8Q9H0W5 538 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP3-210ENST00000578733 SEMA3EO15041 775 aa13.79□□□□□ -0.2
CDK5RAP3-210ENST00000578733 ERC2O15083 957 aa13.79□□□□□ -0.2
CDK5RAP3-210ENST00000578733 RASSF7Q02833 373 aa13.79□□□□□ -0.2
CDK5RAP3-210ENST00000578733 PODNQ7Z5L7 613 aa13.79□□□□□ -0.2
CDK5RAP3-210ENST00000578733 LNPKQ9C0E8 428 aa13.79□□□□□ -0.2
CDK5RAP3-210ENST00000578733 SCN9AQ15858 1988 aa13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 GYG1P46976 350 aa13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 CCDC102BQ68D86 513 aa13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 SLC51AQ86UW1 340 aa13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 FAM84BQ96KN1 310 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 GPR101Q96P66 508 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 DBNDD2Q9BQY9 259 aa13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 DBNLQ9UJU6 430 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 TTC41PQ6P2S7 1318 aa13.78□□□□□ -0.2
CDK5RAP3-210ENST00000578733 SNAP23O00161 211 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 ECE2O60344 883 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 PCNTO95613 3336 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 MX1P20591 662 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 EIF6P56537 245 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 C9orf131Q5VYM1 1079 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 FBXO33Q7Z6M2 555 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 DOCK2Q92608 1830 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 ZNF512BQ96KM6 892 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 ECHDC1Q9NTX5 307 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 RNF181Q9P0P0 153 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 DENND2AQ9ULE3 1009 aa13.77□□□□□ -0.21
CDK5RAP3-210ENST00000578733 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms